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2018-01-26gnu: reposurgeon: Update to 3.43.Tobias Geerinckx-Rice
* gnu/packages/version-control.scm (reposurgeon): Update to 3.43. [source]: Add a patch needed to build the package. [arguments]: Add ‘patch-inputs’ phase. [native-inputs]: Replace docbook-xml-4.1.2 with the latest docbook-xml. [inputs]: Add tzdata. * gnu/packages/patches/reposurgeon-add-missing-docbook-files.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2018-01-25gnu: dovecot: Fix CVE-2017-15132.Leo Famulari
* gnu/packages/patches/dovecot-CVE-2017-15132.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (dovecot)[source]: Use it.
2018-01-25gnu: Update SELinux packages.Ricardo Wurmus
* gnu/packages/selinux.scm (libsepol): Update to 2.7, release 20170804. [source]: Fetch from git. (checkpolicy)[arguments]: Set LIBSEPOLA. (libselinux)[arguments]: Likewise; remove build phase "patch-libsepol-path". (python-sepolgen)[arguments]: Adjust directory name in "enter-dir". (python-setools): Update to 4.1.1. [source]: Fetch from git. (policycoreutils)[source]: Remove patch. [arguments]: Remove build phases "fix-glib-cflags", "fix-linkage-with-libsepol", "fix-target-paths", and "wrap-python-tools". [inputs]: Remove python-wrapper, python-sepolgen, python-setools, python-ipy, libcap-ng, pcre, dbus, dbus-glib, and glib. * gnu/packages/patches/policycoreutils-make-sepolicy-use-python3.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-24gnu: icecat: Add more fixes from upstream mozilla-esr52.Mark H Weaver
Includes fixes for CVE-2018-5104, CVE-2018-5097, CVE-2018-5099, and the remaining 7 out of 21 changesets for CVE-2018-5089. * gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr52 repository. Remove the local spectre mitigation patch in favor of the (identical) changeset from upstream. * gnu/packages/patches/icecat-bug-1427870-spectre-mitigation.patch: Delete. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-23gnu: libsndfile: Fix CVE-2017-12562.Leo Famulari
* gnu/packages/patches/libsndfile-CVE-2017-12562.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pulseaudio.scm (libsndfile)[replacement]: New field. (libsndfile/fixed): New variable.
2018-01-23gnu: rtags: Fix the bundling issue.Fis Trivial
* gnu/packages/patches/rtags-separate-rct.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/code.scm (rtags): Dependencies no longer bundled. [source]: Use tarball release. Use the patch to link rct. Substitute corresponding headers. [native-inputs]: Add new dependencies. [inputs]: Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-23gnu: rct: Add missing headers, enable RTTI.Fis Trivial
* gnu/packages/patches/rct-add-missing-headers.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/cpp.scm (rct): Use the patch, enable RTTI. [source]: Use the patch to add missing headers from installation. [arguments]: Enable RTTI in configure-flags. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-19gnu: libexif: Fix CVE-2016-6328.Leo Famulari
* gnu/packages/patches/libexif-CVE-2016-6328.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/photo.scm (libexif)[source]: Use it.
2018-01-19gnu: ninja: Update to 1.8.2.Tobias Geerinckx-Rice
* gnu/packages/ninja.scm (ninja): Update to 1.8.2. [source]: Remove upstreamed patch. [arguments]: Substitute INVOKE for SYSTEM*. Use standard indentation. * gnu/packages/patches/ninja-zero-mtime.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-18gnu: webkitgtk: Update to 2.18.5.Mark H Weaver
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.5. [source]: Remove patch. * gnu/packages/patches/webkitgtk-mitigate-spectre.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-18gnu: slurm: Update to 17.11.2.Tobias Geerinckx-Rice
* gnu/packages/parallel.scm (slurm): Update to 17.11.2. [source]: Replace patch with less fragile SUBSTITUTE* in a snippet. [arguments]: Rename ‘autogen’ phase to ‘autoconf’. Use INVOKE. * gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-18gnu: Add sl.Tobias Geerinckx-Rice
* gnu/packages/toys.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-01-18gnu: lxterminal: Update to 0.3.1.Tobias Geerinckx-Rice
* gnu/packages/lxde.scm (lxterminal): Update to 0.3.1. [source]: Remove patch for fixed CVE. [arguments]: No longer skip test suite which appear to be fixed. * gnu/packages/patches/lxterminal-CVE-2016-10369.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-16gnu: libxml2: Fix CVE-2017-15412.Leo Famulari
* gnu/packages/patches/libxml2-CVE-2017-15412.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xml.scm (libxml2/fixed)[source]: Use it.
2018-01-15gnu: Add emacs-json-reformat.Oleg Pykhalov
* gnu/packages/patches/emacs-json-reformat-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/emacs.scm (emacs-json-reformat): New variable.
2018-01-12gnu: transmission: Fix a DNS rebinding vulnerability that allows RCE.Leo Famulari
* gnu/packages/patches/transmission-fix-dns-rebinding-vuln.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bittorrent.scm (transmission)[source]: Use it.
2018-01-12gnu: dtc: Update to 1.4.6.Tobias Geerinckx-Rice
* gnu/packages/bootloaders.scm (dtc): Update to 1.4.6. [source]: Remove both patches. * gnu/packages/patches/dtc-format-modifier.patch: Delete file. * gnu/packages/patches/dtc-32-bits-check.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Remove both.
2018-01-11gnu: libvorbis: Fix CVE-2017-{14632,14633}.Leo Famulari
* gnu/packages/patches/libvorbis-CVE-2017-14632.patch, gnu/packages/patches/libvorbis-CVE-2017-14633.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xiph.scm (libvorbis)[replacement]: New field. (libvorbis/fixed): New variable.
2018-01-11gnu: guile-bytestructures: Update to 1.0.1.amirouche
* gnu/package/guile.scm (guile-bytestructures): Update to 1.0.1. [source]: Use tarball from github instead of git. [build-system]: Use GNU-BUILD-SYSTEM. [arguments]: Remove. [navitve-inputs]: Add PKG-CONFIG. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-11gnu: newsbeuter: Deprecate in favour of newsboat.Tobias Geerinckx-Rice
* gnu/packages/syndication.scm (newsbeuter): Redefine using ‘deprecated-package’. * gnu/packages/patches/newsbeuter-CVE-2017-12904.patch: Delete file. * gnu/packages/patches/newsbeuter-CVE-2017-14500.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Remove both.
2018-01-08gnu: ledger: Fix test failures.Eric Bavier
* gnu/packages/patches/ledger-revert-boost-python-fix.patch, gnu/packages/patches/ledger-fix-uninitialized.patch: New patches. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/finance.scm (ledger)[source]: Use them.
2018-01-08gnu: services: Add darkstat service.宋文武
* gnu/services/monitoring.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * doc/guix.texi (Monitoring Services): Document it.
2018-01-07gnu: webkitgtk: Disable SharedArrayBuffers to mitigate Spectre.Mark H Weaver
* gnu/packages/patches/webkitgtk-mitigate-spectre.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/webkit.scm (webkitgtk)[source]: Add patch.
2018-01-06gnu: icecat: Add more fixes, including Spectre mitigation.Mark H Weaver
* gnu/packages/gnuzilla.scm (icecat)[source]: Add more fixes from the upstream mozilla-esr52 repository, plus a backported mitigation for Spectre from Firefox 57.0.4. * gnu/packages/patches/icecat-bug-1427870-spectre-mitigation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2018-01-05gnu: Add domainfinder.Konrad Hinsen
* gnu/packages/chemistry.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
2018-01-04gnu: ao-cad: Update and fix for aarch64.Eric Bavier
* gnu/packages/patches/ao-cad-aarch64-support.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/engineering.scm (ao-cad)[source]: Use it. Update snapshot to fb288c9. Use VCS helpers for version and file-name. [arguments]: Add 'remove-native-compilation' phase.
2018-01-03gnu: fossil: Fix CVE-2017-17459.Leo Famulari
* gnu/packages/patches/fossil-CVE-2017-17459.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/version-control.scm (fossil)[source]: Use it.
2018-01-03gnu: httpd: Update to 2.4.29.Leo Famulari
* gnu/packages/web.scm (httpd): Update to 2.4.29. [source]: Remove patch. * gnu/packages/patches/httpd-CVE-2017-9798.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-12-31gnu: Add xxhash.Tobias Geerinckx-Rice
* gnu/packages/digest.scm: New file (xxhash): New public variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
2017-12-31gnu: gimp: Fix CVE-2017-{17784,17785,17786,17787,17789}.Leo Famulari
* gnu/packages/patches/gimp-CVE-2017-17784.patch, gnu/packages/patches/gimp-CVE-2017-17785.patch, gnu/packages/patches/gimp-CVE-2017-17786.patch, gnu/packages/patches/gimp-CVE-2017-17787.patch, gnu/packages/patches/gimp-CVE-2017-17789.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gimp.scm (gimp)[source]: Use them.
2017-12-30gnu: borg: Update to 1.1.4.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borg): Update to 1.1.4. [source]: Remove obsolete patch. Remove bundled lz4 and zstd. [inputs]: Add zstd. [arguments]: Build with input versions of lz4 and zstd. * gnu/packages/patches/borg-fix-archive-corruption-bug.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-12-27gnu: python-pillow: Fix test failures on i686-linux and armhf-linux.Kei Kebreau
* gnu/packages/patches/python-pillow-fix-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pillow)[source]: Use it.
2017-12-26gnu: icecat: Add more fixes from upstream mozilla-esr52.Mark H Weaver
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr52 repository. * gnu/packages/patches/icecat-bug-1414945.patch, gnu/packages/patches/icecat-bug-1424373-pt2.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2017-12-25gnu: Move libupnp to (gnu packages upnp).Leo Famulari
* gnu/packages/libupnp.scm: Delete file. * gnu/local.mk (GNU_SYSTEM_MODULES): Remove it. * gnu/packages/upnp.scm (libupnp): New variable.
2017-12-23gnu: chicken: Update to 4.13.0.Kei Kebreau
* gnu/packages/scheme.scm (chicken): Update to 4.13.0. [source]: Remove obsolete patches. * gnu/packages/patches/chicken-CVE-2017-6949.patch, gnu/packages/patches/chicken-CVE-2017-11343.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2017-12-22gnu: python-pillow: Update to 4.3.0.Kei Kebreau
* gnu/packages/python.scm (python-pillow): Update to 4.3.0. [propagated-inputs]: Add python-olefile. * gnu/packages/patches/python-pillow-freetype-2.7-test-failure.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2017-12-21gnu: libgxps: Fix CVE-2017-11590.Leo Famulari
* gnu/packages/patches/libgxps-CVE-2017-11590.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (libgxps)[source]: Use it.
2017-12-21gnu: libxslt: Fix CVE-2017-5029 and re-apply the fix for CVE-2016-4738.Leo Famulari
This is a followup to commit 2663c38826cd6c2ef0c5119f8072fac8e89b2e9b. * gnu/packages/xml.scm (libxslt)[replacement]: New field. (libxslt/fixed): New variable. * gnu/packages/patches/libxslt-CVE-2017-5029.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-12-21gnu: libarchive: Fix CVE-2017-14502.Leo Famulari
* gnu/packages/patches/libarchive-CVE-2017-14502.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/backup.scm (libarchive-3.3.2)[source]: Use it.
2017-12-21gnu: libexif: Fix CVE-2017-7544.Leo Famulari
* gnu/packages/patches/libexif-CVE-2017-7544.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/photo.scm (feh)[source]: Use it.
2017-12-21gnu: xboing: Fix CVE-2004-0149.Efraim Flashner
* gnu/packages/patches/xboing-CVE-2004-0149: New file. * gnu/packages/games.scm (xboing)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register it.
2017-12-21gnu: mupdf: Update to 1.12.0 [fixes CVE-2017-15369].Leo Famulari
* gnu/packages/pdf.scm (mupdf): Update to 1.12.0. [source]: Remove obsolete patches. [inputs]: Add freeglut. * gnu/packages/patches/mupdf-CVE-2017-14685.patch, gnu/packages/patches/mupdf-CVE-2017-14686.patch, gnu/packages/patches/mupdf-CVE-2017-14687.patch, gnu/packages/patches/mupdf-CVE-2017-15587.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Update and rename to... * gnu/packages/patches/mupdf-build-with-latest-openjpeg.patch: ... new file.
2017-12-20gnu: links: Fix-CVE-2017-11114.Leo Famulari
* gnu/packages/patches/links-CVE-2017-11114.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/web-browsers.scm (links)[source]: Use it.
2017-12-19gnu: qemu: Update to 2.10.2.Marius Bakke
* gnu/packages/patches/qemu-CVE-2017-15118.patch, gnu/packages/patches/qemu-CVE-2017-15119.patch, gnu/packages/patches/qemu-CVE-2017-15268.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/virtualization.scm (qemu): Update to 2.10.2. [source](patches): Remove obsolete.
2017-12-18gnu: rsync: Patch CVE-2017-{16548,17433,17434}.Efraim Flashner
* gnu/packages/rsync.scm (rsync)[source]: Add patches. [properties]: Mark CVE-2017-15994 as not relevant. * gnu/packages/patches/rsync-CVE-2017-16548.patch, gnu/packages/patches/rsync-CVE-2017-17433.patch, gnu/packages/patches/rsync-CVE-2017-17433-fix-tests.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt1.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt2.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
2017-12-16gnu: borg: Fix a data loss bug.Leo Famulari
See <https://github.com/borgbackup/borg/issues/3444> for more information. * gnu/packages/patches/borg-fix-archive-corruption-bug.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/backup.scm (borg)[source]: Use it.
2017-12-16gnu: Add libvdpau-va-gl.Efraim Flashner
* gnu/packages/video.scm (libvdpau-va-gl): New variable. * gnu/packages/patches/libvdpau-va-gl-unbundle.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2017-12-15gnu: eigen: Update to 3.3.4.Eric Bavier
* gnu/packages/patches/eigen-arm-neon-fixes.patch: New patch. * gnu/packages/algebra.scm (eigen): Update to 3.3.4. [source]: Use patch. Disable svd-preallocation test for BDCSVD. [arguments]: Set "EIGEN_SEED" environment variable in check phase. * gnu/local.mk (dist_patch_DATA): Add patch.
2017-12-15bootloader: Factorize write-file-on-device.Mathieu Othacehe
* gnu/bootloader/extlinux.scm (install-extlinux): Factorize bootloader writing in a new procedure write-file-on-device defined in (gnu build bootloader). * gnu/build/bootloader.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add new file. * gnu/system/vm.scm (qemu-img): Adapt to import and use (gnu build bootloader) module during derivation building. * gnu/scripts/system.scm (bootloader-installer-derivation): Ditto.
2017-12-14gnu: python-scikit-learn: Patch test non-determinism.Ben Woodcroft
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch: New file. * gnu/packages/machine-learning.scm (python-scikit-learn)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
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