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2021-05-19gnu: guile-ssh: Fix test failure due to Guile 3.0.7's 'read-error'.Ludovic Courtès
Reported by Marius Bakke. * gnu/packages/patches/guile-ssh-read-error.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ssh.scm (guile-ssh)[source]: Use it. (guile2.0-ssh)[source]: New field. (guile2.2-ssh)[source]: New field.
2021-05-15Merge branch 'master' into core-updatesLudovic Courtès
2021-05-13gnu: freeglut: Fix build with GCC 10.Marius Bakke
* gnu/packages/patches/freeglut-gcc-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/gl.scm (freeglut)[source](patches): New field.
2021-05-13gnu: hplip: Update to 3.21.4.Tobias Geerinckx-Rice
* gnu/packages/cups.scm (hplip): Update to 3.21.4. [source]: Remove fussy patch. Replace it with an short snippet substitution and... [arguments]: ...the new "--disable-imageProcessor-build" configure flag. * gnu/packages/patches/hplip-remove-imageprocessor.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-05-13gnu: snappy: Update to 1.1.9.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (snappy): Update to 1.1.9. [source]: Add another patch. [arguments]: Add new #:configure-flags and an 'unpack-third_party-subprojects phase. [native-inputs]: Add the sources for benchmark and googletests. * gnu/packages/patches/snappy-add-inline-for-GCC.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-05-11gnu: Add giara.Raghav Gururajan
* gnu/packages/syndication.scm (giara): New variable. * gnu/packages/patches/giara-fix-login.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-05-09gnu: ghostscript: Update to 9.54.0.Marius Bakke
* gnu/packages/patches/ghostscript-freetype-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ghostscript.scm (ghostscript): Update to 9.54.0. [source](patches): Remove obsolete patch.
2021-05-09gnu: CMake: Update to 3.20.2.Marius Bakke
* gnu/packages/cmake.scm (%common-disabled-tests): Don't disable BootstrapTest. (cmake-bootstrap): Update to 3.20.2. [source](modules, snippet): Move from here ... (cmake-minimal)[source]: ... to here. * gnu/packages/patches/mariadb-cmake-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/databases.scm (mariadb)[source](patches): Add it.
2021-05-09gnu: mit-krb5: Update to 1.19.1.Marius Bakke
* gnu/packages/patches/mit-krb5-hurd.patch: Adjust for 1.19.1. * gnu/packages/patches/mit-krb5-qualify-short-hostnames.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/kerberos.scm (mit-krb5): Update to 1.19.1. [source](patches): Remove obsolete patch. [arguments]: Remove trailing #t's and one obsolete subtitution.
2021-05-09gnu: Remove obsolete patches.Marius Bakke
These patches were pulled in via merges from 'master', but have no use on 'core-updates'. * gnu/packages/patches/python-3.8-CVE-2021-3177.patch, gnu/packages/patches/python-3.9-fix-tests.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2021-05-09Merge branch 'master' into core-updatesMarius Bakke
Conflicts: gnu/local.mk gnu/packages/bioinformatics.scm gnu/packages/django.scm gnu/packages/gtk.scm gnu/packages/llvm.scm gnu/packages/python-web.scm gnu/packages/python.scm gnu/packages/tex.scm guix/build-system/asdf.scm guix/build/emacs-build-system.scm guix/profiles.scm
2021-05-09gnu: ExifTool: Fix CVE-2021-22204Leo Famulari
* gnu/packages/patches/perl-image-exiftool-CVE-2021-22204.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/photo.scm (perl-image-exiftool)[source]: Use it.
2021-05-05gnu: Add tla2tools.Mike Gerwitz
This introduces tla2tools.jar, which contains the TLA+ model checker and simulator (TLC); a TLA+ REPL; a semantic analyzer (SANY); the TLATeX typesetting system; PlusCal translator; and more. I have added five wrapper scripts for convenience, rather than invoking `java' manually. The wrapper scripts are not comprehensive; users who are familiar with tla2tools.jar, or have read the book Specifying Systems, may still invoke the commands in the traditional way. The minimum JDK version is 11. I chose to stick with that rather than bumping it to 14 (which is the largest version currently in Guix) because each OpenJDK version in Guix depends on the version before it, and so it needlessly results in many 100s of MiB of unnecessary dependencies. Note that this is _not_ the TLA+ Toolbox, which is the GUI commonly used with TLA+. * gnu/packages/java.scm (tla2tools): New variable. * gnu/packages/patches/tla2tools-build-xml.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05gnu: racket: Remove obsolete patch.Philip McGrath
* gnu/packages/racket.scm (racket)[source](patches): Remove "racket-store-checksum-override.patch", which is no longer needed since we stopped injecting store paths into Racket files in commit 834aa48: see <https://issues.guix.gnu.org/47180>. * gnu/packages/patches/racket-store-checksum-override.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05gnu: racket: Move to (gnu packages racket).Philip McGrath
* gnu/packages/scheme.scm (racket,racket-minimal): Move to ... * gnu/packages/racket.scm: ... this new file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/racket.scm (racket)[synopsis]: Tweak. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-04gnu: busybox: Update to 1.33.1.Tobias Geerinckx-Rice
* gnu/packages/busybox.scm (busybox): Update to 1.33.1. [source]: Remove upstreamed patch. * gnu/packages/patches/busybox-CVE-2021-28831.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-05-01gnu: u-boot: Patch to fix boot regressions for some platforms.Vagrant Cascadian
The previous workaround stopped the preboot phase from loading USB support, which makes it impossible to use a USB keyboard to select a generation from the boot menu without using a serial console. * gnu/packages/patches/u-boot-rockchip-inno-usb.patch: New File. * gnu/local.mk (dist_patch_DATA): Add patch. * gnu/packages/bootloaders.scm (%u-boot-rockchip-inno-usb-patch): New variable. (u-boot)[source]: Add patch. (u-boot-rockpro64-rk3399, u-boot-pinebook-pro-rk3399): Remove obsolete phase.
2021-05-01gnu: Add emacs-geiser-guile.Morgan Smith
* gnu/packages/patches/emacs-geiser-guile-auto-activate.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it here. * gnu/packages/emacs-xyz.scm (emacs-geiser-guile): New variable. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-05-01gnu: emacs-geiser: Update to 0.13.Morgan Smith
* gnu/packages/patches/emacs-geiser-autoload-activate-implementation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it here. * gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.13. [source]: Change upstream URL. [build-system]: Change to emacs-build-system. [arguments]: Adjust accordingly. [native-inputs]: Remove emacs, autoconf, and automake. [description]: State that other packages are needed for geiser to be useful. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-28gnu: linux-libre-arm64-generic: Add eDP panel, battery and audioVagrant Cascadian
support for Pinebook Pro. * gnu/packages/linux.scm (linux-libre-5.11-source): Add Pinebook Pro lcd patch. (linux-libre-arm64-generic): Enable audio and battery modules for Pinebook Pro. * gnu/packages/patches/linux-libre-arm64-generic-pinebook-lcd.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch.
2021-04-28gnu: ungoogled-chromium: Update to 90.0.4430.93.Marius Bakke
* gnu/packages/patches/ungoogled-chromium-system-nspr.patch, gnu/packages/patches/ungoogled-chromium-system-opus.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 90. (debian-patch): Make REVISION optional, default to %DEBIAN-REVISION. (%chromium-version): New variable. (%ungoogled-revision): Set to 90.0.4430.85-1-11-g3184907. (%debian-revision): Set to debian/90.0.4430.85-1. (%debian-patches): Add more patches; update hashes. (%ungoogled-origin): Update hash. (%guix-patches): Remove obsolete patches. (libvpx/chromium): Update to 1.9.0-147-g61edec1ef. (ungoogled-chromium)[version]: Base on %CHROMIUM-REVISION and the last component of %UNGOOGLED-REVISION, a 'git describe --long' style ID. [arguments]: Add build_with_flite_lib in #:configure-flags. Add openjpeg substitution in #:phases.
2021-04-28gnu: LLVM, Clang: Add 12.0.0.Marius Bakke
* gnu/packages/patches/clang-12-tools-extra-directory.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/llvm.scm (llvm-12, clang-runtime-12, clang-12, clang-toolchain-12): New variables. (llvm-11): Inherit from LLVM-12.
2021-04-27gnu: gst-plugins-ugly: Fix some out-of-bounds reads.Leo Famulari
* gnu/packages/patches/gst-plugins-ugly-fix-out-of-bound-reads.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gst-plugins-ugly)[source]: Use it.
2021-04-27gnu: gst-plugins-base: Fix an invalid read when parsing ID3v2 tags.Leo Famulari
* gnu/packages/patches/gst-plugins-base-fix-id3v2-invalid-read.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gst-plugins-base)[source]: Use it.
2021-04-27gnu: gst-plugins-bad: Fix an overflow when processing video files.Leo Famulari
* gnu/packages/patches/gst-plugins-bad-fix-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gst-plugins-bad)[source]: Use it.
2021-04-27gnu: gst-libav: Fix a stack corruption bug.Leo Famulari
* gnu/packages/patches/gst-libav-64channels-stack-corruption.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gst-libav)[source]: Use it.
2021-04-27gnu: gst-plugins-good: Fix CVE-2021-3497 and CVE-2021-3498.Leo Famulari
* gnu/packages/patches/gst-plugins-good-CVE-2021-3497.patch, gnu/packages/patches/gst-plugins-good-CVE-2021-3498.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gstreamer.scm (gst-plugins-good)[source]: Use them.
2021-04-27gnu: GIMP: Update to 2.10.24.Leo Famulari
* gnu/packages/gimp.scm (gimp): Update to 2.10.24. [source]: Remove obsolete patch 'gimp-make-gegl-introspect-optional.patch'. * gnu/packages/patches/gimp-make-gegl-introspect-optional.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-04-25gnu: Add python-orange-canvas-core.Vinicius Monego
* gnu/packages/orange.scm: New file. * gnu/packages/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-23gnu: cairo: Reintroduce security patches [security fixes].宋文武
Two patches were accidentally removed in commit f94cdc86f644984ca83164d40b17e7eed6e22091. * gnu/packages/patches/cairo-CVE-2018-19876.patch, gnu/packages/patches/cairo-CVE-2020-35492.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gtk.scm (cairo)[patches]: Apply them.
2021-04-22gnu: glib: Disable failing test.Efraim Flashner
* gnu/packages/glib.scm (glib)[source]: Add patch. [arguments]: Remove custom 'increase-test-timeout phase. * gnu/packages/patches/glib-skip-failing-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2021-04-16Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
Conflicts: gnu/local.mk gnu/packages/boost.scm gnu/packages/chez.scm gnu/packages/compression.scm gnu/packages/crates-io.scm gnu/packages/docbook.scm gnu/packages/engineering.scm gnu/packages/gcc.scm gnu/packages/gl.scm gnu/packages/gtk.scm gnu/packages/nettle.scm gnu/packages/python-check.scm gnu/packages/python-xyz.scm gnu/packages/radio.scm gnu/packages/rust.scm gnu/packages/sqlite.scm guix/build-system/node.scm
2021-04-12gnu: racket: Don't inject store paths into Racket files.Philip McGrath
Apparently, during grafting, Guix can somehow mangle compiled Racket CS files (.zo) such that Racket will refuse to load them. (Maybe it has something to do with compression?) So, we stop patching Racket sources with absolute paths to store files (i.e. for foreign libraries to dlopen). Instead, we put them in a data file that doesn't get compiled or, in one case, embed it in C. Fixes https://issues.guix.gnu.org/47064 * gnu/packages/patches/racket-sh-via-rktio.patch: New file. Adds a special case at the C level, controlled by a preprocessor macro, to handle attempts to execute "/bin/sh". * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/scheme.scm (racket)[source](patches): Apply it. (racket)[arguments](#:configure-flags): Add the CPP flag to enable it. (racket)[arguments](#:modules): Use srfi-1. (racket)[arguments](#:phases): Remove 'patch-/bin/sh and 'pre-configure. Change 'pre-configure-minimal to just change directory. Add 'patch-config.rktd-lib-search-dirs after 'build and before 'install to configure Racket's "lib-search-dirs". (racket, racket-minimal)[inputs]: Add bash-minimal as an explicit input. (racket-minimal)[source]: Adjust to inherit patches from racket. (racket-minimal)[arguments]: Inherit from racket: changes no longer needed. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-11gnu: lksctp-tools: Fix build of include file.Hartmut Goebel
* gnu/packages/patches/lksctp-tools-1.0.18-fix-header-file-name.patch: New file. * gnu/local.mk[patches]: Add it. * gnu/packages/networking.scm(/lksctp-tools)[source]: Use this patch.
2021-04-09gnu: python-pyqt: Fix build for new python-sip.Brendan Tildesley
* gnu/packages/qt.scm (python-pyqt) [source]: Remove pyqt-public-sip.patch. [propagated-inputs]: Add python-pyqt5-sip. * gnu/packages/patches/pyqt-public-sip.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-04-09gnu: glibc: Update to 2.33.Ludovic Courtès
* gnu/packages/base.scm (glibc): Update to 2.33. [source]: Remove "glibc-hurd-signal-sa-siginfo.patch", now upstream. * gnu/packages/patches/glibc-hurd-clock_gettime_monotonic.patch: Update. * gnu/packages/patches/glibc-hurd-signal-sa-siginfo.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-04-05gnu: libvirt: Update to 7.2.0.Brice Waegeneire
* gnu/packages/virtualization.scm (libvirt): Update to 7.2.0. [arguemnts]: Switch to meson, only build system supported by upstream. [inputs]: Add libssh2 and readline. [native-inputs]: Add bash-completion, gettext, python-docutils and rpcsvc-proto. * gnu/packages/patches/libvirt-add-install-prefix.patch: New file... * gnu/local.mk: ...add it. * gnu/packages/patches/libvirt-create-machine-cgroup.patch: Delete file, merged by upstream. Tested-by: Pierre Langlois <pierre.langlois@gmx.com>
2021-04-05gnu: chez-scheme: simplify packagingPhilip McGrath
Take advantage of patches that have been accepted upstream. These changes lay a foundation for reusing more of Chez's build process for Racket. * gnu/packages/patches/chez-scheme-build-util-paths-backport.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/chez.scm (chez-scheme)[source](patches): Use it. [source](snippet): Remove bundled libraries here, not in configure phase. [inputs]: Organize. Move "nanopass", "stex", and "xorg-rgb" to ... [native-inputs]: ... this field. [arguments]: Add (ice-9 ftw) to #:modules. Remove unneeded 'patch-processor-detection' phase. Add 'unpack-nanopass+stex' phase (refactored from 'configure'). Simplify 'configure' phase by removing patches that have been upstreamed. Add "--nogzip-man-pages" flag so we can remove 'make-manpages-writable' phase. Stop ignoring #:configure-flags, move "--threads" there, and remove unneeded workaround. Add 'prepare-stex' phase (refactored from 'install-doc'). Use it to streamline 'install-doc' phase, installing all of the right files into the right places. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-02gnu: runc: Update to 1.0.0-rc93.Maxim Cournoyer
* gnu/packages/virtualization.scm (runc): Update to 1.0.0-rc93. [source]: Remove the patches field. [phases]{unpack}: Remove override. {build}: Add the man target. {check}: Make conditional based on TESTS?. {install}: Add the install-man target. [native-inputs]: Add go-github-com-go-md2man. [home-page]: Update. * gnu/packages/patches/runc-CVE-2019-5736.patch: Delete file. * gnu/local.mk: Un-register it.
2021-04-02gnu: containerd: Update to 1.4.4.Maxim Cournoyer
* gnu/packages/docker.scm (containerd): Update to 1.4.4. Delete trailing #t. [arguments]: Set a MAKE-FLAGS binding. [phases]{patch-paths}: Patch the reference to 'unpigz'. {build, install}: Use the MAKE-FLAGS variable. [inputs]: Add pigz. * gnu/packages/patches/containerd-test-with-go1.13.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Un-register it.
2021-04-02gnu: pidgin: Update to 2.14.2.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (pidgin): Update to 2.14.2. [source]: Remove pidgin-vv-gst.patch. * gnu/packages/patches/pidgin-vv-gst.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-04-02gnu: curl: Update to 7.76.0 [security fixes].Léo Le Bouter
Fixes CVE-2021-22876 and CVE-2021-22890. * gnu/packages/curl.scm (curl/fixed): New variable. (curl)[replacement]: New field. * gnu/packages/patches/curl-7.76-use-ssl-cert-env.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-04-02gnu: wpa-supplicant-minimal: Fix CVE-2021-30004.Léo Le Bouter
* gnu/packages/patches/wpa-supplicant-CVE-2021-30004.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/admin.scm (wpa-supplicant-minimal): Apply patch.
2021-04-02gnu: Add llhttp-bootstrap.Jelle Licht
* gnu/packages/patches/llhttp-bootstrap-CVE-2020-8287.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/node.scm (llhttp-bootstrap): New variable.
2021-04-02gnu: opendht: Update to 2.2.0rc4.Maxim Cournoyer
* gnu/packages/patches/opendht-fix-jami.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Un-register it. * gnu/packages/networking.scm (opendht): Update to 2.2.0rc4. [patches]: Remove field. [inputs]: Use nettle-3.7. [native-inputs]: Move restinio to... [propagated-inputs]: ... here.
2021-04-02Revert "gnu: libvirt: Update to 7.1.0."Pierre Langlois
The update causes virsh to fail <https://bugs.gnu.org/47541>. This reverts commit 383b02a370252c08eb1d43ac94d659c1d3993a35.
2021-04-01gnu: qemu-for-american-fuzzy-lop: Fix build.Efraim Flashner
* gnu/packages/debug.scm (qemu-for-american-fuzzy-lop)[source]: Add patch. * gnu/packages/patches/qemu-glibc-2.30.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2021-04-01gnu: gimp: Ship a copy of the gegl patch.Tobias Geerinckx-Rice
As Ludo' rightly points out, GitHub's patches are probably as stable as their tarballs. * gnu/packages/gimp.scm (gimp)[source]: Use SEARCH-PATCHES instead of an origin. * gnu/packages/patches/gimp-make-gegl-introspect-optional.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-03-31gnu: libvirt: Update to 7.1.0.Pierre Langlois
* gnu/packages/virtualization.scm (libvirt): Update to 7.1.0. [source]: Remove libvirt-create-machine-cgroup.patch, add libvirt-do-not-create-var-dirs.patch. [build-system]: Switch to meson-build-system. [arguments]: Use meson-0.55. Adapt #:configure-flags for meson, there is no need for --docdir anymore. Remove fix-BOURNE_SHELL-definition phase. Add fix-sysconfdir-and-localstatedir phase. Adapt disable-broken-tests to meson. [native-inputs]: Add python-docutils and rpcsvc-proto. * gnu/packages/patches/libvirt-create-machine-cgroup.patch: Delete. * gnu/packages/patches/libvirt-do-not-create-var-dirs.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add new patch, remove the other. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-03-30gnu: zstd: Downgrade to 1.4.4 and make security graft saner.Léo Le Bouter
* gnu/packages/patches/zstd-CVE-2021-24031_CVE-2021-24032.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/compression.scm (zstd-1.4.9): Remove. (zstd/fixed): New variable. Apply patch. (zstd)[replacement]: Graft with zstd/fixed.
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