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2022-01-26gnu: util-linux: Fix CVE-2021-3995 and CVE-2021-3996.Leo Famulari
* gnu/packages/patches/util-linux-CVE-2021-3995.patch, gnu/packages/patches/util-linux-CVE-2021-3996.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/linux.scm (util-linux)[replacement]: New field. (util-linux/fixed): New variable.
2022-01-26gnu: polkit: Fix CVE-2021-4034.Ludovic Courtès
* gnu/packages/patches/polkit-CVE-2021-4034.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/polkit.scm (polkit-mozjs)[replacement]: New field. * gnu/packages/polkit.scm (polkit-mozjs/fixed): New variable.
2022-01-23gnu: gnome-builder: Fix build.Liliana Marie Prikler
* gnu/packages/patches/gnome-builder-update-libportal.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it here. * gnu/packages/gnome.scm (gnome-builder)[patches]: Use it here. [inputs, native-inputs]: Add python.
2022-01-22gnu: behave: Update to 1.2.7.dev2.Marius Bakke
* gnu/packages/check.scm (behave): Update to 1.2.7.dev2. [source]: Switch to GIT-FETCH. Remove patches. [arguments]: Remove #:test-target. Add #:phases. [propagated-inputs]: Add PYTHON-COLORAMA and PYTHON-CUCUMBER-TAG-EXPRESSIONS. * gnu/packages/patches/behave-skip-a-couple-of-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-01-22gnu: jacal: Update to 1c7.Morgan Smith
* gnu/packages/patches/jacal-fix-texinfo.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Delete this. * gnu/packages/maths.scm (jacal)[source]: Delete this patch. [version]: Update to 1c7. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2022-01-22gnu: sssd: Fix build with samba-4.15.3.Remco van 't Veer
* gnu/packages/patches/sssd-fix-samba-4.15.3.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/sssd.scm [source]: Add this. [native-inputs]: Add AUTOCONF. [arguments]: Add add-config-in phase. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2022-01-22gnu: gnome-todo: Update to 41.0 and enable tests.Maxim Cournoyer
* gnu/packages/patches/gnome-todo-libportal.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnome.scm (gnome-todo): Update to 41.0. [source]: Apply patch. [arguments]: Use G-exp. [tests?]: Delete field, enabling tests. [phases]: Move check phase after install phase. {pre-check}: Add phase. [native-inputs]: Re-style. [inputs]: Likewise. [description]: Re-indent.
2022-01-21gnu: nix: Update to 2.4.Zhu Zihao
* gnu/packages/package-management.scm (nix): Update to 2.4. [source]: Switch to Github repository since upstream no longer provides tarball. [native-inputs]: Add autoconf, autoconf-archive, automake, bison, flex, gcc, googletest, jq, libtool. [inputs]: Add libarchive, libcpuid, lowdown, zlib. * gnu/packages/patches/nix-dont-build-html-doc.diff: New file. * gnu/local.mk(dist_patch_DATA): Add corresponding entry. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2022-01-20gnu: dune-istl: Update to 2.7.1.Felix Gruber
* gnu/packages/maths.scm (dune-istl): Update to 2.7.1. [arguments]: Parallelize build-tests phase. [source](patches) Remove patch that is no longer needed. * gnu/packages/patches/dune-istl-2.7-fix-non-mpi-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove above patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-20gnu: pulseview: Fix buildMathieu Othacehe
* gnu/packages/patches/pulseview-glib-2.68.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/electronics.scm (pulseview): Register it. Also disable the tests which are failing and remove a trailing #t.
2022-01-16gnu: wpa-wupplicant: Update to 2.10 [security fixes].Leo Famulari
See the upstream advisory for more information on the security fixes contained in these updates: https://w1.fi/security/2022-1/sae-eap-pwd-side-channel-attack-update-2.txt * gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.10. [source]: Remove obsolete patches. * gnu/packages/patches/wpa-supplicant-CVE-2021-27803.patch, gnu/packages/patches/wpa-supplicant-CVE-2021-30004.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-01-19gnu: audacity: Update to 3.1.3Liliana Marie Prikler
* gnu/packages/patches/audacity-add-include.patch: Delete file. * gnu/packages/patches/audacity-build-with-system-portaudio.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/audio (audacity): Update to 3.1.3 [inputs]: Use wxwidgets-3.1. Add linux-libre-headers, libjpeg-turbo, sqlite, portaudio. [#:configure-flags]: Update to disable conan during build, prefer system libraries, and disable features that phone home. [#:phases]: Add fix-cmake-rpath to ensure correct DT_RUNPATHs. Adjust comment-out-revision-indent and use-upstream-headers. [native-search-paths]: Add AUDACITY_MODULES_PATH and AUDACITY_PATH.
2022-01-18gnu: python-pydot: Update to 1.4.2.Marius Bakke
* gnu/packages/graphviz.scm (python-pydot): Update to 1.4.2. [source](patches): Remove. * gnu/packages/patches/python-pydot-regression-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-01-18gnu: gnome-control-center: Update to 41.2.Maxim Cournoyer
* gnu/packages/patches/gnome-control-center-libexecdir.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnome.scm (gnome-control-center): Update to 41.2. [source]: Apply patch. [phases]{no-polkit-magic}: New phase. [native-inputs]: Use new style. Add python. [propagated-inputs]: Use new style. Replace gdk-pixbuf by librsvg.
2022-01-17gnu: Add xmonad-next and ghc-xmonad-contrib-next.John Kehayias
Fixes: <https://issues.guix.gnu.org/issue/52784>. * gnu/packages/wm.scm (xmonad-next): New variable. Compared to xmonad: Update to 0.17.0. [inputs]: Add GHC-DATA-DEFAULT-CLASS, remove GHC-EXTENSIBLE-EXCEPTIONS, GHC-DATA-DEFAULT, GHC-SEMIGROUPS, and GHC-UTF8-STRING. [native-inputs]: Add GHC-QUICKCHECK and GHC-QUICKCHECK-CLASSES. (ghc-xmonad-contrib-next): New variable. Compared to ghc-xmonad-contrib: Update to 0.17.0. [propagated-inputs]: Remove GHC-OLD-TIME, GHC-EXTENSIBLE-EXCEPTIONS, GHC-SEMIGROUPS. [native-inputs]: Add GHC-QUICKCHECK and GHC-HSPEC. (xmonad): Inherit from xmonad-next. (ghc-xmonad-contrib): Inherit from ghc-xmonad-contrib-next. * gnu/packages/patches/xmonad-next-dynamic-linking.patch: New patch. Update of xmonad-dynamic-linking.patch to apply to xmonad-next. * gnu/local.mk: Add it. Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
2022-01-17gnu: password-store: Ensure compatibility with tree@2.0.Marius Bakke
Fixes <https://bugs.gnu.org/53238>, et.al. * gnu/packages/patches/password-store-tree-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/password-utils.scm (password-store)[source](patches): New field.
2022-01-17Merge branch 'version-1.4.0'Maxim Cournoyer
With resolved conflicts in: gnu/packages/gnome.scm gnu/packages/openstack.scm gnu/packages/python-xyz.scm
2022-01-10gnu: binutils: Fix CVE-2021-45078.Leo Famulari
This is for the release branch. Should we also use a graft for the master branch? It would be even better if we could add a binutils-next package that users could install, in my opinion. * gnu/packages/patches/binutils-CVE-2021-45078.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (binutils)[source]: Use it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-01-10gnu: gtk: Update to 4.4.1.Maxim Cournoyer
* gnu/packages/patches/gtk-introspection-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gtk.scm (gtk): Update to 4.4.1. [origin]: Apply new patch. [phases]{pre-check}: Set TZDIR. [native-inputs]: Add graphene, python-pygobject and tzdata.
2022-01-10gnu: shadow: Update to 4.9.Maxim Cournoyer
* gnu/packages/admin.scm (shadow): Update to 4.9. [source]: Remove hurd patch, merged upstream. [phases]{fix-linking-to-pam}: New phase. * gnu/packages/patches/shadow-hurd-pctrl.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it.
2022-01-09gnu: Remove leftover patches for Blender 2.79.Leo Famulari
This is a followup to commit 23da063ea3bb6a579f0fb87d2e5e00fed9962775. * gnu/packages/patches/blender-2.79-gcc8.patch, gnu/packages/patches/blender-2.79-gcc9.patch, gnu/packages/patches/blender-2.79-newer-ffmpeg.patch, gnu/packages/patches/blender-2.79-oiio2.patch, gnu/packages/patches/blender-2.79-python-3.7-fix.patch, gnu/packages/patches/blender-2.79-python-3.8-fix.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2022-01-09Revert "gnu: tree: Fix problem with no output when fd3 is present."Tobias Geerinckx-Rice
This reverts commit bd4f314bbacaaa56751be3a4769f2082be747d24.
2022-01-15gnu: passwordsafe: Update to 5.1.raingloom
* gnu/packages/gnome.scm (passwordsafe): Update to 5.1. * gnu/packages/patches/passwordsafe-meson-remove-extra-argument.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-15gnu: libsigrokdecode: Fix build with python 3.9.Danny Milosavljevic
* gnu/packages/patches/libsigrokdecode-python3.9-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/electronics.scm (libsigrokdecode)[native-inputs]: Add automake, autoconf. [source](patches): New field.
2022-01-15gnu: Add python-piexif.Hartmut Goebel
* gnu/packages/python-xyz.scm (python-piexif): New variable. * gnu/packages/patches/python-piexif-fix-tests-with-pillow-7.2.patch: New file. * gnu/packages/python-xyz.scm (dist_patch_DATA): Add it.
2022-01-15gnu: tree: Fix problem with no output when fd3 is present.Marius Bakke
* gnu/packages/patches/tree-disable-stddata.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/admin.scm (tree)[source](patches): New field.
2022-01-14gnu: jami: Fix crash on exit.Maxim Cournoyer
* gnu/packages/patches/jami-fix-crash-on-quit.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/jami.scm (jami): Apply it.
2022-01-14gnu: Add myrddin.Guix Together
* gnu/local.mk (GNU_SYSTEM_MODULES): Add myrddin.scm. * gnu/packages/myrddin.scm: New file. Co-authored-by: jgart <jgart@dismail.de> Co-authored-by: Jorge Acereda <jacereda@gmail.com> Co-authored-by: Raghav Gururajan <rg@raghavgururajan.name> Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-14gnu: Calibre: Fix a build failure with recent zeroconf.Leo Famulari
Fixes <https://issues.guix.gnu.org/53247>. * gnu/packages/patches/calibre-fix-zeroconf.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ebook.scm (calibre)[source]: Use it.
2022-01-14gnu: quassel: Update to 0.14.0.Efraim Flashner
* gnu/packages/irc.scm (quassel): Update to 0.14.0. [source]: Remove patch. [inputs]: Add boost, perl, sonnet. * gnu/packages/patches/quassel-qt-514-compat.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2022-01-13gnu: lua: Add version 5.4.3.Alex Devaure
* gnu/packages/lua.scm (lua-5.4): New variable. * gnu/packages/patches/lua-5.4-liblua-so.patch, gnu/packages/patches/lua-5.4-pkgconfig.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-01-13gnu: bubblewrap: Update to 0.5.0.kiasoc5
* gnu/packages/patches/bubblewrap-fix-locale-in-tests.patch: Add it. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/virtualization.scm (bubblewrap): Update to 0.5.0. [source]: Add patch. [arguments]: Adjust test substitutions. [inputs]: Remove labels. [native-inputs]: Remove labels. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-13gnu: jami: Update to 20211223.2.37be4c3.Maxim Cournoyer
* gnu/packages/patches/pjproject-correct-the-cflags-field.patch: Delete file. * gnu/packages/patches/pjproject-fix-pkg-config-ldflags.patch: Likewise. * gnu/local.mk (dist_patch_DATA): De-register them. * gnu/packages/jami.scm (%jami-version): Update version string. (%jami-sources): Adjust snippet. (jami-apply-custom-patches): Use G-Exp. (pjproject-jami): Use Savoir-faire Linux's fork and update to 2.11-0.e1f389d. [phases]: Adjust and update accordingly. (%ffmpeg-default-configure-flags): Capitalize and reword comments. (ffmpeg-jami)[native-inputs]: Delete field. [tests?]: Add comment and move into the SUBSTITUTE-KEYWORD-ARGUMENTS use. [phases]: Use G-Exp and update the list of patches. (libring): Deprecate and rename to... (libjami): ... this. Move the arguments field before the inputs. [tests?]: Add explanatory comment. [configure-flags]: Add '--disable-agent', with explanatory comment. [phases]{change-directory}: Rename to... {change-directory/maybe}: ... this, to attempt but not enforce a directory change so as to also support using a Git checkout as source. {add-lib-dir}: Remove phase. [inputs]: Use new style. [native-inputs]: Add cppunit. (libringclient): Deprecate and rename to... {jami-libclient}: ... this. [configure-flags]: Enable LIBWRAP. [phases]{change-directory/maybe}: Renamed from change-directory, for reasons described above. [inputs]: Adjust accordingly. (jami-gnome): Move the input fields below the arguments field. [phases]{change-directory/maybe}: Renamed from change-directory, for reasons described above. [inputs]: Rename libringclient to jami-libclient and use new style. [native-inputs]: Use new style. [propagated-inputs]: Delete field. (jami-qt): Deprecate and rename to... (jami): ... this. [phases]{change-directory/maybe}: Renamed from change-directory, for reasons described above. [native-inputs]: Add python. [inputs]: Adjust accordingly. [propagated-inputs]: Delete field.
2022-01-13gnu: pjproject: Apply patch to install the libpjsua2 shared library.Maxim Cournoyer
* gnu/packages/patches/pjproject-install-libpjsua2.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/telephony.scm (pjproject): Apply it.
2022-01-11gnu: nautilus: Fix build with libportal-0.5.Pierre Langlois
* gnu/packages/patches/nautilus-add-libportal-gtk3.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (nautilus)[source]: Use it.
2022-01-11gnu: QEMU: Update to 6.2.0.Marius Bakke
* gnu/packages/patches/qemu-CVE-2021-20203.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/virtualization.scm (qemu): Update to 6.2.0. [source](patches): Remove obsolete patch.
2022-01-11gnu: epiphany: Fix build with libportal-0.5.Guillaume Le Vaillant
* gnu/packages/patches/epiphany-update-libportal-usage.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (epiphany)[source]: Use it.
2022-01-11gnu: eog: Fix build with libportal-0.5.Daniel Meißner
After the update to libportal-0.5 in 294476022f19139e290acb448d4575de0f851673 eog fails with: ../eog-40.3/src/eog-util.c:48:10: fatal error: libportal/portal-gtk3.h: No such file or directory This was already fixed upstream and this commits extracts the patch. * gnu/packages/patches/eog-update-libportal-usage.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnome.scm(eog)[origin]: Add new patch. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-01-11gnu: Add htslib-for-stringtie.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (htslib-for-stringtie): New variable. * gnu/packages/patches/htslib-for-stringtie.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2022-01-11gnu: Add gpaste.Attila Lendvai
* gnu/packages/gnome-xyz.scm (gpaste): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-11gnu: dealii: Update to 9.3.2.Felix Gruber
* gnu/packages/maths.scm (dealii): Update to 9.3.2. [source]: Add dealii-fix-compiliation-with-boost-1.78.patch and dealii-fix-sundials.patch. [inputs]: Use simplified format. [native-inputs]: Use simplified format. * gnu/packages/patches/dealii-fix-compiliation-with-boost-1.78.patch: New file. * gnu/packages/patches/dealii-fix-sundials.patch: New file. * gnu/local.mk: Add new patch files. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-09gnu: chez-scheme: Update to 9.5.6.Tobias Geerinckx-Rice
* gnu/packages/chez.scm (chez-scheme): Update to 9.5.6. [source]: Remove patch. [arguments]: Don't explicitly return #t from phases. * gnu/packages/patches/chez-scheme-build-util-paths-backport.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2022-01-07gnu: ungoogled-chromium: Update to 97.0.4692.71-1.Marius Bakke
* gnu/packages/patches/ungoogled-chromium-system-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/chromium.scm (%guix-patches): Add it. (%chromium-version): Set to 97.0.4692.71-1. (%ungoogled-origin, ungoogled-chromium): Update hashes.
2022-01-07gnu: xpra: Install Cython-built libraries.Lars-Dominik Braun
xpra would fail to start, because shared objects were not installed. It’s not clear why it stopped working, but it seems it was not the upgrade I reverted in commit ab6d56d01d62757caa66fe0a23e8864c9122f0e6 to fix #52869. Sorry for the confusion :( * gnu/packages/patches/xpra-4.2-install_libs.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/xorg.scm (xpra)[source]: Add new patch. [arguments]: Ensure 'build phase runs and passes #:configure-flags to setup.py.
2022-01-06gnu: tremc: Fix execution with recent Python.Tobias Geerinckx-Rice
* gnu/packages/bittorrent.scm (tremc)[source]: Add patch. * gnu/packages/patches/tremc-fix-decodestring.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Reported by gnoo in #guix
2022-01-06gnu: Add openrgb.John Kehayias
* gnu/packages/hardware.scm (openrgb): New variable. * gnu/packages/patches/openrgb-unbundle-hueplusplus.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
2022-01-06gnu: Add hueplusplus.John Kehayias
* gnu/packages/hardware.scm (hueplusplus): New variable. * gnu/packages/patches/hueplusplus-mbedtls.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2022-01-05gnu: tootle: Fix build.Taiju HIGASHI
* gnu/packages/patches/tootle-glib-object-naming.patch, gnu/packages/patches/tootle-reason-phrase.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/mastodon.scm (tootle)[source]: Use them. [inputs]: Use LIBSOUP-MINIMAL-2 instead of LIBSOUP. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05gnu: linuxdcpp: Reanimate.Tobias Geerinckx-Rice
* gnu/packages/direct-connect.scm (linuxdcpp)[source]: Add patch and snippet to fix build. * gnu/packages/patches/linuxdcpp-openssl-1.1.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2022-01-04gnu: Add python-pdoc3.Mathieu Othacehe
* gnu/packages/patches/python-pdoc3-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/local.mk (python-pdoc3): New variable.
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