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2023-04-26gnu: cppcheck: Skip failing test....* gnu/packages/patches/check.scm (cppcheck)[source]: Add patch. * gnu/packages/patches/cppcheck-disable-char-signedness-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2023-04-25gnu: biber: Fix build with new Perl....* gnu/packages/patches/biber-adapt-perl-5.36.patch: Backport patch from upstream's 760e6e4ec08a3097f7e6136331541a7b8c1c9df7. * gnu/packages/tex.scm (biber): Use it. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Andreas Enge <andreas@enge.fr> Josselin Poiret
2023-04-25Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-04-25gnu: scribus: Fix build with latest poppler....* gnu/packages/patches/scribus-1.5.8-poppler-22.03.0.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.04.0.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.09.0.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.2.0-1.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.2.0-2.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/scribus.scm (scribus)[source]: Add patches. [arguments]: Enable WANT_CPP17 option. Ricardo Wurmus
2023-04-24gnu: dezyne: Add patch to avoid "Exec format error"....This fixes In execvp of ./test/all/parse_import_order/run: Exec format error on shell scripts that lack a shebang. * gnu/packages/patches/dezyne-add-missing-shebangs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/dezyne.scm (dezyne): Use it. Janneke Nieuwenhuizen
2023-04-24gnu: python-magic: Update to 0.4.27....* gnu/packages/patches/python-magic-python-bytecode.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/python-xyz.scm (python-magic): Update to 0.4.27. [source]<patches>: Remove field. [#:phases]<check>: Do not invoke ‘tests.py’. Signed-off-by: Andreas Enge <andreas@enge.fr> Liliana Marie Prikler
2023-04-23gnu: OpenColorIO: Fix build with GCC 11....* gnu/packages/patches/opencolorio-fix-build-with-gcc11.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image-processing.scm (opencolorio)[source]: Use it. Leo Famulari
2023-04-23Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-04-23gnu: gcc-arm-none-eabi-4.9: Fix incompatible redeclaration....* gnu/packages/patches/gcc-4.9-inline.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/embedded.scm (gcc-arm-none-eabi-4.9)[source]: Use it. Ricardo Wurmus
2023-04-23gnu: webkitgtk: Update to 2.40.1 [security fixes]....Fixes CVE-2022-0108, CVE-2022-32885, CVE-2023-27932, CVE-2023-27954, and CVE-2023-28205. * gnu/packages/webkit.scm: Update to 2.40.1. [source]: Remove obsolete patch. * gnu/packages/patches/webkitgtk-libelogind.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Leo Famulari <leo@famulari.name> Karl Hallsby
2023-04-22gnu: zig: Fix build....* gnu/packages/patches/zig-do-not-link-against-librt.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/zig.scm (zig-0.10): Use it. Also force LLVM to be dynamically linked, and set up the CC env variable. (zig-0.9): Also use the above patch. Signed-off-by: Andreas Enge <andreas@enge.fr> Josselin Poiret
2023-04-22gnu: prusa-slicer: Update to 2.5.2....* gnu/packages/patches/prusa-slicer-boost-fixes.patch: New file. * gnu/packages/patches/prusa-slicer-fix-tests.patch: New file. * gnu/packages/patches/prusa-slicer-with-cereal-1.3.1.patch: New file. * gnu/local.mk (dist_patch_DATA): Register them. * gnu/packages/engineering.scm (prusa-slicer): Update to 2.5.2. [source]: Use patches. [inputs]: Replace cereal-1.3.0 by cereal. Guillaume Le Vaillant
2023-04-22Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-04-21gnu: Add clog....* gnu/packages/parallel.scm (clog): New variable. * gnu/packages/patches/clog-fix-shared-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Antero Mejr
2023-04-19gnu: Add converseen....* gnu/packages/image.scm (converseen): New variable. * gnu/packages/patches/converseen-hide-non-free-pointers.patch: * gnu/packages/patches/converseen-hide-updates-checks.patch: New files. * gnu/local.mk: Register files above. Nicolas Goaziou
2023-04-19gnu: python-execnet: Update to 1.9.0-1.d6aa1a5....* gnu/packages/patches/python-execnet-read-only-fix.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/python-xyz.scm (python-execnet): Update to 1.9.0-1.d6aa1a5. [source]: Remove patch. Fetch from git. [build-system]: Use pyproject-build-system. [arguments]: Remove check phase override. Add adjust-for-pytest-7.2+, pretend-version and prepare-for-tests phases. [native-inputs]: Add python-hatchling, python-hatchling-vcs, python-py and python-pytest-timeout. Maxim Cournoyer
2023-04-19gnu: python-shiboken-2: Fix compilation with Python 3.10....* gnu/packages/patches/python-shiboken-2-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/qt.scm (python-shiboken-2): Use it. Ludovic Courtès
2023-04-19gnu: emacs-xelb: Fix compilation error with xcb-proto@1.15....* gnu/packages/patches/emacs-xelb-ignore-length-element.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/emacs-xyz.scm (emacs-xelb): Use it. Ludovic Courtès
2023-04-19gnu: lxqt-session: Fix handling of procps@4....* gnu/packages/patches/lxqt-session-procps-4.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/lxqt.cm (lxqt-session): Apply patch. Andreas Enge
2023-04-18gnu: softhsm: Fix test failure with openssl-3....* gnu/packages/patches/softhsm-fix-openssl3-tests.patch: New file. * gnu/packages/security-token.scm (softhsm): Use it. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Andreas Enge <andreas@enge.fr> Timotej Lazar
2023-04-18gnu: gdb: Remove Hurd patch....The patch was useful for GDB 11 on the previous Hurd version that was used; it's unnecessary on GDB 12 and GDB 11 has other build issues on the current GNU/Hurd. This change fixes "guix build gdb-minimal --target=i586-pc-gnu". * gnu/packages/patches/gdb-fix-gnu-nat-build.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/gdb.scm (gdb-11)[arguments]: Remove 'patch-gdb/hurd' phase. [inputs]: Remove "hurd-build.patch" input. [supported-systems]: New field. (gdb-12)[supported-systems]: New field. Ludovic Courtès
2023-04-17gnu: Add converseen....* gnu/packages/image.scm (converseen): New variable. * gnu/packages/patches/converseen-hide-non-free-pointers.patch: * gnu/packages/patches/converseen-hide-updates-checks.patch: New files. * gnu/local.mk: Register files above. Nicolas Goaziou
2023-04-17Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-04-17gnu: r-mixedpower: Update to b2b87068....* gnu/packages/statistics.scm (r-mixedpower): Update to commit b2b87068546327d8f592d141e5482e0478c1b2ee, remove patch. * gnu/packages/patches/r-mixedpower-r2power.patch: Remove file. * gnu/local.mk: Unregister it. Lars-Dominik Braun
2023-04-15gnu: python-pytest: Fix failing test_raising_repr....* gnu/packages/patches/pytest-fix-unstrable-exception-test.patch: Add new patch from upstream. * gnu/packages/check.scm (python-pytest): Use it. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Andreas Enge <andreas@enge.fr> Josselin Poiret
2023-04-14gnu: valgrind/interactive: Rely on non-stripped glibc symbols....* gnu/packages/valgrind.scm (valgrind/interactive) [source]: Remove patches. [arguments]: Delete field. * gnu/packages/patches/valgrind-fix-default-debuginfo-path.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. Maxim Cournoyer
2023-04-14Merge branch 'master' into core-updates....Conflicts: gnu/local.mk gnu/packages/build-tools.scm gnu/packages/certs.scm gnu/packages/check.scm gnu/packages/compression.scm gnu/packages/cups.scm gnu/packages/fontutils.scm gnu/packages/gnuzilla.scm gnu/packages/guile.scm gnu/packages/ibus.scm gnu/packages/image-processing.scm gnu/packages/linux.scm gnu/packages/music.scm gnu/packages/nss.scm gnu/packages/pdf.scm gnu/packages/python-xyz.scm gnu/packages/qt.scm gnu/packages/ruby.scm gnu/packages/shells.scm gnu/packages/tex.scm gnu/packages/video.scm gnu/packages/vulkan.scm gnu/packages/web.scm gnu/packages/webkit.scm gnu/packages/wm.scm Maxim Cournoyer
2023-04-14gnu: python-afdko: Update to 3.9.4....* gnu/packages/fontutils.scm (python-afdko): Update to 3.9.4. [source]: Remove patch. [arguments]: Disable a few extra tests in the check phase override. Delete use-system-libxml2 phase. Update patch-problematic-requirements phase. * gnu/packages/patches/python-afdko-suppress-copyright-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. Maxim Cournoyer
2023-04-14gnu: python-pyopenssl: Update to 23.1.1....* gnu/packages/python-crypto.scm (python-pyopenssl): Update to 23.1.1. [source]: Remove patches. [arguments]: Update faketime date in check phase. Normalize pytest invocation in check phase override. [propagated-inputs]: Remove python-six. Maxim Cournoyer
2023-04-14gnu: openboardview: Update to 9.95.0....* gnu/packages/electronics.scm (openboardview): Update to 9.95.0. [source]: Apply patch. [arguments]: Update fix-utf8-include-directive phase. [inputs]: Add orangeduck-mpc. * gnu/packages/patches/openboardview-use-system-mpc.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Maxim Cournoyer
2023-04-14gnu: Add orangeduck-mpc....* gnu/packages/c.scm (orangeduck-mpc): New variable. * gnu/packages/patches/orangeduck-mpc-fix-pkg-config.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Maxim Cournoyer
2023-04-14gnu: webkitgtk: Update to 2.40.0....The version is re-integrated with the package to allow 'guix refresh -l' to work. * gnu/packages/patches/webkitgtk-libelogind.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/webkit.scm (%webkit-version): Delete variable. (webkitgtk): Update to 2.40.0. Apply new patch. [arguments]: Add a CMAKE_CXX_FLAGS configure flag. Delete help-cmake-find-elogind phase. [native-inputs]: Add unifdef. [inputs]: Remove gtk+-2. Add libavif. (wpewebkit): Update to 2.40.0. (webkitgtk-next) [inputs]: Remove now extraneous gtk+-2 deletion. Maxim Cournoyer
2023-04-14gnu: VLC: Remove obsolete patch....This reverts 372b037540395b688a0406c89709fdc3af880e4a, which became obsolete with af74211d987d2b8510e2f4937e65f6480754886f. * gnu/packages/video.scm (vlc)[source](patches): Remove. * gnu/packages/patches/vlc-dav1d-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2023-04-14gnu: glslang: Install all libraries....* gnu/packages/patches/glslang-install-static-libs.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/vulkan.scm (glslang)[source](patches): New field. Marius Bakke
2023-04-14gnu: openboardview: Update to 9.0.3....* gnu/packages/electronics.scm (openboardview): Update to 9.0.3. [source](patches): Remove obsolete patch. * gnu/packages/patches/openboardview-use-system-utf8.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2023-04-14gnu: libcdio: Fix test failure with glibc 2.36....* gnu/packages/patches/libcdio-glibc-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/cdrom.scm (libcdio)[source](patches): New field. Marius Bakke
2023-04-14gnu: MariaDB: Update to 10.10.2....* gnu/packages/databases.scm (mariadb): Update to 10.9.3. [source](snippet): Remove adjustments for deprecated TokuDB. [arguments]: Remove obsolete #:configure-flags. Build with system libfmt. Adjust tests for 10.10.2, and mariadb_config file name. Remove patch phase. [native-inputs]: Remove obsolete patch. [inputs]: Add FMT. Change from OPENSSL-1.1 to OPENSSL. * gnu/tests/databases.scm (%mysql-os): Adjust config file so MariaDB works on overlayfs. Marius Bakke
2023-04-14gnu: VLC: Fix build with dav1d 1.0....* gnu/packages/video.scm (vlc)[source](patches): New field. * gnu/packages/patches/vlc-dav1d-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2023-04-14gnu: julia: Fix test suite regression....The update of 'mpfr' to 4.2.0 by commit d26814f8b936911d48bb004093713a525f2c6cf8 introduces a Julia test suite regression. The patch backports the Julia upstream fix. * gnu/packages/julia.scm (julia)[source]: Add patch. * gnu/packages/patches/julia-Use-MPFR-4.2.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Andreas Enge <andreas@enge.fr> Simon Tournier
2023-04-14gnu: gcc-11: Fix build on powerpc64le....* gnu/packages/patches/gcc-11-libstdc++-powerpc.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/gcc.scm (make-libstdc++): Apply patch for gcc versions >= 11 and < 12 on ppc64le. Co-authored-by: Christopher Baines <mail@cbaines.net> Signed-off-by: Christopher Baines <mail@cbaines.net> Andreas Enge
2023-04-14Revert "gnu: gcc-11: Fix build on powerpc64le."...This reverts commit 9900f9e9b86550e7d336b04ad46fba088e28cbd6. Andreas Enge
2023-04-13gnu: gcc-11: Fix build on powerpc64le....* gnu/packages/patches/gcc-11-libstdc++-powerpc.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/gcc.scm (make-libstdc++): Apply patch for gcc versions >= 11 and < 12 on ppc64le. Co-authored-by: Christopher Baines <mail@cbaines.net> Andreas Enge
2023-04-12gnu: python-afdko: Update to 3.9.4....* gnu/packages/fontutils.scm (python-afdko): Update to 3.9.4. [source]: Remove patch. [arguments]: Disable a few extra tests in the check phase override. Delete use-system-libxml2 phase. Update patch-problematic-requirements phase. * gnu/packages/patches/python-afdko-suppress-copyright-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. Maxim Cournoyer
2023-04-12gnu: heimdal: Apply patch to fix CVE-2022-45142....Several recent Heimdal releases are affected by the serious vulnerability CVE-2022-45142, which NIST scored as "7.5 HIGH". [1] At the time of writing, the upstream developers had not yet cut any releases post-7.8.0, which is why the patch is being applied here. The patch was extracted from Helmut Grohne's public vulnerability disclosure. [2] [1] https://nvd.nist.gov/vuln/detail/CVE-2022-45142 [2] https://www.openwall.com/lists/oss-security/2023/02/08/1 * gnu/packages/patches/heimdal-CVE-2022-45142.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/kerberos.scm (heimdal)[source]: Apply it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Felix Lechner
2023-04-12home: Add gpg-agent service....* gnu/home/services/gnupg.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * doc/guix.texi (GNU Privacy Guard): New node. (Secure Shell): Link to it. Ludovic Courtès
2023-04-12gnu: a2ps: Update to 4.15.3....* gnu/packages/pretty-print.scm (a2ps): Update to 4.15.3. [inputs]: Add FILE, LIBGC, LIBPAPER. Re-order alphabetically. [native-inputs]: Add PKG-CONFIG. Re-order alphabetically. * gnu/packages/patches/a2ps-CVE-2001-1593.patch, gnu/packages/patches/a2ps-CVE-2014-0466.patch, gnu/packages/patches/a2ps-CVE-2015-8107.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove entries above. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Andy Tai
2023-04-12gnu: Separate potassco packages into their own module....* gnu/packages/potassco.scm: New file. * gnu/packages/maths.scm (libpotassco, clasp, clingo, python-clingo) (python-telingo): Move to potassco module. Adjust imports accordingly. * gnu/packages/emacs-xyz.scm (emacs-pasp-mode): Move to potassco module. * gnu/local.mk (GNU_SYSTEM_MODULES): Add %D%/packages/potassco.scm. Liliana Marie Prikler
2023-04-12gnu: Add mecab....* gnu/packages/language.scm (mecab): New variable. * gnu/packages/patches/mecab-variable-param.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Julien Lepiller
2023-04-11gnu: python-pyopenssl: Update to 23.1.1....* gnu/packages/python-crypto.scm (python-pyopenssl): Update to 23.1.1. [source]: Remove patches. [arguments]: Update faketime date in check phase. Normalize pytest invocation in check phase override. [propagated-inputs]: Remove python-six. Maxim Cournoyer
2023-04-11gnu: heimdal: Apply patch to fix CVE-2022-45142....Several recent Heimdal releases are affected by the serious vulnerability CVE-2022-45142, which NIST scored as "7.5 HIGH". [1] At the time of writing, the upstream developers had not yet cut any releases post-7.8.0, which is why the patch is being applied here. The patch was extracted from Helmut Grohne's public vulnerability disclosure. [2] [1] https://nvd.nist.gov/vuln/detail/CVE-2022-45142 [2] https://www.openwall.com/lists/oss-security/2023/02/08/1 * gnu/packages/patches/heimdal-CVE-2022-45142.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/kerberos.scm (heimdal)[source]: Apply it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Felix Lechner