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2018-07-05Update NEWS.Ludovic Courtès
2018-07-05doc: Update URL of the Emacs-Guix manual.Ludovic Courtès
* doc/htmlxref.cnf (EMACS_GUIX): Update URL.
2018-07-05doc: Mention translations of the manual.Ludovic Courtès
* doc/guix.texi (Top): Add note about l10n. * doc/htmlxref.cnf: Add "guix.fr".
2018-07-05tests: Skip 'guix-pack.sh'.Ludovic Courtès
This works around a regression introduced in commit 66e9944e078cbb9e0d618377dd6df6e639640efa while waiting for a proper fix. * tests/guix-pack.sh: Add "exit 77".
2018-07-05Update NEWS.Ludovic Courtès
2018-07-05gnu: pigx: Update to 0.0.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx): Update to 0.0.3.
2018-07-05gnu: arb: Update to 2.13.0.Andreas Enge
* gnu/packages/algebra.scm (arb): Update to 2.13.0.
2018-07-05gnu: Add r-rots.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rots): New variable.
2018-07-05gnu: Add r-glimma.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-glimma): New variable.
2018-07-05gnu: Add r-goseq.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-goseq): New variable.
2018-07-05gnu: Add r-ctc.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ctc): New variable.
2018-07-05gnu: Add r-genelendatabase.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genelendatabase): New variable.
2018-07-05gnu: Add r-argparse.Ricardo Wurmus
* gnu/packages/cran.scm (r-argparse): New variable.
2018-07-05gnu: Add r-findpython.Ricardo Wurmus
* gnu/packages/cran.scm (r-findpython): New variable.
2018-07-05gnu: r-getopt: Move from bioinformatics to cran.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-getopt): Move from here... * gnu/packages/cran.scm (r-getopt): ...to here.
2018-07-05gnu: Add r-goplot.Ricardo Wurmus
* gnu/packages/cran.scm (r-goplot): New variable.
2018-07-05gnu: Add r-biasedurn.Ricardo Wurmus
* gnu/packages/cran.scm (r-biasedurn): New variable.
2018-07-05pack: Use guile-for-build for the target system.Ludovic Courtès
Until now, running "guix pack -s i686-linux" on an x86_64-linux machine, for instance, would use an x86_64 guile for module derivations. This was OK until now, but would break when passing "--localstatedir" due to the introduction of guile-sqlite3: we'd be using the i686 guile-sqlite3 along with the x86_64 guile. * guix/scripts/pack.scm (guix-pack): Pass the 'system option from OPTS to 'package-derivation'.
2018-07-05nls: Update 'fr' translation.Julien Lepiller
2018-07-05doc: Update package count.Ludovic Courtès
* doc/guix.texi (Limitations): Update number.
2018-07-05doc: Mention ARM and AArch64 bootloaders.Ludovic Courtès
* doc/guix.texi (Bootloader Configuration): Mention ARM and AArch64. Add missing uses of @code.
2018-07-05doc: Improve UEFI/BIOS bootloader documentation.Ludovic Courtès
Partly fixes <https://bugs.gnu.org/30312>. * doc/guix.texi (Preparing for Installation): Add note on how to choose between UEFI and BIOS. (Using the Configuration System)[Bootloader]: New subsubsection. (Bootloader Configuration): Expound on the bootloader type and target. * gnu/system/examples/desktop.tmpl: Switch to UEFI. * gnu/system/examples/bare-bones.tmpl: Explicitly mention "legacy" and "BIOS" in the comments.
2018-07-05gnu: qtox: Update to 1.16.1.Rutger Helling
* gnu/packages/messaging.scm (qtox): Update to 1.16.1.
2018-07-05gnu: emacs-async: Update to 1.9.3.Tobias Geerinckx-Rice
* gnu/packages/emacs.scm (emacs-async): Update to 1.9.3. [source]: Update URI.
2018-07-05gnu: nml: Update to 0.4.5.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm (nml): Update to 0.4.5.
2018-07-05gnu: nml: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/game-development.scm (nml)[home-page]: Use HTTPS.
2018-07-05gnu: r-lava: Update to 1.6.2.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-lava): Update to 1.6.2.
2018-07-05gnu: r-broom: Update to 0.4.5.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-broom): Update to 0.4.5.
2018-07-05gnu: r-broom: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/cran.scm (r-broom)[home-page]: Use HTTPS.
2018-07-05Don't force colour in aliases.Tobias Geerinckx-Rice
* gnu/system/shadow.scm (default-skeletons): Substitute ‘--color=auto’ for ‘--color’ (which implies ‘=always’) in aliases. * doc/guix.texi (G-Expressions): Also adjust examples as that makes more sense.
2018-07-05gnu: gtkwave: Mark up description.Tobias Geerinckx-Rice
* gnu/packages/fpga.scm (gtkwave)[description]: Use @dfn.
2018-07-05gnu: exempi: Mark up description.Tobias Geerinckx-Rice
* gnu/packages/freedesktop.scm (exempi)[description]: Use @dfn.
2018-07-05gnu: keepalived: Update to 2.0.5.Tobias Geerinckx-Rice
* gnu/packages/cluster.scm (keepalived): Update to 2.0.5.
2018-07-05gnu: inxi: Update to 3.0.14-1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.14-1.
2018-07-04gnu: linux-libre: Update to 4.17.4.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.17.4. (%linux-libre-hash): Update hash.
2018-07-04gnu: linux-libre@4.14: Update to 4.14.53.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.53. (%linux-libre-4.14-hash): Update hash.
2018-07-04gnu: linux-libre@4.9: Update to 4.9.111.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.111.
2018-07-04gnu: linux-libre@4.4: Update to 4.4.139.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.139.
2018-07-04gnu: Remove linux-libre@4.1.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.1): Remove variable. * gnu/packages/aux-files/linux-libre/4.1-i686.conf, gnu/packages/aux-files/linux-libre/4.1-x86_64.conf: Delete files. * Makefile.am (AUX_FILES): Remove them.
2018-07-05gnu: pigx-scrnaseq: Update to 0.0.6.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 0.0.6. [arguments]: Remove "wrap-executable" phase.
2018-07-05services: mingetty: Use '--nohangup'.Ludovic Courtès
See the discussion at <https://lists.gnu.org/archive/html/guix-devel/2018-07/msg00049.html>. * gnu/services/base.scm (mingetty-shepherd-service): Pass "--nohangup" to mingetty.
2018-07-04system: Default .bashrc uses '--color=auto' for grep and ls.Ludovic Courtès
Reported by Tobias Geerinckx-Rice <me@tobias.gr> and Björn Höfling <bjoern.hoefling@bjoernhoefling.de>. * gnu/system/shadow.scm (default-skeletons)["bashrc"]: Use '--color=auto' instead of '--color'.
2018-07-04gnu: maven: Fix maven crash when compiling java8 code.Julien Lepiller
* gnu/packages/maven.scm (maven)[arguments]: Configure classloading properly instead of adding jars to maven's classpath.
2018-07-04gnu: maven-compat: Fix test failure.Julien Lepiller
* gnu/packages/maven.scm (maven-compat)[arguments]: Add recreate-removed-jar phase.
2018-07-04gnu: maven-artifact: Update to 3.5.4.Julien Lepiller
* gnu/packages/maven.scm (maven-artifact): Update to 3.5.4. (maven-core)[arguments]: Use new version.
2018-07-04gnu: maven-wagon-provider-api: Update to 3.1.0.Julien Lepiller
* gnu/packages/maven.scm (maven-wagon-provider-api): Update to 3.1.0.
2018-07-04gnu: java-plexus-compiler-api: Update to 2.8.4.Julien Lepiller
* gnu/packages/java.scm (java-plexus-compiler-api): Update to 2.8.4.
2018-07-04nls: Update 'fr' translation.Julien Lepiller
2018-07-04vm: Disable KVM on i386.Ludovic Courtès
* gnu/build/vm.scm (load-in-linux-vm): Disable KVM on i386.
2018-07-04gnu: ledger: Use HTTPS home page URI.Arun Isaac
* gnu/packages/finance.scm (ledger)[home-page]: Use HTTPS URI.
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