| Age | Commit message (Expand) | Author |
|---|
| 2024-01-31 | gnu: cl-command-line-args: Update to 0.1.0.•••* gnu/packages/lisp-xyz.scm (sbcl-command-line-args): Update to 0.1.0.
[inputs]: Add sbcl-charje.documentation.
Change-Id: Iadac4decc64f2333878dd5b106e1e82c33b40e30
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
| Charles |
| 2024-01-31 | maint: Add gnupg to the manifest.•••* manifest.scm: Add gnupg.
Change-Id: Id5e90f87e5c3a07aa3e49afa97cc0b6d3ce71b41
| Ludovic Courtès |
| 2024-01-31 | channels: ‘latest-channel-instances’ traverses user-provided channels first.•••Previously, ‘latest-channel-instances’ would perform a depth-first
traversal of channels. Since dependencies specified in ‘.guix-channel’
are usually less specific that those provided by the user, this would
lead to the use of instances corresponding to those less specific specs,
which in turn might declare dependencies that do not exist for the more
specific instances.
This commit changes ‘latest-channel-instances’ to perform a
breadth-first traversal, thereby giving user-supplied channels higher
precedence over dependencies found via ‘.guix-channel’.
Fixes <https://issues.guix.gnu.org/68822>.
* guix/channels.scm (latest-channel-instances)[ignore?]: Remove.
[instance-name, same-named?, more-specific?]: New procedures.
Rewrite as a breadth-first traversal using a regular loop.
* tests/channels.scm ("latest-channel-instances reads dependencies from most-specific instance"):
New test.
Change-Id: Iba518145cfd209f04293a56246dbfee3b714650b
| Ludovic Courtès |
| 2024-01-31 | channels: Tweak test.•••* tests/channels.scm ("latest-channel-instances excludes duplicate channel dependencies"):
Use ‘equal?’ rather than ‘string=?’ since we can get #f.
Change-Id: I437b9d7e23200cf0c98b1593e68b1d355bc2de01
| Ludovic Courtès |
| 2024-01-31 | gnu: torbrowser: Copy buildID from the official build.•••* gnu/packages/tor.scm (%moz-build-date): Update to 20240115174022.
Reported-by: André Batista <nandre@riseup.net>
Change-Id: Ia057d6efe9db9e04ece03d994ee226ecdbc6cc04
| Clément Lassieur |
| 2024-01-30 | Revert "gnu: Add minify."•••This reverts commit f8c2d8141efef4565d12d8247bade069889b720e.
Fixes: error: go-github-com-tdewolff-minify-v2: unbound variable
<https://ci.guix.gnu.org/eval/1086875/log/raw>
Change-Id: I26e02842980cf09e924ac1cae8f3a6421a005276
| Sharlatan Hellseher |
| 2024-01-30 | teams: go: Add golang-xyz.scm to scope.•••* etc/teams.scm (go): Add "gnu/packages/golang-xyz.scm".
Change-Id: I580eadf52b631c6582e256a2900786b53483a466
| Sharlatan Hellseher |
| 2024-01-30 | gnu: Add minify.•••* gnu/packages/web.scm (minify): New variable.
Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Co-authored-by: Hilton Chain <hako@ultrarare.space>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I7289c77a17f63501b6c7771606d396241333ac3a
| Thomas Ieong |
| 2024-01-30 | gnu: Add go-github-com-matryer-try.•••* gnu/packages/golang-check.scm (go-github-com-matryer-try): New variable.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: Ic354425938374fcd29e871a597da63a7a390cfa1
| Thomas Ieong |
| 2024-01-30 | gnu: Add go-github-com-djherbis-atime.•••* gnu/packages/golang-xyz.scm (go-github-com-djherbis-atime): New variable.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I320070d68e7f590f830060904f5cbdf59d839d1d
| Thomas Ieong |
| 2024-01-30 | gnu: Add (gnu packages golang-xyz) module.•••* gnu/packages/golang-xyz.scm: New file.
* gnu/local.mk: Add to gnu/packages/golang-xyz.scm scope.
Change-Id: I25e434de1adc29c2f08146f040755287c63632d6
| Sharlatan Hellseher |
| 2024-01-30 | gnu: go-github-com-go-jose-go-jose-v3: Move to (gnu packages golang-web).•••Drop inheritance from go-gopkg-in-square-go-jose-v2 as it's archived by
the owner on Feb 27, 2023.
* gnu/packages/golang.scm (go-github-com-go-jose-go-jose-v3): Move from
here ...
* gnu/packages/golang-web.scm: ... to here.
Change-Id: I67838e18a43d93e5ae3b62e9645b7d22cf474103
| Sharlatan Hellseher |
| 2024-01-30 | gnu: axoloti-patcher: Add missing headers.•••* gnu/packages/axoloti.scm (axoloti-patcher)[arguments]: Include generic
headers in search paths.
Change-Id: I2e1819966eb657ba4a7e0c823e6686de8599dd9a
| Ricardo Wurmus |
| 2024-01-30 | gnu: axoloti-patcher: Use G-expression.•••* gnu/packages/axoloti.scm (axoloti-patcher)[arguments]: Use G-expression;
delete 'make-git-checkout-writable phase.
Change-Id: I4f9b98351f1752391211f1aed84d484184d32771
| Ricardo Wurmus |
| 2024-01-30 | gnu: yggdrasil: Update to 0.5.5.•••* gnu/packages/networking.scm (yggdrasil): Update to 0.5.5.
Change-Id: Iba086d544e8225ec1b08de80f0fc3f01aa1f17b3
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Artyom V. Poptsov |
| 2024-01-30 | gnu: guile-hoot: Update to 0.3.0.•••* gnu/packages/guile-xyz.scm (guile-hoot): Update to 0.3.0.
Change-Id: I355d4b11bdd45bf87e3d7227f259907b1e7d57bd
| David Thompson |
| 2024-01-30 | gnu: r-scran: Update to 1.30.2.•••* gnu/packages/bioconductor.scm (r-scran): Update to 1.30.2.
Change-Id: I49388f6307f88cb671b0a721cc4c82a4804312c6
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-bioccheck: Update to 1.38.2.•••* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.38.2.
[propagated-inputs]: Remove r-httr; add r-httr2 and r-rvest.
Change-Id: I5bcf99f2e3e93141fe502f061c2f347d4f0783bc
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-flowcore: Update to 2.14.1.•••* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.14.1.
Change-Id: I7a8002206aaab85a722463a81939d7cea7d61644
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-rsubread: Update to 2.16.1.•••* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.16.1.
Change-Id: Id01d956d2f76347270d05961dba13f65b268862a
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-edger: Update to 4.0.12.•••* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.12.
Change-Id: If99f10f80fb7c085863d2da79cfce2b94af71543
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-biostrings: Update to 2.70.2.•••* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.70.2.
Change-Id: Id43796f35c5afe6fbe3a37d72e111d28937254a2
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-biomart: Update to 2.58.1.•••* gnu/packages/bioconductor.scm (r-biomart): Update to 2.58.1.
Change-Id: I6304e3be6919367f5d9d99ddb7aae75ab39b9985
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-robustbase: Update to 0.99-2.•••* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-2.
Change-Id: Ic6a248fd55b6b4467742040a884ed25e9d090f47
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-viridis: Update to 0.6.5.•••* gnu/packages/statistics.scm (r-viridis): Update to 0.6.5.
Change-Id: Iaa83edbc2a304e0327f8815967f2e28b686691a0
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-commonmark: Update to 1.9.1.•••* gnu/packages/statistics.scm (r-commonmark): Update to 1.9.1.
Change-Id: Ifccd39448f0d6181bfcede089aa922cd60c5293c
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-data-table: Update to 1.15.0.•••* gnu/packages/statistics.scm (r-data-table): Update to 1.15.0.
Change-Id: I2187d368fb461d72b07e3445bad0240ecc5cd6f1
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-tfruns: Update to 1.5.2.•••* gnu/packages/cran.scm (r-tfruns): Update to 1.5.2.
Change-Id: Iefffe073fb7d2d54e190b3d0433dcb760dad9a10
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-spatstat-geom: Update to 3.2-8.•••* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.2-8.
Change-Id: Iab7190ff6dbe409cc1b400f6a69001a8c13ac1bc
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-iheatmapr: Update to 0.7.1.•••* gnu/packages/cran.scm (r-iheatmapr): Update to 0.7.1.
Change-Id: I83046a2d71d29a18dc15a7a568d0212947b936dd
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-emoa: Update to 0.5-2.•••* gnu/packages/cran.scm (r-emoa): Update to 0.5-2.
Change-Id: Ia1138543ad4a2acf104c4fc19e2d75cfa07eed81
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-tidygraph: Update to 1.3.1.•••* gnu/packages/cran.scm (r-tidygraph): Update to 1.3.1.
Change-Id: I597eaa3eb3afba90462b5ca0a7fed262ecf1aa60
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-xgboost: Update to 1.7.7.1.•••* gnu/packages/cran.scm (r-xgboost): Update to 1.7.7.1.
Change-Id: I949455d58c1fdbb878a77d82e8501c5a615ed441
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-yulab-utils: Update to 0.1.4.•••* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.4.
Change-Id: Ic7e6288859a857ecbd23566b9e5bd1796206764c
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-bqtl: Update to 1.0-36.•••* gnu/packages/cran.scm (r-bqtl): Update to 1.0-36.
Change-Id: I598ad41402e05e8ed628aaf57eac4a1e47689228
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-listenv: Update to 0.9.1.•••* gnu/packages/cran.scm (r-listenv): Update to 0.9.1.
Change-Id: I998a9d35b176ed8dd038fd6392f46b4052e56dd7
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-phylobase: Update to 0.8.12.•••* gnu/packages/cran.scm (r-phylobase): Update to 0.8.12.
Change-Id: I4d022d85cdb6f79fae167bfd7c52a0c2620b0092
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-densityclust: Update to 0.3.3.•••* gnu/packages/cran.scm (r-densityclust): Update to 0.3.3.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
Change-Id: Ia6b5737e2225e67fa064f031d985c076694ec9ce
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-interp: Update to 1.1-6.•••* gnu/packages/cran.scm (r-interp): Update to 1.1-6.
Change-Id: I846729e1637fc0f8762cf8a235cc78df2c1eb810
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-zip: Update to 2.3.1.•••* gnu/packages/cran.scm (r-zip): Update to 2.3.1.
Change-Id: I20ff34e492271063d6baf37f59f6da181c1d7805
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-nestedcv: Update to 0.7.4.•••* gnu/packages/cran.scm (r-nestedcv): Update to 0.7.4.
[propagated-inputs]: Add r-rhpcblasctl.
Change-Id: Ica97cf7c960125543210c48851861d7826a8f8aa
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-laeken: Update to 0.5.3.•••* gnu/packages/cran.scm (r-laeken): Update to 0.5.3.
Change-Id: I9ab9a89d88511b80efb912119ec81a24fafceb84
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-sp: Update to 2.1-3.•••* gnu/packages/cran.scm (r-sp): Update to 2.1-3.
Change-Id: I111d108e6f144ecfdecf5e5ff94b6b11110a9395
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-powerlaw: Update to 0.80.0.•••* gnu/packages/cran.scm (r-powerlaw): Update to 0.80.0.
Change-Id: I1b3c185ac4a8748698fe9218c262620b42f5f06d
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-httpuv: Update to 1.6.14.•••* gnu/packages/cran.scm (r-httpuv): Update to 1.6.14.
Change-Id: I1f650010cce97020f7b563adfcd74d7e4dec4981
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-ga: Update to 3.2.4.•••* gnu/packages/cran.scm (r-ga): Update to 3.2.4.
Change-Id: I698d5c3eda6598c435fcf37b5e7eaaf5c4e15e63
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-ggm: Update to 2.5.1.•••* gnu/packages/bioconductor.scm (r-ggm): Update to 2.5.1.
[propagated-inputs]: Add r-biocmanager.
Change-Id: I8db7e517b96c3c42cb05246378b4190c9c954a47
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-rjava: Update to 1.0-11.•••* gnu/packages/cran.scm (r-rjava): Update to 1.0-11.
[source]: Remove snippet.
[arguments]: Remove 'replace-bundled-minified-JavaScript phase.
[native-inputs]: Remove esbuild.
Change-Id: I008810b6919412023fc419d9cbadfea0fe2892bb
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-catdata: Update to 1.2.4.•••* gnu/packages/cran.scm (r-catdata): Update to 1.2.4.
[native-inputs]: Add r-knitr.
Change-Id: I7e2873a612f114d7124d5787ff70a8bf0ffefe93
| Ricardo Wurmus |
| 2024-01-30 | gnu: r-r-devices: Update to 2.17.2.•••* gnu/packages/cran.scm (r-r-devices): Update to 2.17.2.
[arguments]: Add 'set-HOME phase.
[native-inputs]: Add r-r-rsp.
Change-Id: Iaaead01e690e95971148ae063aa7af589969d39c
| Ricardo Wurmus |
