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2022-01-06upstream: Support updating and fetching 'git-fetch' origins.Sarah Morgensen
Updaters need to be modified to return 'git-reference' objects. This patch modifies the 'generic-git' and 'minetest' updater, but others might need to be modified as well. * guix/git.scm (git-reference->git-checkout): New procedure. * guix/upstream.scm (package-update/git-fetch): New procedure. (<upstream-source>)[urls]: Document it can be a 'git-reference'. (%method-updates): Add 'git-fetch' mapping. (update-package-source): Support 'git-reference' sources. (upstream-source-compiler/url-fetch): Split off from ... (upstream-source-compiler): ... this, and call ... (upstream-source-compiler/git-fetch): ... this new procedure if the URL field contains a 'git-reference'. * guix/import/git.scm (latest-git-tag-version): Always return two values and document that the tag is returned as well. (latest-git-release)[urls]: Use the 'git-reference' instead of the repository URL. * guix/import/minetest.scm (latest-minetest-release)[urls]: Don't wrap the 'git-reference' in a list. * tests/minetest.scm (upstream-source->sexp): Adjust to new convention. Co-authored-by: Maxime Devos <maximedevos@telenet.be> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-06refresh: Support non-tarball sources.Sarah Morgensen
* guix/scripts/refresh.scm (update-package): Use 'file-hash*' instead of 'port-sha256'. Rename TARBALL to OUTPUT. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-06import: Factorize file hashing.Sarah Morgensen
* guix/import/cran.scm (vcs-file?, file-hash): Remove procedures. (description->package): Use 'file-hash*' instead. * guix/import/elpa.scm (vcs-file?, file-hash): Remove procedures. (git-repository->origin, elpa-package->sexp): Use 'file-hash* instead'. * guix/import/go.scm (vcs-file?, file-hash): Remove procedures. (git-checkout-hash): Use 'file-hash*' instead. * guix/import/minetest.scm (file-hash): Remove procedure. (make-minetest-sexp): Use 'file-hash*' instead. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-06guix hash: Extract file hashing procedures.Sarah Morgensen
* guix/scripts/hash.scm (guix-hash)[vcs-file?] (nar-hash, default-hash): Extract hashing logic to... * guix/hash.scm (vcs-file?, file-hash*): ... these new procedures in this new file. Modified-by: Maxime Devos <maximedevos@telenet.be> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-06doc: Fix typo.Tobias Geerinckx-Rice
* doc/guix.texi (Build Utilities): Fix typo. Reported by Mortimer Cladwell <mbcladwell@gmail.com>
2022-01-06gnu: guix-build-coordinator: Update to 0-46.309fc55.Christopher Baines
* gnu/packages/package-management.scm (guix-build-coordinator): Update to 0-46.309fc55.
2022-01-06system: vm: Restore default RAM size to 512MB.Mathieu Othacehe
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Restore it.
2022-01-06gnu: python-intelhex: Update to 2.3.0.Mathieu Othacehe
* gnu/packages/python-xyz.scm (python-intelhex): Update to 2.3.0. [arguments]: Enable the tests.
2022-01-06services: gnome: Add udev rules.Mathieu Othacehe
Fixes: <https://issues.guix.gnu.org/32166>. * gnu/services/desktop.scm (gnome-packages, gnome-udev-rules): New procedures. (gnome-polkit-settings): Use the gnome-packages procedure. (gnome-desktop-service-type): Add an udev service extension.
2022-01-06gnu: gnome-settings-daemon: Fix udev directory.Mathieu Othacehe
* gnu/packages/gnome.scm (gnome-settings-daemon)[arguments] {#:configure-flags}: Fix the udev directory.
2022-01-06gnu: go-github-com-microcosm-cc-bluemonday: Adjust inputs.Efraim Flashner
* gnu/packages/golang.scm (go-github-com-microcosm-cc-bluemonday) [native-inputs]: Remove go-github-com-aymeric-douceur, go-github-com-gorillia-css. Move go-github-com-chris-ramon-douceur, go-glang-org-x-net ... [propagated-inputs]: ... to here.
2022-01-06gnu: r-tximeta: Update to 1.12.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.12.4.
2022-01-06gnu: r-tcgabiolinks: Update to 2.22.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.22.2.
2022-01-06gnu: r-biodb: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.2.
2022-01-06gnu: r-sushi: Update to 1.32.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.32.0.
2022-01-06gnu: r-bioassayr: Update to 1.32.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.32.1.
2022-01-06gnu: r-universalmotif: Update to 1.12.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.2.
2022-01-06gnu: r-cytolib: Update to 2.6.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.1.
2022-01-06gnu: r-clusterprofiler: Update to 4.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.1.
2022-01-06gnu: r-icobra: Update to 1.22.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.2.
2022-01-06gnu: r-destiny: Update to 3.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.0.
2022-01-06gnu: r-diffbind: Update to 3.4.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.3.
2022-01-06gnu: r-systempiper: Update to 2.0.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.5.
2022-01-06gnu: r-structuralvariantannotation: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.10.1.
2022-01-06gnu: r-genomicfeatures: Update to 1.46.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.3.
2022-01-06gnu: r-chipseeker: Update to 1.30.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.3.
2022-01-06gnu: r-biocparallel: Update to 1.28.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.3.
2022-01-06gnu: r-yapsa: Update to 1.20.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.20.1. [propagated-inputs]: Remove r-pmcmr; add r-pmcmrplus.
2022-01-06services: Document the full list of available NTP URLs.Leo Famulari
* gnu/services/networking.scm (%ntp-servers): List the URLs granted to us.
2022-01-06gnu: godot: Remove input labels.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm (godot)[inputs]: Remove input labels. [arguments]: Tweak accordingly.
2022-01-06gnu: godot: Update to 3.4.2.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm (godot): Update to 3.4.2. [arguments]: Don't explicitly return #t from phases.
2022-01-05gnu: linux-libre 4.4: Update to 4.4.298.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.298. (linux-libre-4.4-pristine-source): Update hash.
2022-01-05gnu: linux-libre 4.9: Update to 4.9.296.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.296. (linux-libre-4.9-pristine-source): Update hash.
2022-01-05gnu: linux-libre 4.14: Update to 4.14.261.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.261. (linux-libre-4.14-pristine-source): Update hash.
2022-01-05gnu: linux-libre 4.19: Update to 4.19.224.Leo Famulari
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.224. (linux-libre-4.19-pristine-source): Update hash.
2022-01-05gnu: linux-libre 5.4: Update to 5.4.170.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.170. (linux-libre-5.4-pristine-source): Update hash.
2022-01-05gnu: linux-libre 5.10: Update to 5.10.90.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.90. (linux-libre-5.10-pristine-source): Update hash.
2022-01-05gnu: linux-libre: Update to 5.15.13.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.13. (linux-libre-5.15-pristine-source): Update hash.
2022-01-06gnu: snapraid: Update to 12.0.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid): Update to 12.0.
2022-01-06gnu: snapraid: ‘Fix’ build.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid)[arguments]: Remove "--enable-valgrind" from #:configure-flags. [native-inputs]: Remove valgrind.
2022-01-06gnu: snapraid: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (snapraid)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: wimlib: Update to 1.13.5.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (wimlib): Update to 1.13.5.
2022-01-06gnu: borgmatic: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borgmatic)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: borgmatic: Update to 1.5.22.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borgmatic): Update to 1.5.22.
2022-01-06gnu: pan: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (pan)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: pan: Update to 0.149.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (pan): Update to 0.149. [arguments]: Don't explicitly return #t from phases. [inputs]: Upgrade gmime-2.6 to gmime.
2022-01-06gnu: xxhash: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/digest.scm (xxhash)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: xxhash: Update to 0.8.1.Tobias Geerinckx-Rice
* gnu/packages/digest.scm (xxhash): Update to 0.8.1. [arguments]: Add a new 'fix-man-page-links phase.
2022-01-06gnu: toybox: Use G-expressions.Tobias Geerinckx-Rice
* gnu/packages/busybox.scm (toybox)[arguments]: Rewrite as G-expressions.
2022-01-06gnu: toybox: Update to 0.8.6.Tobias Geerinckx-Rice
* gnu/packages/busybox.scm (toybox): Update to 0.8.6.
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