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2023-04-19tests: Fix texlive->guix-package test....The home page for the package had changed. * tests/texlive.scm ("texlive->guix-package"): Match the home-page and synopsis inexactly to avoid future similar breakages. Maxim Cournoyer
2023-04-19tests: Re-add debug output to a package tests....* tests/packages.scm ("fold-available-packages with/without cache"): Re-introduce debugging output. Maxim Cournoyer
2023-04-19gnu: r-dmrseq: Update to 1.18.1....* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.1. Ricardo Wurmus
2023-04-19gnu: r-beachmat: Update to 2.14.2....* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.14.2. Ricardo Wurmus
2023-04-19gnu: r-gdsfmt: Update to 1.34.1....* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.34.1. Ricardo Wurmus
2023-04-19gnu: r-ebimage: Update to 4.40.1....* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.40.1. Ricardo Wurmus
2023-04-19gnu: r-enrichplot: Update to 1.18.4....* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.18.4. Ricardo Wurmus
2023-04-19gnu: r-structuralvariantannotation: Update to 1.14.1....* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.14.1. Ricardo Wurmus
2023-04-19gnu: r-rhdf5: Update to 2.42.1....* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.42.1. Ricardo Wurmus
2023-04-19gnu: openmw-scenegraph: Fix build....* gnu/packages/graphics.scm (openmw-scenegraph)[outputs]: Only use 'out' output. [arguments]: Delete inherited 'copy-plugins phase. Efraim Flashner
2023-04-19gnu: repo2docker: Add missing inputs....* gnu/packages/jupyter.scm (repo2docker)[inputs]: Add python-iso8601, python-chardet. Efraim Flashner
2023-04-19gnu: kwin: Update skipped test list....* gnu/packages/kde-plasma.scm (kwin)[arguments]: Update custom 'check phase with new list of skipped tests. Efraim Flashner
2023-04-19gnu: kwin: Rewrite skipped tests to be more readable....* gnu/packages/kde-plasma.scm (kwin)[arguments]: Rewrite skipped tests in custom 'check phase to be easier to read. Efraim Flashner
2023-04-19gnu: emacs-osm: Do not mix home-page and origin....* gnu/packages/emacs-xyz.scm (emacs-osm)[source]<origin>: Do not use home-page value as origin. Nicolas Goaziou
2023-04-19gnu: emacs-osm: Update to 0.11....* gnu/packages/emacs-xyz.scm (emacs-osm): Update to 0.11. Nicolas Goaziou
2023-04-19gnu: emacs-marginalia: Update to 1.2....* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 1.2. Nicolas Goaziou
2023-04-19gnu: emacs-envrc: Add DIRENV as an input....* gnu/packages/emacs-xyz.scm (emacs-envrc)[arguments]<#:phases>: Set direnv executable location. <#:tests?, #:test-command>: Tentatively run tests, without success. At least, they do not complain "direnv" executable is nowhere to be found. [inputs]: Add DIRENV. Nicolas Goaziou
2023-04-19gnu: emacs-envrc: Update to 0.5....* gnu/packages/emacs-xyz.scm (emacs-envrc): Update to 0.5. Nicolas Goaziou
2023-04-19gnu: emacs-cape: Update to 0.15....* gnu/packages/emacs-xyz.scm (emacs-cape): Update to 0.15. Nicolas Goaziou
2023-04-19gnu: emacs-autothemer: Run tests....* gnu/packages/emacs-xyz.scm (emacs-autothemer)[arguments]: Run tests. Nicolas Goaziou
2023-04-19gnu: emacs-autothemer: Update to 0.2.17....* gnu/packages/emacs-xyz.scm (emacs-autothemer): Update to 0.2.17. Nicolas Goaziou
2023-04-19gnu: Add texlive-totpages....* gnu/packages/tex.scm (texlive-totpages): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Matthieu Lemerre
2023-04-19gnu: texlive-latex-lastpage: Replace with texlive-lastpage....* gnu/packages/tex.scm (texlive-lastpage): New variable. (texlive-latex-lastpage): Deprecate variable. Nicolas Goaziou
2023-04-19gnu: texlive-latex-totcount: Replace with texlive-totcount....* gnu/packages/tex.scm (texlive-totcount): New variable. (texlive-latex-totcount): Deprecate package. Nicolas Goaziou
2023-04-19gnu: texlive-latex-acronym: Replace with texlive-acronym....* gnu/packages/tex.scm (texlive-latex-acronym): Deprecate package. (texlive-acronym): New variable. Nicolas Goaziou
2023-04-19gnu: texlive-latex-bigfoot: Replace with texlive-bigfoot....* gnu/packages/tex.scm (texlive-bigfoot): New variable. (texlive-latex-bigfoot): Deprecate package. (texlive-pstool): Use new variable. Nicolas Goaziou
2023-04-19gnu: Add texlive-relsize....* gnu/packages/tex.scm (texlive-relsize): New variable. Nicolas Goaziou
2023-04-19gnu: Add texlive-ncctools....* gnu/packages/tex.scm (texlive-ncctools): New variable. Nicolas Goaziou
2023-04-19gnu: r-with-tests: Update to 4.2.3....* gnu/packages/statistics.scm (r-with-tests): Update to 4.2.3. Ricardo Wurmus
2023-04-19snippets: tempel: Simplify git-commit-mode detection....* etc/snippets/tempel/text-mode: Simplify git-commit-mode detection. Signed-off-by: Andrew Tropin <andrew@trop.in> Nicolas Graves
2023-04-19gnu: emacs-next: Update to 29.0.90....* gnu/packages/emacs.scm (emacs-next): Update to 29.0.90. Liliana Marie Prikler
2023-04-19gnu: qemu: Update to 7.2.1....* gnu/packages/virtualization.scm (qemu): Update to 7.2.1. Maxim Cournoyer
2023-04-19gnu: audacity: Update to 3.3.0-beta-1....* gnu/packages/audio.scm (audacity): Update to 3.3.0-beta-1. [source]: Delete trailing #t in snippet. [arguments]: Update fix-cmake-rpath phase. Reported-by: tschilptschilp23 on #guix. Maxim Cournoyer
2023-04-19gnu: remmina: Update to 1.4.29....* gnu/packages/vnc.scm (remmina): Update to 1.4.29. [inputs]: Add PYTHON-MINIMAL-WRAPPER. Co-authored-by: Ludovic Courtès <ludo@gnu.org> TakeV
2023-04-19gnu: usbutils: Use G-Expressions....* gnu/packages/linux.scm (usbutils): Use G-Expressions. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Bruno Victal
2023-04-19gnu: usbutils: Make package description different from synopsis....* gnu/packages/linux.scm (usbutils)[description]: Change package description. Signed-off-by: Ludovic Courtès <ludo@gnu.org> mikadoZero
2023-04-19gnu: Add kitsas....* gnu/packages/finance.scm (kitsas): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Saku Laesvuori
2023-04-19ssh: Silence remote daemon messages when sending store items....Fixes <https://issues.guix.gnu.org/61839>. Previously, when running 'guix-daemon --debug' on the remote machine, lots of debugging outputs would be printed to stderr; since the client wouldn't read it, we could eventually reach a deadlock where the 'guix repl' process would be stuck writing to stderr while the client is stuck waiting on its stdout. * guix/ssh.scm (store-import-channel)[import]: Parameterize 'current-build-output-port'. Ludovic Courtès
2023-04-19substitute: Download nar from another server upon ETIMEDOUT....Previously, 'guix substitute' would fail abruptly with something like: guix substitute: warning: while fetching https://ci.guix.gnu.org/nar/lzip/…-example: server is somewhat slow guix substitute: warning: try `--no-substitutes' if the problem persists guix substitute: error: connect*: Connection timed out substitution of /gnu/store/…-example failed * guix/scripts/substitute.scm (network-error?): Add ETIMEDOUT. Ludovic Courtès
2023-04-19services: agetty: 'term-console' succeeds by default....Previously, on a typical setup without "console=ttyS0" or similar in 'kernel-arguments', the 'term-console' Shepherd service would always be marked as failing to start. This is undesirable because it raises a false alarm: the service is expected to do nothing in this case. This patch instead marks it as succeeding and logs a message explaining it's doing nothing. * gnu/services/base.scm (agetty-shepherd-service): In 'start' method, succeed when TTY is #f and print a message. Ludovic Courtès
2023-04-19environment: Really auto-load (guix scripts pack)....Fixes a performance regression on cache hits introduced in b31ea797edb4f6e8c14e8fe790da1319607c5cb1, whereby (guix scripts pack) would be loaded eagerly during startup, leading hundreds of (gnu packages *) modules to be loaded. Fixes <https://issues.guix.gnu.org/62899>. * guix/scripts/environment.scm: Autoload (gnu build install). (%options): Add indirection when calling 'symlink-spec-option-parser' so that (guix scripts pack) is auto-loaded only when needed. Ludovic Courtès
2023-04-19gnu: Add converseen....* gnu/packages/image.scm (converseen): New variable. * gnu/packages/patches/converseen-hide-non-free-pointers.patch: * gnu/packages/patches/converseen-hide-updates-checks.patch: New files. * gnu/local.mk: Register files above. Nicolas Goaziou
2023-04-19gnu: python-anyio: Update to 3.6.2....* gnu/packages/python-xyz.scm (python-anyio): Update to 3.6.2. Maxim Cournoyer
2023-04-19gnu: font-meera-inimai: Use gexps and remove labels....* gnu/packages/fonts.scm (font-meera-inimai) [native-inputs]: Remove labels. [arguments]: Use gexps. Maxim Cournoyer
2023-04-19gnu: python-fonttools-full: Rename to python-fonttools....* gnu/packages/python-xyz.scm (python-fonttools): Rename to... (python-fonttools-minimal): ... this. (python-fonttools-full): Adjust references to base package. Rename to... (python-fonttools): ... this. (python-matplotlib): * gnu/packages/fontutils.scm (python-cu2qu) [propagated-inputs]: Rename python-fonttools-full to python-fonttools. (python-ufolib2, python-defcon-bootstrap): Likewise. * gnu/packages/pdf.scm (weasyprint): Likewise. * gnu/packages/fonts.scm (font-meera-inimai) Adjust for renamed python-fonttools-minimal. * gnu/packages/fontutils.scm (python-cffsubr): Likewise. (python-compreffor, python-cu2qu, python-fontmath, python-fontpens-bootstrap) (python-fontparts-bootstrap, python-glyphsets, python-mutatormath) (python-ufoprocessor, graphite2, python-ufolib2) (python-defcon-bootstrap): Likewise. * gnu/packages/graphics.scm (python-booleanoperations): Likewise. Maxim Cournoyer
2023-04-19gnu: python-fonttools: Update to 4.39.3....This should have been already merged but was left out in a conflict resolution. * gnu/packages/python-xyz.scm (python-fonttools): Update to 4.39.3. Maxim Cournoyer
2023-04-19gnu: python-scikit-build: Update to 0.17.1....* gnu/packages/python-xyz.scm (python-scikit-build): Update to 0.17.1. [source]: Update URI. [arguments]: Update check phase override. [native-inputs]: Add python-hatchling, python-hatch-fancy-pypi-readme and python-hatch-vcs. [propagated-inputs]: Add python-tomli. Maxim Cournoyer
2023-04-19gnu: Add python-hatch-fancy-pypi-readme....* gnu/packages/python-build.scm (python-hatch-fancy-pypi-readme): New variable. Maxim Cournoyer
2023-04-19gnu: gfeeds: Update to 2.2.0....* gnu/packages/syndication.scm (gfeeds): Update to 2.2.0. [phases]: Fix skip-icon-cache phase. Use search-input-file in wrap-gfeeds. Maxim Cournoyer
2023-04-19gnu: python-pytest-trio: Update to 0.8.0....* gnu/packages/python-check.scm (python-pytest-trio): Update to 0.8.0. [arguments]: New relax-requirements phase. Delete extraneous add-installed-pythonpath call. Disable two new tests. Maxim Cournoyer