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2023-02-10gnu: Add python-doubletdetection....* gnu/packages/bioinformatics.scm (python-doubletdetection): New variable. Co-authored-by: Navid Afkhami <navid.afkhami@mdc-berlin.de> Ricardo Wurmus
2023-02-10gnu: Add python-vtraag-louvain....* gnu/packages/graph.scm (python-vtraag-louvain): New variable. Ricardo Wurmus
2023-02-10gnu: Add python-phenograph....* gnu/packages/bioinformatics.scm (python-phenograph): New variable. Ricardo Wurmus
2023-02-10gnu: Add louvain....* gnu/packages/bioinformatics.scm (louvain): New variable. Ricardo Wurmus
2023-02-10gnu: python-hmmlearn: Update to 0.2.8....* gnu/packages/machine-learning.scm (python-hmmlearn): Update to 0.2.8. [arguments]: Use gexp; simplify 'check phase. [propagated-inputs]: Remove python-cython. Ricardo Wurmus
2023-02-10gnu: Add xnedit....* gnu/packages/text-editors.scm (xnedit): New variable. Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Andy Tai
2023-02-10gnu: Add motif....* gnu/packages/lesstif.scm (motif): New variable. Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Andy Tai
2023-02-10gnu: icewm: Enable icewm-menu-fdo....* gnu/packages/wm.scm (icewm)[inputs]: Add glib. 宋文武
2023-02-10gnu: Add icewm....* gnu/packages/wm.scm (icewm): New variable. Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Andy Tai
2023-02-09gnu: Add perl-alien-wxwidgets....* gnu/packages/wxwidgets.scm (perl-alien-wxwidgets): New variable. Co-authored-by: Malte Frank Gerdes <malte.f.gerdes@gmail.com> Andreas Enge
2023-02-09gnu: Add perl-growl-gntp....* gnu/packages/perl.scm (perl-growl-gntp): New variable. Andreas Enge
2023-02-09gnu: Add perl-net-bonjour....* gnu/packages/networking.scm (perl-net-bonjour): New variable. Andreas Enge
2023-02-09gnu: go-github-com-spf13-pflag: Fix building with newer go....* gnu/packages/golang.scm (go-github-com-spf13-pflag)[source]: Add snippet to fix test suite with newer versions of go. Efraim Flashner
2023-02-09gnu: ncdu: Update to 2.2.2....* gnu/packages/ncdu.scm (ncdu): Update to 2.2.2. [native-inputs]: Switch from zig-0.9 to zig-0.10. Efraim Flashner
2023-02-09gnu: zig: Update to 0.10.1....* gnu/packages/zig.scm (zig-0.10): New variable. (zig-0.9): Rename from zig. Inherit from zig-0.10. (zig): Define as zig-0.10. * gnu/packages/ncdu.scm (ncdu)[native-inputs]: Use zig-0.9. * gnu/packages/zig-xyz.scm (zig-zls)[inputs]: Use zig-0.9. Efraim Flashner
2023-02-09gnu: Add gccgo-12....* gnu/packages/gcc.scm (gccgo-12): New variable. (make-gccgo)[arguments]: Adapt custom 'remove-tool-reference-from-libgo to changes in the source. Efraim Flashner
2023-02-09gnu: cl-nfiles: Update to 1.1.0....* gnu/packages/lisp-xyz.scm (sbcl-nfiles): Update to 1.1.0. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> André A. Gomes
2023-02-09gnu: sdrangel: Update to 7.8.6....* gnu/packages/radio.scm (sdrangel): Update to 7.8.6. [inputs]: Add hidapi. Guillaume Le Vaillant
2023-02-09gnu: urh: Update to 2.9.4....* gnu/packages/radio.scm (urh): Update to 2.9.4. Guillaume Le Vaillant
2023-02-09gnu: qdmr: Update to 0.11.2....* gnu/packages/radio.scm (qdmr): Update to 0.11.2. Guillaume Le Vaillant
2023-02-09gnu: julia: Use SSL_CERT_FILE for SSL certificates....Fixes <https://issues.guix.gnu.org/61121>. * gnu/packages/julia.scm (julia)[arguments]: Add a phase to have Julia use the SSL_CERT_FILE search path. [native-search-paths]: Add SSL_CERT_FILE. Efraim Flashner
2023-02-09services: greetd: Fix configuration serialization....* gnu/services/base.scm (make-greetd-terminal-configuration-file): Add missing 'general' section to configuration file. Jelle Licht
2023-02-09gnu: basu: Propagate libcap....* gnu/packages/freedesktop.scm (basu): Propagate libcap so that pkg-config can find basu's dependency. Signed-off-by: Jelle Licht <jlicht@fsfe.org> Josselin Poiret via Guix-patches via
2023-02-09gnu: rpm: Enable zstd support....* gnu/packages/package-management.scm (rpm) [inputs]: Add zstd. Maxim Cournoyer
2023-02-09gnu: kio: Fix indentation....* gnu/packages/kde-frameworks.scm (kio): Fix indentation. Maxim Cournoyer
2023-02-09gnu: kio: Disable flaky kiowidgets-kdirlistertest test....* gnu/packages/kde-frameworks.scm (kio) [phases]: Skip the kiowidgets-kdirlistertest test in the check phase. Maxim Cournoyer
2023-02-09gnu: Add tree-sitter-grammar-html....* gnu/packages/crates-io.scm (tree-sitter-grammar): New variable. (tree-sitter-grammar-html): New variable. Andrew Tropin
2023-02-09gnu: Add tree-sitter-cli....* gnu/packages/tree-sitter.scm (tree-sitter-cli): New variable. Signed-off-by: Andrew Tropin <andrew@trop.in> Pierre Langlois
2023-02-09gnu: Add rust-smallbitvec-2....* gnu/packages/crates-io.scm (rust-smallbitvec-2): New variable. Signed-off-by: Andrew Tropin <andrew@trop.in> Pierre Langlois
2023-02-09gnu: Add rust-html-escape....* gnu/packages/crates-io.scm (rust-html-escape): New variable. Signed-off-by: Andrew Tropin <andrew@trop.in> Pierre Langlois
2023-02-09gnu: tree-sitter: Update package style....* gnu/packages/tree-sitter.scm (tree-sitter): Add gexps, remove trailing #t, reformat code. Andrew Tropin
2023-02-09gnu: tree-sitter: Update to 0.20.7....* gnu/packages/tree-sitter.scm (tree-sitter): Update to 0.20.7. Signed-off-by: Andrew Tropin <andrew@trop.in> Pierre Langlois
2023-02-09gnu: tree-sitter: Move to its own module....* gnu/packages/text-editors.scm (tree-sitter): Move to ... * gnu/packages/tree-sitter.scm: ... here, a new module. * gnu/packages/vim.scm: Use (gnu packages tree-sitter). * gnu/packages/emacs.scm: Use (gnu packages tree-sitter). * gnu/local.mk (GNU_SYSTEM_MODULES): Register tree-sitter.scm new module. Signed-off-by: Andrew Tropin <andrew@trop.in> Pierre Langlois
2023-02-09gnu: Add the Go standard library 1.20....* gnu/packages/golang.scm (go-std-1.20): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Hilton Chain
2023-02-09gnu: Add Go 1.20....* gnu/packages/golang.scm (go-1.20): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Hilton Chain
2023-02-09gnu: greetd: Use new-style inputs....* gnu/packages/admin.scm (greetd)[inputs]: Use new-style inputs. Signed-off-by: Jelle Licht <jlicht@fsfe.org> Felix Lechner
2023-02-09gnu: greetd: Update to 0.9.0....* gnu/packages/admin.scm (greetd): Update to 0.9.0. Signed-off-by: Jelle Licht <jlicht@fsfe.org> Felix Lechner
2023-02-09gnu: rust-nix-0.26: New variable....* gnu/packages/crates-io.scm (rust-nix-0.26): New variable. (rust-nix-0.24): Inherit from above. Signed-off-by: Jelle Licht <jlicht@fsfe.org> Felix Lechner
2023-02-09gnu: Add python-scrublet....* gnu/packages/bioinformatics.scm (python-scrublet): New variable. Navid Afkhami
2023-02-09gnu: efl: Choose lua implementation based on system architecture....* gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Use luajit or lua based on the system's luajit support. [arguments]: Adjust configure-flags to use the correct lua. Efraim Flashner
2023-02-08services: lightdm: Sync documentation with source....Table entry @item nodes cannot span multiple lines. * gnu/services/lightdm.scm (lightdm-gtk-greeter-configuration): Fix cursor-theme-size description. * doc/guix.texi (lightdm-service-type): Sync with source. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Bruno Victal
2023-02-08services: configuration: Format a list of packages by their names....* gnu/services/configuration.scm (generate-documentation): Format a list of packages by their names. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Bruno Victal
2023-02-08gnu: qtdeclarative: Disable tst_qquickfolderdialogimpl test....* gnu/packages/qt.scm (qtdeclarative) [phases]: Mark the tst_qquickfolderdialogimpl test as skipped in the check phase. Maxim Cournoyer
2023-02-09services: Add block-facebook-hosts-service-type....Deprecates %facebook-host-aliases in favour of using hosts-service-type service extensions. * gnu/services/networking.scm (block-facebook-hosts-service-type): New variable. (%facebook-host-aliases): Deprecate variable. * doc/guix.texi: Document it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Bruno Victal
2023-02-09system: Deprecate hosts-file....* gnu/system.scm (operating-system-hosts-file): Deprecate procedure. (warn-hosts-file-field-deprecation): New procedure, helper for deprecated variable. (operating-system)[hosts-file]: Use helper to warn deprecated field. (local-host-aliases): Mark as deprecated. (local-host-entries): New procedure. (operating-system-default-essential-services, hurd-default-essential-services): Use hosts-service-type. Use '%operating-system-hosts-file' and 'local-host-entries'. (default-/etc/hosts): Remove procedure. (operating-system-etc-service): Remove hosts file. * doc/guix.texi (operating-system Reference) (Networking Services) (Virtualization Services): Rewrite documentation entries to use hosts-service-type. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Bruno Victal
2023-02-09services: Add hosts-service-type....* gnu/services/base.scm (<host>): New record type. (host): New procedure. (hosts-service-type): New variable. * doc/guix.texi (Service Reference): Document it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Bruno Victal
2023-02-09gnu: Remove valgrind-3.20....* gnu/packages/valgrind.scm (valgrind-3.20): Delete variable. (valgrind/interactive): Update to 3.20.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Simon Tournier
2023-02-09gnu: libchop: Fix build and test....* gnu/packages/backup.scm (libchop)[source]: Adjust snippet to work around build error in Gnulib's <stdio.h>. [arguments]: Remove 'skip-test' phase and add 'adjust-test' phase. Ludovic Courtès
2023-02-08gnu: linux-libre 4.14: Update to 4.14.305....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.305. (linux-libre-4.14-pristine-source): Update hash. Leo Famulari
2023-02-08gnu: linux-libre 4.19: Update to 4.19.272....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.272. (linux-libre-4.19-pristine-source): Update hash. Leo Famulari
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