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2021-03-09gnu: r-argparser: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-argparser): Update to 0.7.1.
2021-03-09gnu: r-cli: Update to 2.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-cli): Update to 2.3.1.
2021-03-09gnu: r-broom: Update to 0.7.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 0.7.5.
2021-03-09gnu: r-ipred: Update to 0.9-10.Ricardo Wurmus
* gnu/packages/cran.scm (r-ipred): Update to 0.9-10.
2021-03-09gnu: r-energy: Update to 1.7-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-energy): Update to 1.7-8. [propagated-inputs]: Add r-gsl.
2021-03-09gnu: r-rmpi: Update to 0.6-9.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmpi): Update to 0.6-9.1.
2021-03-09gnu: r-proxy: Update to 0.4-25.Ricardo Wurmus
* gnu/packages/cran.scm (r-proxy): Update to 0.4-25.
2021-03-09gnu: r-ggally: Update to 2.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggally): Update to 2.1.1.
2021-03-09gnu: r-ffbase: Update to 0.13.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ffbase): Update to 0.13.3.
2021-03-09gnu: r-pkgload: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.0.
2021-03-09gnu: r-ps: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ps): Update to 1.6.0.
2021-03-09gnu: r-partykit: Update to 1.2-13.Ricardo Wurmus
* gnu/packages/cran.scm (r-partykit): Update to 1.2-13.
2021-03-09gnu: r-rticles: Update to 0.19.Ricardo Wurmus
* gnu/packages/cran.scm (r-rticles): Update to 0.19.
2021-03-09gnu: r-waldo: Update to 0.2.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-waldo): Update to 0.2.5.
2021-03-09gnu: r-cachem: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-cachem): Update to 1.0.4.
2021-03-09gnu: r-wgcna: Update to 1.70-3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.70-3.
2021-03-09gnu: Add r-terra.Ricardo Wurmus
* gnu/packages/cran.scm (r-terra): New variable.
2021-03-09gnu: Add r-ggtext.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggtext): New variable.
2021-03-09gnu: Add r-gridtext.Ricardo Wurmus
* gnu/packages/cran.scm (r-gridtext): New variable.
2021-03-09gnu: Add r-palmerpenguins.Ricardo Wurmus
* gnu/packages/cran.scm (r-palmerpenguins): New variable.
2021-03-09gnu: Add r-rstpm2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rstpm2): New variable.
2021-03-09gnu: Add r-fastghquad.Ricardo Wurmus
* gnu/packages/cran.scm (r-fastghquad): New variable.
2021-03-09gnu: evisum: Update to 0.5.11.Efraim Flashner
* gnu/packages/enlightenment.scm (evisum): Update to 0.5.11.
2021-03-09gnu: vtk: Fix build failure.Felix Gruber
* gnu/packages/image-processing.scm (vtk): Fix build failure. [source]: Add patch to fix build failure with recent versions of freetype. * gnu/packages/patches/vtk-fix-freetypetools-build-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-03-09gnu: ruby-pstree: Update to 0.3.0.Efraim Flashner
* gnu/packages/ruby.scm (ruby-pstree): Update to 0.3.0.
2021-03-09weather: Call lookup-narinfos with a custom progress reporter.Christopher Baines
This means there's a useful progress bar when running guix weather. * guix/scripts/weather.scm (report-server-coverage): Pass #:make-progress-reporter to lookup-narinfos.
2021-03-09guix: substitutes: Make progress reporting configurable.Christopher Baines
Rather than always outputting to (current-error-port) in lookup-narinfos (which is called from within lookup-narinfos/diverse), take a procedure which should return a progress reporter, and defer any output to that. As this is now general purpose code, make the default behaviour to output nothing. Maintain the current behaviour of the substitute script by moving the progress reporter implementation there, and passing it in when calling lookup-narinfos/diverse. These changes should be generally useful, but I'm particularly looking at getting guix weather to do progress reporting differently, with this new flexibility. * guix/substitutes.scm (fetch-narinfos): Take a procedure to make a progress-reporter, and use that rather than the hardcoded behaviour. (lookup-narinfos): Add #:make-progress-reporter keyword argument, and pass this through to fetch-narinfos. (lookup-narinfos/diverse): Add a #:make-progress-reporter keyword argument, and pass this through to lookup-narinfos. * guix/scripts/substitute.scm (process-query): Pass a progress-reporter to lookup-narinfos/diverse.
2021-03-09gnu: emacs-php-mode: Update to 1.24.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-php-mode): Update to 1.24.0. [arguments]: Include "lisp/" directory, and add it to load path before byte-compiling.
2021-03-09gnu: Rename "t" to "t-todo-manager".Raghav Gururajan
* gnu/packages/task-management.scm (t): Rename to t-todo-manager. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-09gnu: xvfb-run: Fix syntax error.Ludovic Courtès
Error introduced in 07f77812c44aa3b7a6b963613b783da56110d2f0. * gnu/packages/xorg.scm (xvfb-run)[license]: Fix syntax.
2021-03-09gnu: guile-next: Reintroduce as a 3.0.x snapshot.Ludovic Courtès
* gnu/packages/guile.scm (guile-next): Rewrite as a 3.0.x snapshot.
2021-03-09gnu: xvfb-run: Add man page licence.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xvfb-run)[license]: Add gpl2+.
2021-03-09gnu: s-tui: Update to 1.1.1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (s-tui): Update to 1.1.1.
2021-03-09gnu: inxi-minimal: Update to 3.3.01-1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.01-1.
2021-03-09gnu: sigrok-cli: Update to 0.7.2.Tobias Geerinckx-Rice
* gnu/packages/electronics.scm (sigrok-cli): Update to 0.7.2.
2021-03-09gnu: lrzip: Update to 0.641.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (lrzip): Update to 0.641.
2021-03-09gnu: libime: Update to 1.0.4.Tobias Geerinckx-Rice
* gnu/packages/fcitx5.scm (libime): Update to 1.0.4.
2021-03-09gnu: libfastjson: Update to 0.99.9.Tobias Geerinckx-Rice
* gnu/packages/c.scm (libfastjson): Update to 0.99.9.
2021-03-09gnu: progress: Update to 0.16.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (progress): Update to 0.16.
2021-03-09gnu: Add xvfb-run.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xvfb-run): New public variable.
2021-03-09gnu: ppsspp: Update to 1.11.3.Tobias Geerinckx-Rice
* gnu/packages/emulators.scm (ppsspp): Update to 1.11.3.
2021-03-09gnu: solaar: Fix home page.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (solaar)[home-page]: Correct.
2021-03-09gnu: solaar: Update to 1.0.5.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (solaar): Update to 1.0.5.
2021-03-09gnu: solfege: Build with older texinfo.Efraim Flashner
The package failed to build with texinfo-6.7. * gnu/packages/music.scm (solfege)[native-inputs]: Replace texinfo with texinfo-5.
2021-03-09gnu: python-logwrap: Update to 8.2.0.post0.Efraim Flashner
* gnu/packages/python-xyz.scm (python-logwrap): Update to 8.2.0.post0. [arguments]: Disable tests. Replace 'check phase. [propagated-inputs]: Remove python-six, python-typing. [native-inputs]: Remove unzip, python-pytest-cov, python-pytest-runner. Add python-setuptools-scm, python-toml, python-wheel. [home-page]: Update to new upstream URI.
2021-03-09gnu: symengine: Fix build.Efraim Flashner
* gnu/packages/algebra.scm (symengine)[native-inputs]: Remove llvm. [arguments]: Adjust accordingly.
2021-03-09gnu: xygrib: Fix compiling with newer qt.Efraim Flashner
* gnu/packages/geo.scm (xygrib)[source]: Adjust snippet to add missing include header.
2021-03-09gnu: trim-galore: Update to 0.6.6.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (trim-galore): Update to 0.6.6.
2021-03-09gnu: bbmap: Update to 38.90.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bbmap): Update to 38.90.
2021-03-09gnu: rust-1.26: Remove aarch64-linux from the supported systems.Christopher Baines
Because this package is a transitive input to many rust packages, Cuirass is spending lots of time failing to build it on ci.guix.gnu.org. This change will hopefully help with that issue. * gnu/packages/rust.scm (rust-1.26)[supported-systems]: Remove aarch64-linux.
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