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2019-12-15gnu: r-diffbind: Update to 2.14.0.•••* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.14.0. Ricardo Wurmus
2019-12-15gnu: r-qvalue: Update to 2.18.0.•••* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.18.0. Ricardo Wurmus
2019-12-15gnu: r-oligo: Update to 1.50.0.•••* gnu/packages/bioconductor.scm (r-oligo): Update to 1.50.0. Ricardo Wurmus
2019-12-15gnu: r-oligoclasses: Update to 1.48.0.•••* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.48.0. Ricardo Wurmus
2019-12-15gnu: r-geneplotter: Update to 1.64.0.•••* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.64.0. Ricardo Wurmus
2019-12-15gnu: r-reportingtools: Update to 2.26.0.•••* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.26.0. Ricardo Wurmus
2019-12-15gnu: r-regioner: Update to 1.18.0.•••* gnu/packages/bioconductor.scm (r-regioner): Update to 1.18.0. Ricardo Wurmus
2019-12-15gnu: r-hpar: Update to 1.28.0.•••* gnu/packages/bioconductor.scm (r-hpar): Update to 1.28.0. Ricardo Wurmus
2019-12-15gnu: r-annotate: Update to 1.64.0.•••* gnu/packages/bioconductor.scm (r-annotate): Update to 1.64.0. Ricardo Wurmus
2019-12-15gnu: r-affxparser: Update to 1.58.0.•••* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.58.0. Ricardo Wurmus
2019-12-15gnu: r-affycoretools: Update to 1.58.2.•••* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.2. Ricardo Wurmus
2019-12-15gnu: r-affycontam: Update to 1.44.0.•••* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.44.0. Ricardo Wurmus
2019-12-15gnu: r-affycompatible: Update to 1.46.0.•••* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.46.0. Ricardo Wurmus
2019-12-15gnu: r-affycomp: Update to 1.62.0.•••* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.62.0. Ricardo Wurmus
2019-12-15gnu: r-biocgenerics: Update to 0.32.0.•••* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.32.0. Ricardo Wurmus
2019-12-15gnu: r-depecher: Update to 1.2.0.•••* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.0. [arguments]: Remove field. [propagated-inputs]: Remove r-biocparallel; add r-fnn and r-robustbase. Ricardo Wurmus
2019-12-15gnu: Add r-cytoml.•••* gnu/packages/bioconductor.scm (r-cytoml): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-opencyto.•••* gnu/packages/bioconductor.scm (r-opencyto): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-flowstats.•••* gnu/packages/bioconductor.scm (r-flowstats): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-flowworkspace.•••* gnu/packages/bioconductor.scm (r-flowworkspace): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-rprotobuflib.•••* gnu/packages/bioconductor.scm (r-rprotobuflib): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-flowclust.•••* gnu/packages/bioconductor.scm (r-flowclust): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-flowviz.•••* gnu/packages/bioconductor.scm (r-flowviz): New variable. Ricardo Wurmus
2019-12-15gnu: r-rgraphviz: Update to 2.30.0.•••* gnu/packages/graph.scm (r-rgraphviz): Update to 2.30.0. Ricardo Wurmus
2019-12-15gnu: r-preprocesscore: Update to 1.48.0.•••* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.48.0. Ricardo Wurmus
2019-12-15gnu: Add r-knn-covertree.•••* gnu/packages/cran.scm (r-knn-covertree): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-ggplot-multistats.•••* gnu/packages/cran.scm (r-ggplot-multistats): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-ggcyto.•••* gnu/packages/bioconductor.scm (r-ggcyto): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-ncdfflow.•••* gnu/packages/bioconductor.scm (r-ncdfflow): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-cytolib.•••* gnu/packages/bioconductor.scm (r-cytolib): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-multidataset.•••* gnu/packages/bioconductor.scm (r-multidataset): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-biocversion.•••* gnu/packages/bioconductor.scm (r-biocversion): New variable. Ricardo Wurmus
2019-12-15gnu: Add r-qqman.•••* gnu/packages/cran.scm (r-qqman): New variable. Ricardo Wurmus
2019-12-15guix: Upgrade to Bioconductor 3.10.•••* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10. * guix/import/cran.scm (%bioconductor-version): Same. Ricardo Wurmus
2019-12-15gnu: Add r-idpmisc.•••* gnu/packages/cran.scm (r-idpmisc): New variable. Ricardo Wurmus
2019-12-15gnu: java-svg-salamander: Return #t from snippet.•••* gnu/packages/java.scm (java-svg-salamander)[origin]: Return #t from snippet. Björn Höfling
2019-12-14gnu: emacs-cider: Update home-page.•••* gnu/packages/emacs-xyz.scm (emacs-cider)[home-page]: Change to https://cider.mx/. Brett Gilio
2019-12-14gnu: emacs-cider: Update to 0.23.0.•••* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 0.23.0. [propagated-inputs]: Add emacs-seq, emacs-parseedn. Brett Gilio
2019-12-14gnu: Add emacs-parseedn.•••* gnu/packages/emacs-xyz.scm (emacs-parseedn): New variable. Brett Gilio
2019-12-14gnu: Add emacs-parseclj.•••* gnu/packages/emacs-xyz.scm (emacs-parseclj): New variable. Brett Gilio
2019-12-15gnu: Add gfortran-toolchain•••* gnu/packages/commencement.scm: (gfortran-toolchain): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Konrad Hinsen
2019-12-15gnu: bootloaders: Avoid #:select on (gnu packages …) module.•••* gnu/packages/bootloaders.scm: Remove use of #:select. Ludovic Courtès
2019-12-15base64: Do not use (rnrs).•••* guix/base64.scm: Remove #:use-module clauses for (rnrs) and (srfi srfi-13). Add other #:use-module clauses. (fxbit-field): Define as an alias for 'bit-field. (fx=?, fx+, mod): New aliases. (assert): New macro. Ludovic Courtès
2019-12-15challenge: Fix type mismatch when comparing to a local hash.•••* guix/scripts/challenge.scm (call-with-mismatches)[narinfo1]: When LOCAL-HASH is true, call 'narinfo-hash->sha256' and use 'bytevector=?' instead of 'string=?'. Ludovic Courtès
2019-12-14gnu: emacs-telega: Update to 0.5.3-1.•••* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.3-1. [version]: Correct the version number used in the package elisp code itself. Brett Gilio
2019-12-14gnu: Add htmlcxx.•••* gnu/packages/web.scm (htmlcxx): New variable. Alex Griffin
2019-12-14gnu: emacs-doom-themes: Update to 2.1.6-2.•••* gnu/packages/emacs-xyz.scm (emacs-doom-themes): Update to 2.1.6-2. [arguments]: Disable byte-compilation regarding issue in upstream. <https://github.com/hlissner/emacs-doom-themes/issues/314>. Brett Gilio
2019-12-14gnu: josm: Update to 15553.•••* gnu/packages/geo.scm (josm): Update to 15553. Julien Lepiller
2019-12-14gnu: Add u-boot-pine64-lts-bootloader.•••* gnu/bootloader/u-boot.scm (u-boot-pine64-lts-bootloader): New variable. Mathieu Othacehe
2019-12-14gnu: bootloaders: Fix make-u-boot-sunxi64-package cross-compilation.•••* gnu/packages/bootloaders.scm (make-u-boot-sunxi64-package)[arguments]: Search in native-inputs to fix cross-compilation. Mathieu Othacehe
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