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2019-05-28gnu: r-car: Update to 3.0-3....* gnu/packages/statistics.scm (r-car): Update to 3.0-3. Ricardo Wurmus
2019-05-28gnu: r-fpc: Update to 2.2-1....* gnu/packages/statistics.scm (r-fpc): Update to 2.2-1. [propagated-inputs]: Remove r-trimcluster. Ricardo Wurmus
2019-05-28gnu: r-prabclus: Update to 2.2-7.1....* gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.1. Ricardo Wurmus
2019-05-28gnu: r-zoo: Update to 1.8-6....* gnu/packages/statistics.scm (r-zoo): Update to 1.8-6. Ricardo Wurmus
2019-05-28gnu: r-rmarkdown: Update to 1.13....* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.13. [propagated-inputs]: Add r-xfun. Ricardo Wurmus
2019-05-28gnu: r-evaluate: Update to 0.14....* gnu/packages/statistics.scm (r-evaluate): Update to 0.14. Ricardo Wurmus
2019-05-28self: Fix unquoting....This is a follow-up to commit dfc69e4b6d4bbc41a4d37b3cc6ea12adb34aaafa. * guix/self.scm (whole-package): Unquote %storedir in the daemon wrapper. Ricardo Wurmus
2019-05-28gnu: python-attrs: Update to 19.1.0....* gnu/packages/python-xyz.scm (python-attrs): Update to 19.1.0. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> h.nasajpour
2019-05-28gnu: python-flask: Update to 1.0.3....* gnu/packages/python-web.scm (python-flask): Update to 1.0.3. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> h.nasajpour
2019-05-28gnu: d-feet: Fix missing input and update to 0.3.14....* gnu/packages/gnome.scm (d-feet): Update to 0.3.14. [inputs]: Add hicolor-icon-theme since d-feet won't list anything without it. Pierre Neidhardt
2019-05-28gnu: guix: Update to 35d1354....* gnu/packages/package-management.scm (guix): Update to 35d1354. Ludovic Courtès
2019-05-27gnu: emacs-relint: Update to 1.8....* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.8. Nicolas Goaziou
2019-05-27gnu: emacs-xr: Update to 1.12....* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.12. Nicolas Goaziou
2019-05-27publish: Display the compression method and level in use....* guix/scripts/publish.scm (guix-publish): Use 'info' instead of 'format' for the initial message. When COMPRESSION is true, display the method and level in use. Ludovic Courtès
2019-05-27lzlib: 'lzread!' never returns more than it was asked for....Fixes a bug whereby 'lzread!' could return more than COUNT. * guix/lzlib.scm (lzread!): Rewrite in a semi-functional style. Ludovic Courtès
2019-05-27gnu: guix: Add dependency on lzlib....* gnu/packages/package-management.scm (guix)[inputs]: Add LZLIB. Ludovic Courtès
2019-05-27self: Add dependency on lzlib....* guix/self.scm (compiled-guix): Pass #:lzlib to 'make-config.scm'. (make-config.scm): Add #:lzlib and honor it. (specification->package): Add "lzlib". Ludovic Courtès
2019-05-27publish: Add support for lzip....* guix/scripts/publish.scm (show-help, %options): Support '-C METHOD' and '-C METHOD:LEVEL'. (default-compression): New procedure. (bake-narinfo+nar): Add lzip. (nar-response-port): Likewise. (string->compression-type): New procedure. (make-request-handler): Generalize /nar/gzip handler to handle /nar/lzip as well. * tests/publish.scm ("/nar/lzip/*"): New test. ("/*.narinfo with lzip compression"): New test. * doc/guix.texi (Invoking guix publish): Document it. (Requirements): Mention lzlib. Ludovic Courtès
2019-05-27utils: Support compression and decompression with lzip....* guix/utils.scm (lzip-port): New procedure. (decompressed-port, compressed-port, compressed-output-port): Add 'lzip case. * tests/utils.scm <top level>: Call 'test-compression/decompression' for 'lzip as well. Ludovic Courtès
2019-05-27utils: Test 'compressed-port' and 'decompressed-port' for both gzip and xz....* tests/utils.scm (test-compression/decompression): New procedure. <top level>: Call it for both 'xz and 'gzip. Ludovic Courtès
2019-05-27lzlib: Add 'make-lzip-input-port/compressed'....* guix/lzlib.scm (lzwrite!, make-lzip-input-port/compressed): New procedures. * tests/lzlib.scm ("make-lzip-input-port/compressed"): New test. * guix/tests.scm (%seed): Export. Ludovic Courtès
2019-05-27lzlib: Adjust 'lz-compress-read' docstring....* guix/lzlib.scm (lz-compress-read): The integer return can be zero; adjust docstring accordingly. Ludovic Courtès
2019-05-27gnu: r-shiny: Fix JavaScript minification....Fixes <https://bugs.gnu.org/35923>. * gnu/packages/cran.scm (r-shiny)[native-inputs]: Add uglify-js. Ricardo Wurmus
2019-05-27gnu: Add osmctools...* gnu/packages/geo.scm (osmctools): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Guillaume LE VAILLANT
2019-05-27gnu: go@1.4: Update to 1.4-bootstrap-20171003....* gnu/packages/golang.scm (go-1.4): Use the bootstrap branch that is still supported upstream. [version]: Update to 1.4-bootstrap-20171003. [arguments]: Remove obsolete fix for timezone test which is now included upstream. Don't manually disable cgo because it is disabled by default. Manually enable test suite because future releases will disable tests by default. Signed-off-by: Leo Famulari <leo@famulari.name> Alex Griffin
2019-05-27gnu: python-alembic: Update to 1.0.10....* gnu/packages/databases.scm (python-alembic): Update to 1.0.10. Danny Milosavljevic
2019-05-27doc: Update default value of terminal-outputs....* doc/guix.texi: (terminal-outputs) Update default value. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jakob L. Kreuze
2019-05-27gnu: tlp: Add required x86-energy-perf-policy input dependency....* gnu/packages/linux.scm (tlp) [inputs]: Add system specific x86-energy-perf-policy dependency. [arguments]<#:phases>['wrap]: Adjust bin-directory procedure to return #f on missing input, a guard against system specific input dependencies. Filter only strings in the path list. Reformat for-each block. Add x86-energy-perf-policy in bin-directory input-name list. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Stefan Stefanović
2019-05-27gnu: Add x86-energy-perf-policy....* gnu/packages/linux.scm (x86-energy-perf-policy): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Stefan Stefanović
2019-05-27gnu: MATE: Use mirror://mate/ in source URIs....* gnu/packages/mate.scm(MATE packages)[source](uri): Use "mirror://mate/" instead of "https://pub.mate-desktop.org/releases/" directly. Signed-off-by: Ludovic Courtès <ludo@gnu.org> guy fleury iteriteka
2019-05-26import: hackage: Fix Cabal test....* guix/import/hackage.scm (hackage->guix-package): Remove call to 'memoize'. (hackage->guix-package/m): New procedure. (hackage-recursive-import): Use it. * tests/hackage.scm ("hackage->guix-package test 6"): Adjust. Co-authored-by: Robert Vollmert <rob@vllmrt.net> Ludovic Courtès
2019-05-26discovery: 'all-modules' returns modules in path order....A particular effect of this is that if there are ambiguous packages in a directory specified with `-L module_dir` and the distribution, the version from `module_dir` will be loaded, which is usually what would be expected. (E.g. for `guix build` or `guix package -i`.) * guix/discovery.scm (all-modules): Return modules in path order. * tests/guix-package.sh: Test local definitions take precedence. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Robert Vollmert
2019-05-26self: 'guix-daemon' honors %localstatedir, %sysconfdir, and %storedir....Fixes <https://bugs.gnu.org/35874>. Reported by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>. Previously, the 'guix-daemon' program provided by 'guix pull' would systematically use default directory locations for these. * guix/self.scm (whole-package)[wrap]: Set GUIX_STATE_DIRECTORY, GUIX_CONFIGURATION_DIRECTORY, and NIX_STORE_DIR. Ludovic Courtès
2019-05-27gnu: you-get: Update to 0.4.1302....* gnu/packages/video.scm (you-get): Update to 0.4.1302. Alex Vong
2019-05-26gnu: linux-libre: Update to 5.1.5....* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.5. (%linux-libre-hash): Update hash. Mark H Weaver
2019-05-26gnu: linux-libre@4.19: Update to 4.19.46....* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.46. (%linux-libre-4.19-hash): Update hash. Mark H Weaver
2019-05-26gnu: linux-libre@4.14: Update to 4.14.122....* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.122. (%linux-libre-4.14-hash): Update hash. Mark H Weaver
2019-05-26gnu: linux-libre@4.9: Update to 4.9.179....* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.179. Mark H Weaver
2019-05-26gnu: linux-libre: Rename a patch....* gnu/packages/linux.scm (%linux-libre-arm-export-__sync_icache_dcache-patch): Remove the version from the file name, since it applies to multiple versions. Mark H Weaver
2019-05-26gnu: linux-libre-arm-generic: Move definition....* gnu/packages/linux.scm (linux-libre-arm-generic): Move the definition down, next to the other linux-libre-arm-generic-* packages. Mark H Weaver
2019-05-26gnu: vhba-module: Remove duplicate definition....This is a followup to commit e1f640db8fa2a3aee018ce80df47b37e245c4b52. * gnu/packages/linux.scm (vhba-module): Remove duplicate definition. Mark H Weaver
2019-05-26gnu: node: Update to 10.15.3....* gnu/packages/libevent.scm (libuv-1.19): Remove variable. * gnu/packages/node.scm (node): Update to 10.15.3. [source]: Use XZ-compressed tarball. [arguments]: Add #:test-target. Use DELETE-FILE instead of DELETE-IF-EXISTS. Remove obsolete test deletions. [inputs]: Change OPENSSL to OPENSSL-NEXT. Change LIBUV-1.19 to LIBUV. (node-lts): Remove variable. Marius Bakke
2019-05-26gnu: libevent: Update to 2.1.0....* gnu/packages/patches/libevent-2.1-dns-tests.patch, gnu/packages/patches/libevent-2.1-skip-failing-test.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/libevent.scm (libevent): Update to 2.1.10. [source](patches): Remove. Marius Bakke
2019-05-27gnu: youtube-dl: Update to 2019.05.20....* gnu/packages/video.scm (youtube-dl): Update to 2019.05.20. Signed-off-by: Alex Vong <alexvong1995@gmail.com> Alex Vong
2019-05-26gnu: ioquake: Build on all architectures....* gnu/packages/game-development.scm (ioquake)[supported-systems]: Remove field. Efraim Flashner
2019-05-26gnu: pigx-chipseq: Update to 0.0.41....* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.41. Ricardo Wurmus
2019-05-26import: hackage: Recognize "BSD-3-Clause" and "PublicDomain"....* guix/import/hackage.scm (string->license): Add two licenses. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Robert Vollmert
2019-05-26gnu: python-shapely: Update to 1.6.4.post2....* gnu/packages/python-xyz.scm (python-shapely): Update to 1.6.4.post2. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Brett Gilio
2019-05-26gnu: python-psutil: Update to 5.6.2....* gnu/packages/python-xyz.scm (python-psutil): Update to 5.6.2. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Brett Gilio
2019-05-26gnu: coq-equations: Update to 1.2....Signed-off-by: Marius Bakke <mbakke@fastmail.com> Dan Frumin