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2017-01-01build-system: cargo: Make Cargo.toml writeable....* guix/build/cargo-build-system.scm (configure): Make sure Cargo.toml is writeable before attempting modification. Problem reported by Danny Milosavljevic <dannym@scratchpost.org>. David Craven
2017-01-01gnu: Add propeller-development-suite....* gnu/packages/embedded.scm (propeller-development-suite): New variable. Ricardo Wurmus
2017-01-01gnu: Add spinsim....* gnu/packages/embedded.scm (spinsim): New variable. Ricardo Wurmus
2017-01-01gnu: Add spin2cpp....* gnu/packages/embedded.scm (spin2cpp): New variable. Ricardo Wurmus
2017-01-01gnu: Add propeller-load....* gnu/packages/embedded.scm (propeller-load): New variable. Ricardo Wurmus
2017-01-01gnu: Add openspin....* gnu/packages/embedded.scm (openspin): New variable. Ricardo Wurmus
2017-01-01gnu: Add propeller-toolchain....* gnu/packages/embedded.scm (propeller-toolchain): New variable. Ricardo Wurmus
2017-01-01gnu: Add proplib....* gnu/packages/embedded.scm (proplib): New variable. Ricardo Wurmus
2017-01-01gnu: Add propeller-gcc....* gnu/packages/embedded.scm (propeller-gcc): New variable. Ricardo Wurmus
2017-01-01gnu: Add propeller-binutils....* gnu/packages/embedded.scm (propeller-binutils): New variable. Ricardo Wurmus
2017-01-01gnu: Add dummy linker for propeller-elf....* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for propeller-elf. Ricardo Wurmus
2017-01-01gnu: clisp: Remove timestamps....* gnu/packages/lisp.scm (clisp)[arguments]: Add "remove-timestamps" phase to remove "__DATE__" and "__TIME__". Ricardo Wurmus
2017-01-01gnu: clisp: Use modify-phases syntax....* gnu/packages/lisp.scm (clisp)[arguments]: Use modify-phases syntax. Ricardo Wurmus
2017-01-01Update .mailmap....* .mailmap: Add new entries for Alex Sassmannshausen, Ben Woodcroft, Daniel Pimentel, David Hashe, George Clemmer, Ivan Vilata i Balaguer, Jeff Mickey, John J. Foerch, Marek Benc, Pjotr Prins, Raoul Jean Pierre Bonnal, Rene Saavedra, 宋文武, Stefan Reichör, Thomas Danckaert and Vincent Legoll. Alex Kost
2017-01-01gnu: manaplus: Update to 1.6.12.24....* gnu/packages/games.scm (manaplus): Update to 1.6.12.24. Alex Kost
2017-01-01gnu: python-dendropy: Update to 4.2.0....* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0. [source]: Remove patch. (python2-dendropy)[source]: Use the same source as python-dendropy. * gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Ben Woodcroft
2017-01-01gnu: diamond: Update to 0.8.31....* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.31. Ben Woodcroft
2016-12-31gnu: nagios: Update to 4.2.4 [fixes CVE-2016-{9565,9566}]....* gnu/packages/monitoring.scm (nagios): Update to 4.2.4. [native-inputs]: New field. Ludovic Courtès
2016-12-31Add 'guix copy'....* guix/scripts/copy.scm: New file. * guix/scripts/archive.scm (options->derivations+files): Export. * doc/guix.texi (Invoking guix copy): New node. * Makefile.am (MODULES) [HAVE_GUILE_SSH]: Add guix/scripts/copy.scm. * po/guix/POTFILES.in: Likewise. Ludovic Courtès
2016-12-31ssh: 'retrieve-files' detects remote export failures....* guix/ssh.scm (retrieve-files): Call 'lookahead-u8' and raise a '&message' condition when it returns EOF. Ludovic Courtès
2016-12-31ssh: 'send-files' returns the list of items sent....* guix/ssh.scm (send-files): Return MISSING. Ludovic Courtès
2016-12-31ssh: Allow transfers of complete closures....* guix/ssh.scm (store-export-channel, send-files) (file-retrieval-port, retrieve-files): Add #:recursive? parameter and honor it. Ludovic Courtès
2016-12-31git-download: Use a single download script for all derivations....That way, we have only one /gnu/store/…-git-download instead of one /gnu/store/…-PACKAGE-checkout-builder for each package. This is a followup to ced200328ca6337ac446e4557c645629e7d7a997. * guix/git-download.scm (git-fetch)[build]: Get the URL, commit, and recursive parameter using 'getenv'. Pass #:script-name and #:env-vars arguments to 'gexp->derivation'. Ludovic Courtès
2016-12-31gnu: python-graphql-relay: Update to 0.4.5....* gnu/packages/python.scm (python-graphql-relay): Update to 0.4.5. Tobias Geerinckx-Rice
2016-12-31gnu: python-freezegun: Update to 0.3.8....* gnu/packages/python.scm (python-freezegun): Update to 0.3.8. Tobias Geerinckx-Rice
2016-12-31gnu: python-ply: Update to 3.9....* gnu/packages/python.scm (python-ply): Update to 3.9. [source]: Use pypi-uri. Tobias Geerinckx-Rice
2016-12-31gnu: python-pyquery: Update to 1.2.17....* gnu/packages/python.scm (python-pyquery): Update to 1.2.17. Tobias Geerinckx-Rice
2016-12-31gnu: python-click-log: Update to 0.1.8....* gnu/packages/python.scm (python-click-log): Update to 0.1.8. Tobias Geerinckx-Rice
2016-12-31gnu: python-ndg-httpsclient: Update to 0.4.2....* gnu/packages/python.scm (python-ndg-httpsclient): Update to 0.4.2. Tobias Geerinckx-Rice
2016-12-31gnu: python-ipykernel: Update to 4.5.2....* gnu/packages/python.scm (python-ipykernel): Update to 4.5.2. Tobias Geerinckx-Rice
2016-12-31gnu: python-jupyter-core: Update to 4.2.1....* gnu/packages/python.scm (python-jupyter-core): Update to 4.2.1. Tobias Geerinckx-Rice
2016-12-31gnu: python2-fastlmm: Update to 0.2.26....* gnu/packages/python.scm (python2-fastlmm): Update to 0.2.26. Tobias Geerinckx-Rice
2016-12-31gnu: python-pytz: Update to 2016.10....* gnu/packages/python.scm (python-pytz): Update to 2016.10. Tobias Geerinckx-Rice
2016-12-31gnu: python-pyyaml: Update to 3.12....* gnu/packages/python.scm (python-pyyaml): Update to 3.12. [source]: Use pypi-uri. Tobias Geerinckx-Rice
2016-12-31gnu: python-pygments: Update to 2.1.3....* gnu/packages/python.scm (python-pygments): Update to 2.1.3. Tobias Geerinckx-Rice
2016-12-30gnu: tiled: Update to 0.18.0....* gnu/packages/game-development.scm (tiled): Update to 0.18.0. Kei Kebreau
2016-12-31hydra: Remove 'qemu-image' job....As per the discussion at <https://lists.gnu.org/archive/html/guix-devel/2016-12/msg01098.html>. * build-aux/hydra/gnu-system.scm (demo-os): Remove. (qemu-jobs): Remove 'qemu-image' job. * build-aux/hydra/demo-os.scm: Remove. Ludovic Courtès
2016-12-31gnu: mc: Partially fix absolute file paths....Partially fixes <http://bugs.gnu.org/25273>. * gnu/packages/mc.scm (mc)[arguments]: Add new phase 'fix-absolutism. This substitutes absolute file paths with functional file paths. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng0
2016-12-31gnu: pius: Update to 2.2.2-0.891687c....* gnu/packages/gnupg.scm (pius): Update to 2.2.2-0.891687c. [inputs]: Change GNUPG-2.0 to GNUPG (2.1). Signed-off-by: Ludovic Courtès <ludo@gnu.org> Troy Sankey
2016-12-31Add (guix ssh) module....* guix/scripts/offload.scm (connect-to-remote-daemon) (store-import-channel, store-export-channel, send-files) (retrieve-files): Move to (guix ssh). (nonce): Add optional 'name' parameter and use it. (retrieve-files*): New procedure. (transfer-and-offload): Use it instead of 'retrieve-files', and add first parameter to 'send-files'. (assert-node-can-import): Likewise. (assert-node-can-export): Use 'retrieve-files' instead of 'store-export-channel'. * guix/ssh.scm: New file. * configure.ac: Use 'GUIX_CHECK_GUILE_SSH' and define 'HAVE_GUILE_SSH' Automake conditional. * Makefile.am (MODULES) [HAVE_GUILE_SSH]: Add guix/ssh.scm. Ludovic Courtès
2016-12-30gnu: libtermkey: Update to 0.19....* gnu/packages/terminals.scm (libtermkey): Update to 0.19. Co-authored-by: Leo Famulari <leo@famulari.name> José Miguel Sánchez García
2016-12-30gnu: libpng: Mention CVE-2016-10087....* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: Rename to ... * gnu/packages/patches/libpng-CVE-2016-10087.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust. * gnu/packages/image.scm (libpng/fixed)[source]: Use renamed patch. Leo Famulari
2016-12-30import: crate: Do not build when guile-json is not available....* Makefile.am (MODULES): Add 'guix/import/crate.scm' and 'guix/scripts/import/crate.scm' only when HAVE_GUILE_JSON. David Thompson
2016-12-30gnu: linux-libre@4.1: Update to 4.1.37....* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.37. Mark H Weaver
2016-12-30gnu: multiqc: Update to 0.9....Suggested by Raoul Bonnal <ilpuccio.febo@gmail.com>. * gnu/packages/bioinformatics.scm (multiqc): Update to 0.9. [origin]: Add patch. * gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft
2016-12-29gnu: elogind: Enable ACL support....* gnu/packages/freedesktop.scm (elogind) [inputs]: Add acl. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Chris Marusich
2016-12-29services: Add libmtp's udev rules to '%desktop-services'....Suggested by Chris Marusich <cmmarusich@gmail.com>. * gnu/services/desktop.scm (%desktop-services): Add 'mtp' service via call to 'simple-service'. Ludovic Courtès
2016-12-29gnu: mpd: Install systemd service files....* gnu/packages/mpd.scm (mpd)[arguments]: Add 'install-service-files' phase. Leo Famulari
2016-12-29gnu: r-genomicfeatures: Update to 1.26.2....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.26.2. Ricardo Wurmus
2016-12-29gnu: r-biostrings: Update to 2.42.1....* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.42.1. Ricardo Wurmus
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