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* gnu/packages/cran.scm (r-nistunits): New variable.
Change-Id: I66328b54045a3125e5f3033605be88e3a1b2646a
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* gnu/packages/bioconductor.scm (r-r4rna): New variable.
Change-Id: I1bde2a17b0ba4a97fa54161744f048dbfaf2217a
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* gnu/packages/bioconductor.scm (r-r3cseq): New variable.
Change-Id: Ib62db1415ef3988ccef88ad600192246964b4d84
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Fixes <https://issues.guix.gnu.org/65177>.
Reported by Adrien 'neox' Bourmault <neox@gnu.org>.
* gnu/packages/patches/lvm2-no-systemd.patch: New file.
* gnu/packages/linux.scm (lvm2)[source]: Apply patch.
* gnu/local.mk: Register new patch.
Signed-off-by: Simon Tournier <zimon.toutoune@gmail.com>
Change-Id: I6b9d583f5914cc127c067829b5891827c04608cb
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* gnu/packages/telephony.scm (coturn): Update to 4.6.2.
Change-Id: If0b46af1a034a72a49c00b1e2a871ea636d203f2
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This reverts commit b6e8d587c4551f0fd28fcef96f33909a8ab8e9df
pending investigation of a segfault reported by graywolf in #guix.
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This reverts commit 6d7e181ba18d11c92409a93936025fb46b9c8171.
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* gnu/packages/machine-learning.scm (python-ml-collections): New variable.
Change-Id: I9299fe4221f13d979266fccc7b9cdd96a8d6e678
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* gnu/packages/python-xyz.scm (python-dm-tree)[inputs]: Replace abseil-cpp
with static-abseil-cpp.
[arguments]: Reference static libraries.
Change-Id: I11b58ad907a3e59b98c28d6c2f6fb7bcc15be742
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* gnu/packages/cpp.scm (static-abseil-cpp): New variable.
(make-static-abseil-cpp): New procedure.
Change-Id: I0b0b17b31461baf1189d7c818a82c99baad253c1
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* gnu/packages/bittorrent.scm (transmission): Update to 4.0.4.
[synopsis]: Remove "marketing phrases".
Change-Id: Ibecdf14198ba926eea66ff5ba29ec05fbd27fde2
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/games.scm (cockatrice): Update to 2.9.0.
Change-Id: Ia963a45ff49af40295329fd99db0dd039e314b77
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/wm.scm (labwc): Update to 0.6.5.
[inputs]: Add librsvg.
Change-Id: I2812e78aa5ee6e2a19ed5e8756aac0e0f83610db
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/admin.scm (ansible): Update to 8.5.0.
Change-Id: I38ac84a0945f3ba10e13246cf8ae95c3795b52b3
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/python-xyz.scm (python-resolvelib-0.5): Delete
variable. This was only used by ansible-core which can now use the
newer version.
Change-Id: Ic40e21561807ed5faae466e13193892e4f9aa6ae
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/admin.scm (ansible-core): Update to 2.15.5.
[#:phases]<check>: Enable tests that now pass and choose
the right ansible-test to invoke.
[propagated-inputs]: Replace python-resolvelib-0.5 with python-resolvelib.
Change-Id: Ibda3222a16fefb1484affdb62e38a3a07ce61986
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/consort.scm (r-consort): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I37bae26b3271f2c8e4d73bb72e11bc475168b0f7
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* gnu/packages/python-xyz.scm (online-judge-tools): New variable.
* gnu/packages/patches/online-judge-tools.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I78315db15ca8205dff607e98388c404ede64fb60
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* gnu/packages/python-xyz.scm (python-online-judge-api-client): New variable.
* gnu/packages/patches/python-online-judge-api-client-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: If407a070a52e66c723d042217a5ff6e1589efce1
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* gnu/packages/databases.scm (aerich): New variable.
Change-Id: I322d619dc80c943d50e28a96ba74d276784ab8da
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/python-xyz.scm (python-ddlparse): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/video.scm (ffmpeg-normalize): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/video.scm (ffmpeg-progress-yield): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/bioinformatics.scm (r-voltron): New variable.
Change-Id: I5f70cf613bf2c26c4ca119483c9ad3b0beba6502
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* gnu/packages/dezyne.scm (dezyne): Update to 2.17.7.
Change-Id: I278e4e17f49b15600689cebda04298de6bbc8a65
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This release mitigates CVE-2023-44487.
* gnu/packages/web.scm (nghttp2-1.57): New variable.
(nghttp2)[replacement]: Use it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/system/file-systems.scm (%pseudo-file-system-types): Add xenfs.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/ci.scm (cuirass): Update to 1.2.0.
Change-Id: Iada634a9d66ea3bf1035084970cf560ff5303c28
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* gnu/packages/browser-extensions.scm (passff-host)[arguments]: Use
`patch-shebang` instead of wrong `substitute*`, add newline after
substitution.
Change-Id: I6cd1d681e9e84bdeb24943dfe1d85d996f1a262b
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* gnu/packages/emacs-xyz.scm (emacs-julia-mode): Update to 0.4-0.7a8c868.
[arguments]: Convert to list of G-Expressions.
Change-Id: I3d06dbe824ce989400d801118e8bca496ae4b3e2
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
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* gnu/packages/emacs-xyz.scm (emacs-julia-mode)[#:phases]: Add ‘fix-tests’.
Change-Id: I1da1077a7e7e077392458243b2d3cd44592ebd45
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
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* gnu/packages/game-development.scm (godot): Update to 4.1.2.
Change-Id: I358305245305c2cf31e40ce1d33f28c97c224b52
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* gnu/packages/emulators.scm (retroarch)[inputs]: Remove labels.
Change-Id: Ia536f4b529260dc8c0f91618e0fd1e207984942f
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* gnu/packages/emulators.scm (retroarch)[inputs]: Replace ffmpeg-4 with ffmpeg.
Change-Id: I8b2772e139fd884caa6b411afdcf1ccb849dbc28
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* gnu/packages/emulators.scm (retroarch)[inputs]: Add flac, glslang,
mbedtls-apache, openssl, spirv-headers and spirv-tools.
[arguments]: Add configure flags to disable bundled libraries.
Change-Id: I2a833da5e5b28469e4677b3c24608e71949308a7
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* gnu/packages/emulators.scm (retroarch): Update to 1.16.0.3.
Change-Id: Ied17b92bb416bd7e237ef883793015c96b01d2f8
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* gnu/packages/mail.scm (opensmtpd): Update to 7.4.0p0.
Change-Id: I5536b828eecd16f041ed9381b16bd7aa54158155
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* gnu/packages/linux.scm (deblob-scripts-6.5): Update hash.
Change-Id: If692586bac01369c63099cf8311c9a94e70cc106
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
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* gnu/packages/linux.scm (iotop): Update to 1.25.
Change-Id: I7ee64c3318f8fd7677c181d32b920dfcf84b1836
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* gnu/packages/gcc.scm (custom-gcc)[properties]: Add upstream name.
Change-Id: I30326dc7952b11451a86f7f026aa1a97364a89e4
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* guix/build-system/go.scm (default-gccgo): New variable.
(lower): Only use default-go when it is supported.
Change-Id: I30564d97703344df582accaf741f4fcd159b6be1
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* gnu/packages/crates-io.scm (gccgo-13): New variable.
Change-Id: I4b1ed0657518b9113a5ce89221189b9dd60f4347
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* gnu/packages/gcc.scm (gccgo-10, gccgo-11, gccgo-12): Add notes about
what version of is provided by these packages.
Change-Id: Id483319e606fdebe1820abeb7e129c580bf2c165
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* gnu/packages/upnp.scm (gerbera): New variable.
Change-Id: I8b63b16fe7587557b08835d3edd58054ebe78559
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* gnu/packages/parallel.scm (parallel): Update to 20231022.
Signed-off-by: Clément Lassieur <clement@lassieur.org>
Change-Id: I1af0cd5d61ebb4118d13dd0e2a56ea6b3d647c17
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* gnu/packages/browser-extensions.scm (passff-host)[arguments]: Refactor
builder.
Change-Id: I42cb5e6b4808a8b2025d20654c57392f79c01a5c
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* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.328.
(linux-libre-4.14-pristine-source): Update hash.
Signed-off-by: Leo Famulari <leo@famulari.name>
Change-Id: I7787d2ed4cac1afe2b9e988395c440355ce2edaf
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* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.297.
(linux-libre-4.19-pristine-source): Update hash.
Signed-off-by: Leo Famulari <leo@famulari.name>
Change-Id: I85840b2f7984d40ecfd09ea2603f36927cb953f3
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.259.
(linux-libre-5.4-pristine-source): Update hash.
Signed-off-by: Leo Famulari <leo@famulari.name>
Change-Id: Iddba0dfd309bedda70bb2e0f910354df352dc059
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* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.199.
(linux-libre-5.10-pristine-source): Update hash.
Signed-off-by: Leo Famulari <leo@famulari.name>
Change-Id: I79378d78d5feb2b2b7e60f473c522b04a72b85e9
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