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2020-10-06gnu: r-lsei: Update to 1.3-0....* gnu/packages/cran.scm (r-lsei): Update to 1.3-0. Ricardo Wurmus
2020-10-06gnu: r-usethis: Update to 1.6.3....* gnu/packages/cran.scm (r-usethis): Update to 1.6.3. Ricardo Wurmus
2020-10-06gnu: r-sjplot: Update to 2.8.5....* gnu/packages/cran.scm (r-sjplot): Update to 2.8.5. Ricardo Wurmus
2020-10-06gnu: r-effectsize: Update to 0.3.3....* gnu/packages/cran.scm (r-effectsize): Update to 0.3.3. Ricardo Wurmus
2020-10-06gnu: r-emmeans: Update to 1.5.1....* gnu/packages/cran.scm (r-emmeans): Update to 1.5.1. Ricardo Wurmus
2020-10-06gnu: r-multcomp: Update to 1.4-14....* gnu/packages/cran.scm (r-multcomp): Update to 1.4-14. Ricardo Wurmus
2020-10-06gnu: r-sandwich: Update to 3.0-0....* gnu/packages/cran.scm (r-sandwich): Update to 3.0-0. Ricardo Wurmus
2020-10-06gnu: r-deriv: Update to 4.1.0....* gnu/packages/cran.scm (r-deriv): Update to 4.1.0. Ricardo Wurmus
2020-10-06gnu: r-sjlabelled: Update to 1.1.7....* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.7. Ricardo Wurmus
2020-10-06gnu: r-insight: Update to 0.9.6....* gnu/packages/cran.scm (r-insight): Update to 0.9.6. Ricardo Wurmus
2020-10-06gnu: r-bibtex: Update to 0.4.2.3....* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.3. Ricardo Wurmus
2020-10-06gnu: r-openxlsx: Update to 4.2.2....* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.2. Ricardo Wurmus
2020-10-06gnu: r-import: Update to 1.2.0....* gnu/packages/cran.scm (r-import): Update to 1.2.0. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-10-06gnu: r-trend: Update to 1.1.4....* gnu/packages/cran.scm (r-trend): Update to 1.1.4. Ricardo Wurmus
2020-10-06gnu: r-statnet-common: Update to 4.4.1....* gnu/packages/cran.scm (r-statnet-common): Update to 4.4.1. [propagated-inputs]: Add r-rle. Ricardo Wurmus
2020-10-06gnu: r-tinytex: Update to 0.26....* gnu/packages/cran.scm (r-tinytex): Update to 0.26. Ricardo Wurmus
2020-10-06gnu: r-xfun: Update to 0.18....* gnu/packages/cran.scm (r-xfun): Update to 0.18. Ricardo Wurmus
2020-10-06gnu: r-seriation: Update to 1.2-9....* gnu/packages/cran.scm (r-seriation): Update to 1.2-9. Ricardo Wurmus
2020-10-06gnu: r-dtw: Update to 1.22-3....* gnu/packages/cran.scm (r-dtw): Update to 1.22-3. Ricardo Wurmus
2020-10-06gnu: r-vcd: Update to 1.4-8....* gnu/packages/cran.scm (r-vcd): Update to 1.4-8. Ricardo Wurmus
2020-10-06gnu: r-hardyweinberg: Update to 1.6.8....* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.8. Ricardo Wurmus
2020-10-06gnu: r-broom: Update to 0.7.1....* gnu/packages/cran.scm (r-broom): Update to 0.7.1. Ricardo Wurmus
2020-10-06gnu: r-psych: Update to 2.0.9....* gnu/packages/cran.scm (r-psych): Update to 2.0.9. Ricardo Wurmus
2020-10-06gnu: r-lava: Update to 1.6.8....* gnu/packages/cran.scm (r-lava): Update to 1.6.8. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-10-06gnu: r-getoptlong: Update to 1.0.3....* gnu/packages/cran.scm (r-getoptlong): Update to 1.0.3. Ricardo Wurmus
2020-10-06gnu: r-htmltable: Update to 2.1.0....* gnu/packages/cran.scm (r-htmltable): Update to 2.1.0. Ricardo Wurmus
2020-10-06gnu: r-htmlwidgets: Update to 1.5.2....* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.5.2. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-10-06gnu: r-rticles: Update to 0.16....* gnu/packages/cran.scm (r-rticles): Update to 0.16. Ricardo Wurmus
2020-10-06gnu: r-fhtest: Update to 1.5....* gnu/packages/bioconductor.scm (r-fhtest): Update to 1.5. Ricardo Wurmus
2020-10-06gnu: r-interval: Update to 1.1-0.7....* gnu/packages/bioconductor.scm (r-interval): Update to 1.1-0.7. Ricardo Wurmus
2020-10-06gnu: r-activedriverwgs: Update to 1.1.1....* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.1. Ricardo Wurmus
2020-10-06gnu: Add r-slider....* gnu/packages/cran.scm (r-slider): New variable. Ricardo Wurmus
2020-10-06gnu: Add r-warp....* gnu/packages/cran.scm (r-warp): New variable. Ricardo Wurmus
2020-10-06gnu: Add r-rle....* gnu/packages/cran.scm (r-rle): New variable. Ricardo Wurmus
2020-10-05build: Use a 'guile' executable that doesn't warn about locales....This gets rid of: guile: warning: failed to install locale when running the 'guix' command on a foreign distro where 'GUIX_LOCPATH' isn't set. * Makefile.am (pkglibexec_PROGRAMS, guile_SOURCES, guile_LDADD) (guile_CFLAGS): New variables. (install-exec-hook): New target. (AUX_FILES): Remove 'guile-launcher.c'. * configure.ac: Use 'GUILE_FLAGS'. Ludovic Courtès
2020-10-05self: Use a 'guile' that doesn't complain about locales....Since commit ba48895899a117d6ace2209c3f54411a4a989133, selected UTF-8 locales are bundled. However, because 'guix-command' is itself a Guile script, users would still see Guile's warning, particularly on foreign distros: $ LC_ALL=sdf guix foo guile: warning: failed to install locale hint: Consider installing the `glibc-utf8-locales' [...] User commands would print that warning, but more importantly, each invocation of 'guix substitute' would print it, even though 'guix-daemon.service' explicitly chooses "en_US.utf8", which is in 'glibc-utf8-locales'. This leads to confusion since users would keep seeing this message unless/until they realize they also need to install 'glibc-utf8-locales' in root's profile. This patch gets rid of "guile: warning: ..." for a guix-pulled 'guix' command. * guix/self.scm (specification->package): Add "gcc-toolchain". (quiet-guile): New procedure. (guix-command): Use it. * gnu/packages/aux-files/guile-launcher.c: New file. * Makefile.am (AUX_FILES): Add it. Ludovic Courtès
2020-10-05gnu: rust-time-0.1: Update to 0.1.43....* gnu/packages/crates-io.scm (rust-time-0.1): Update to 0.1.43. Nicolas Goaziou
2020-10-05gnu: rust-chrono-0.4: Update to 0.4.13....* gnu/packages/crates-io.scm (rust-chrono-0.4): Update to 0.4.13. Nicolas Goaziou
2020-10-05gnu: rust-base64-0: Update to 0.12.3....* gnu/packages/crates-io.scm (rust-base64-0): Update to 0.12.3. Nicolas Goaziou
2020-10-05gnu: swaks: Support IPv6....* gnu/packages/mail.scm (swaks)[inputs]: Add perl-io-socket-inet6 and perl-socket6. Tobias Geerinckx-Rice
2020-10-05gnu: guix: Update to 1.1.0-29.4e3ed9bad9....* gnu/packages/package-management.scm (guix): Update to 1.1.0-29.4e3ed9bad9. Jan (janneke) Nieuwenhuizen
2020-10-05services: gitolite: Install the rc file as gitolite's user....* gnu/services/version-control.scm (gitolite-activation): Install the rc file as gitolite's user. Julien Lepiller
2020-10-05services: guix: Add guix-build-coordinator-queue-builds-service-type....* gnu/services/guix.scm (<guix-build-coordinator-queue-builds-configuration>): New record type. (guix-build-coordinator-queue-builds-configuration, guix-build-coordinator-queue-builds-configuration?, guix-build-coordinator-queue-builds-configuration-package, guix-build-coordinator-queue-builds-configuration-user, guix-build-coordinator-queue-builds-coordinator, guix-build-coordinator-queue-builds-configuration-systems, guix-build-coordinator-queue-builds-configuration-system-and-targets, guix-build-coordinator-queue-builds-configuration-guix-data-service, guix-build-coordinator-queue-builds-configuration-processed-commits-file, guix-build-coordinator-queue-builds-shepherd-services, guix-build-coordinator-queue-builds-activation, guix-build-coordinator-queue-builds-account): New procedures. (guix-build-coordinator-queue-builds-service-type): New variable. * doc/guix.texi (Guix Services): Document it. Christopher Baines
2020-10-05services: guix: Add guix-build-coordinator-agent-service-type....* gnu/services/guix.scm (<guix-build-coordinator-agent-configuration>): New record type. (guix-build-coordinator-agent-configuration, guix-build-coordinator-agent-configuration?, guix-build-coordinator-agent-configuration-package, guix-build-coordinator-agent-configuration-user, guix-build-coordinator-agent-configuration-coordinator, guix-build-coordinator-agent-configuration-uuid), guix-build-coordinator-agent-configuration-password, guix-build-coordinator-agent-configuration-password-file, guix-build-coordinator-agent-configuration-systems, guix-build-coordinator-agent-configuration-max-parallel-builds, guix-build-coordinator-agent-configuration-derivation-substitute-urls, guix-build-coordinator-agent-configuration-non-derivation-substitute-urls, guix-build-coordinator-agent-shepherd-services, guix-build-coordinator-agent-activation, guix-build-coordinator-agent-account): New procedures. (guix-build-coordinator-agent-service-type): New variable. * doc/guix.texi (Guix Services): Document it. Christopher Baines
2020-10-05services: guix: Add guix-build-coordinator-service-type....* gnu/services/guix.scm (<guix-build-coordinator-configuration>): New record type. (guix-build-coordinator-configuration, guix-build-coordinator-configuration?, guix-build-coordinator-configuration-package, guix-build-coordinator-configuration-user, guix-build-coordinator-configuration-group, guix-build-coordinator-configuration-datastore-uri-string, guix-build-coordinator-configuration-agent-communication-uri-string, guix-build-coordinator-configuration-client-communication-uri-string, guix-build-coordinator-configuration-allocation-strategy, guix-build-coordinator-configuration-hooks, guix-build-coordinator-configuration-guile, make-guix-build-coordinator-start-script, guix-build-coordinator-shepherd-services, guix-build-coordinator-activation, guix-build-coordinator-account): New procedures. (guix-build-coordinator-service-type): New variable. * gnu/tests/guix.scm (%test-guix-build-coordinator): New variable. * doc/guix.texi (Guix Services): Document it. Christopher Baines
2020-10-05gnu: Add guix-build-coordinator....* gnu/packages/package-management.scm (guix-build-coordinator): New variable. Christopher Baines
2020-10-05gnu: guile-prometheus: Update to 0-1.8980f39....This revision supports cross-compilation, so guile is added to the native-inputs to enable this. * gnu/packages/guile-xyz.scm (guile-prometheus): Update to 0-1.8980f39. [native-inputs]: Add guile. Christopher Baines
2020-10-05gnu: knot: Remove obsolete configure flag....* gnu/packages/dns.scm (knot)[arguments]: Remove unused ‘--with-bash-completions’ configure flag. Tobias Geerinckx-Rice
2020-10-05gnu: knot: Snip more pregenerated nonsource....ypbody.c is generated from ypbody.rl by update-parser.sh, both of which are missing from the release tarball. Rather than add another git file to native-inputs, we now build from git and remove the generated files. This follows up on commit 2b73e50c31a61b5dcef35a1e4b9484d9dbcb0fbc, now that everyone's finished building it. * gnu/packages/dns.scm (knot)[source]: Use GIT-FETCH and GIT-FILE-NAME. [arguments]: Add ‘--enable-fast-parser’ to #:configure-flags. Invoke the in-tree update-parser.sh. [native-inputs]: Remove separate update-parser.sh origin. Add autoconf, automake, and libtool. Tobias Geerinckx-Rice
2020-10-05gnu: knot: Build the zone parsers from Ragel source....* gnu/packages/dns.scm (knot)[source]: Add snippet to remove upstream's pregenerated ‘sources’ [arguments]: Add an ‘update-parser’ phase. [native-inputs]: Add ragel and upstream update-parser.sh. Tobias Geerinckx-Rice