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2020-07-12gnu: Remove ".git" from "https://github/…/….git".Ludovic Courtès
Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix swh) would sometimes return #f for these because the ".git" URLs are redirects to the non-".git" URLs. Consequently, 'guix lint -c archival' would keep saying "scheduled Software Heritage archival"; likewise, the fallback download code would fail. * gnu/packages/ada.scm, gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm, gnu/packages/android.scm, gnu/packages/animation.scm, gnu/packages/arcan.scm, gnu/packages/assembly.scm, gnu/packages/audio.scm, gnu/packages/authentication.scm, gnu/packages/avr.scm, gnu/packages/axoloti.scm, gnu/packages/backup.scm, gnu/packages/bash.scm, gnu/packages/benchmark.scm, gnu/packages/bioconductor.scm, gnu/packages/bioinformatics.scm, gnu/packages/bittorrent.scm, gnu/packages/boost.scm, gnu/packages/build-tools.scm, gnu/packages/c.scm, gnu/packages/calendar.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/chemistry.scm, gnu/packages/chez.scm, gnu/packages/clojure.scm, gnu/packages/code.scm, gnu/packages/compression.scm, gnu/packages/compton.scm, gnu/packages/coq.scm, gnu/packages/cpp.scm, gnu/packages/cran.scm, gnu/packages/crypto.scm, gnu/packages/curl.scm, gnu/packages/databases.scm, gnu/packages/datastructures.scm, gnu/packages/debug.scm, gnu/packages/disk.scm, gnu/packages/distributed.scm, gnu/packages/django.scm, gnu/packages/dlang.scm, gnu/packages/dns.scm, gnu/packages/docker.scm, gnu/packages/education.scm, gnu/packages/efi.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/embedded.scm, gnu/packages/emulators.scm, gnu/packages/engineering.scm, gnu/packages/erlang.scm, gnu/packages/fabric-management.scm, gnu/packages/file-systems.scm, gnu/packages/finance.scm, gnu/packages/firmware.scm, gnu/packages/flashing-tools.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/fpga.scm, gnu/packages/game-development.scm, gnu/packages/games.scm, gnu/packages/genealogy.scm, gnu/packages/genimage.scm, gnu/packages/geo.scm, gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/gnome-xyz.scm, gnu/packages/gnome.scm, gnu/packages/gnuzilla.scm, gnu/packages/golang.scm, gnu/packages/gpodder.scm, gnu/packages/graph.scm, gnu/packages/graphics.scm, gnu/packages/graphviz.scm, gnu/packages/groff.scm, gnu/packages/groovy.scm, gnu/packages/gtk.scm, gnu/packages/guile-xyz.scm, gnu/packages/guile.scm, gnu/packages/hardware.scm, gnu/packages/haskell-apps.scm, gnu/packages/haskell-xyz.scm, gnu/packages/hexedit.scm, gnu/packages/i2p.scm, gnu/packages/ibus.scm, gnu/packages/image-processing.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/ipfs.scm, gnu/packages/java-graphics.scm, gnu/packages/java-maths.scm, gnu/packages/java.scm, gnu/packages/javascript.scm, gnu/packages/jrnl.scm, gnu/packages/julia.scm, gnu/packages/jupyter.scm, gnu/packages/kodi.scm, gnu/packages/language.scm, gnu/packages/lego.scm, gnu/packages/less.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm, gnu/packages/lirc.scm, gnu/packages/lisp-xyz.scm, gnu/packages/llvm.scm, gnu/packages/logging.scm, gnu/packages/lolcode.scm, gnu/packages/lua.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/machine-learning.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/maths.scm, gnu/packages/maven.scm, gnu/packages/mes.scm, gnu/packages/messaging.scm, gnu/packages/monitoring.scm, gnu/packages/mpd.scm, gnu/packages/music.scm, gnu/packages/networking.scm, gnu/packages/node-xyz.scm, gnu/packages/ocaml.scm, gnu/packages/ocr.scm, gnu/packages/onc-rpc.scm, gnu/packages/opencl.scm, gnu/packages/opencog.scm, gnu/packages/pantheon.scm, gnu/packages/password-utils.scm, gnu/packages/patchutils.scm, gnu/packages/pdf.scm, gnu/packages/perl6.scm, gnu/packages/phabricator.scm, gnu/packages/popt.scm, gnu/packages/printers.scm, gnu/packages/prolog.scm, gnu/packages/protobuf.scm, gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/qt.scm, gnu/packages/radio.scm, gnu/packages/rails.scm, gnu/packages/rdf.scm, gnu/packages/rednotebook.scm, gnu/packages/rpc.scm, gnu/packages/rsync.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/screen.scm, gnu/packages/security-token.scm, gnu/packages/selinux.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/shellutils.scm, gnu/packages/simh.scm, gnu/packages/sml.scm, gnu/packages/ssh.scm, gnu/packages/statistics.scm, gnu/packages/stenography.scm, gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/synergy.scm, gnu/packages/telephony.scm, gnu/packages/terminals.scm, gnu/packages/tex.scm, gnu/packages/texinfo.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tmux.scm, gnu/packages/tor.scm, gnu/packages/toys.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/virtualization.scm, gnu/packages/vlang.scm, gnu/packages/vnc.scm, gnu/packages/vpn.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm, gnu/packages/wireservice.scm, gnu/packages/wm.scm, gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
2020-07-10gnu: linbox: Fix linking of dependant packages.Jakub Kądziołka
* gnu/packages/algebra.scm (linbox)[source]: Add a patch. [inputs]: Move fflas-ffpack to... [propagated-inputs]: ...here. * gnu/packages/patches/linbox-fix-pkgconfig.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2020-07-10gnu: arb: Build with flint 2.6.Jakub Kądziołka
Backport an upstream patch to fix a compatibility issue with flint 2.6. * gnu/packages/algebra.scm (arb): Add patch. * gnu/packages/patches/arb-flint-2.6.patch: New file. * gnu/local.mk (dist_patch_DATA): Register new file.
2020-07-10gnu: flint: Build with ntl.Jakub Kądziołka
* gnu/packages/algebra.scm (flint)[inputs]: Add ntl. [arguments]: Pass --with-ntl to configure.
2020-07-10gnu: flint: Update to 2.6.0.Jakub Kądziołka
* gnu/packages/algebra.scm (flint): Update to 2.6.0. * gnu/packages/patches/flint-ldconfig.patch: Remove the patch as it got applied upstream. * gnu/local.mk (dist_patch_DATA): Deregister the removed file.
2020-07-08gnu: giac: Update to 1.6.0-7.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.6.0-7.
2020-06-24gnu: symengine: Fix indentation.Nicolas Goaziou
* gnu/packages/algebra.scm (symengine): Fix indentation and apply small cosmetic fixes.
2020-06-24gnu: Add symengine.Vinicius Monego
* gnu/packages/algebra.scm (symengine): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-09gnu: singular: Update to 4.1.3p2.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (singular): Update to 4.1.3p2.
2020-06-05gnu: singular: Update to 4.1.3p1.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (singular): Update to 4.1.3p1.
2020-05-05Merge branch 'master' into core-updatesMarius Bakke
2020-05-04gnu: Add lmfit.Vincent Legoll
* gnu/packages/algebra.scm (lmfit): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-23Merge branch 'master' into core-updatesMarius Bakke
Conflicts: etc/news.scm gnu/local.mk gnu/packages/bootloaders.scm gnu/packages/linphone.scm gnu/packages/linux.scm gnu/packages/tls.scm gnu/system.scm
2020-04-22gnu: pari-gp: Update to 2.11.4.Andreas Enge
* gnu/packages/algebra.scm (pari-gp): Update to 2.11.4.
2020-04-08Merge branch 'master' into core-updatesMarius Bakke
Conflicts: etc/news.scm gnu/local.mk gnu/packages/check.scm gnu/packages/cross-base.scm gnu/packages/gimp.scm gnu/packages/java.scm gnu/packages/mail.scm gnu/packages/sdl.scm gnu/packages/texinfo.scm gnu/packages/tls.scm gnu/packages/version-control.scm
2020-04-07gnu: gp2c: Update to 0.0.11pl3.Andreas Enge
* gnu/packages/algebra.scm (gp2c): Update to 0.0.11pl3.
2020-04-07gnu: pari-gp: Update to 2.11.3.Andreas Enge
* gnu/packages/algebra.scm (pari-gp): Update to 2.11.3.
2020-03-30Merge branch 'master' into core-updatesMarius Bakke
Conflicts: gnu/packages/admin.scm gnu/packages/commencement.scm gnu/packages/guile.scm gnu/packages/linux.scm gnu/packages/package-management.scm gnu/packages/pulseaudio.scm gnu/packages/web.scm
2020-03-29algebra.scm: Add a copyright lineJakub Kądziołka
This is a follow-up to commit d96ad7fa1dcb12082db1acc07876f1ff219489df.
2020-03-29gnu: ntl: Update to 11.4.3.Jakub Kądziołka
* gnu/packages/algebra.scm (ntl): Update to 11.4.3. [source], [home-page]: Use https URL. [source](snippet): Remove bundled libtool. [inputs]: Add gf2x. [arguments](configure): Use invoke insteam of system*. Remove the no longer supported WIZARD argument. Add a LIBTOOL parameter, since it's now required. Enable building with gf2x. Pass the paths to dependencies explicitly. (eclib)[inputs]: Remove the transitive dependency on gmp, which is now handled automatically by libtool.
2020-03-29gnu: Remove packages deprecated for over a year.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (intel-gpu-tools): Remove variable. * gnu/packages/algebra.scm (giac-xcas): Likewise.
2020-03-18Merge branch 'master' into core-updatesMarius Bakke
2020-03-14Merge branch 'master' into core-updatesMarius Bakke
2020-03-17gnu: eigen: Update to 3.3.7.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (eigen): Update to 3.3.7. [source]: Add a patch to fix a test failure. * gnu/packages/patches/eigen-stabilise-sparseqr-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-03-10gnu: java-jlargearrays: Update source URI.Björn Höfling
* gnu/packages/algebra.scm (java-jlargearrays)[source]: Update URI.
2020-03-10gnu: java-jtransforms: Update source URI.Björn Höfling
* gnu/packages/algebra.scm (java-jtransforms)[source]: Update URI.
2020-03-04Merge branch 'master' into core-updatesMarius Bakke
2020-03-01gnu: lrcalc: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (lrcalc)[home-page]: Use HTTPS.
2020-03-01gnu: giac: Update to 1.5.0-87.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.5.0-87.
2020-02-17gnu: Follow multiprecision.org subdomain redirections.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (mpfrcx, cm)[home-page]: Follow permanent redirections.
2020-02-16gnu: Remove obsolete bootstrap workaround phases.Efraim Flashner
* gnu/packages/admin.scm (igt-gpu-tools)[arguments]: Don't set NOCONFIGURE environment variable. * gnu/packages/algebra.scm (givaro, fflas-ffpack, linbox), * gnu/packages/arcan.scm (xarcan), * gnu/packages/audio.scm (rtmidi), * gnu/packages/cinnamon.scm (cinnamon-desktop), * gnu/packages/gnome.scm (dia, libxklavier, byzanz), * gnu/packages/image-viewers.scm (geeqie), * gnu/packages/libusb.scm (libplist), * gnu/packages/mail.scm (libetpan), * gnu/packages/networking.scm (aircrack-ng), * gnu/packages/terminals.scm (tilda, kmscon), * gnu/packages/xorg.scm (xf86-video-intel, xcompmgr) [arguments]: Same.
2020-01-22gnu: Replace uses of 'libjpeg' with 'libjpeg-turbo'.Marius Bakke
* gnu/packages/abiword.scm (abiword)[inputs]: Change from LIBJPEG to LIBJPEG-TURBO. * gnu/packages/admin.scm (testdisk)[inputs]: Likewise. * gnu/packages/algebra.scm (giac)[inputs]: Likewise. * gnu/packages/animation.scm (synfig)[inputs]: Likewise. * gnu/packages/astronomy.scm (gnuastro, celestia)[inputs]: Likewise. * gnu/packages/cdrom.scm (dvdstyler)[inputs]: Likewise. * gnu/packages/cran.scm (r-jpeg, r-tiff, r-readbitmap)[inputs]: Likewise. * gnu/packages/cups.scm (cups-filters, hplip)[inputs]: Likewise. * gnu/packages/display-managers.scm (slim)[inputs]: Likewise. * gnu/packages/ebook.scm (fbreader)[inputs]: Likewise. * gnu/packages/emacs.scm (emacs)[inputs]: Likewise. * gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Likewise. * gnu/packages/fltk.scm (fltk, ntk)[inputs]: Likewise. * gnu/packages/fontutils.scm (fontforge)[inputs]: Likewise. * gnu/packages/freedesktop.scm (weston)[inputs]: Likewise. * gnu/packages/game-development.scm (sfml, allegro, aseprite, python-pygame, eureka, ioquake3)[inputs]: Likewise. * gnu/packages/games.scm (adanaxisgpl, freedroidrpg, irrlicht, minetest, fizmo, supertuxkart, gzdoom, xmoto, xonotic)[inputs]: Likewise. * gnu/packages/gd.scm (gd, perl-gd)[inputs]: Likewise. * gnu/packages/ghostscript.scm (lcms)[inputs]: Likewise. (ghostscript)[inputs, native-inputs]: Likewise. * gnu/packages/gimp.scm (gegl, gimp)[inputs]: Likewise. * gnu/packages/gnome.scm (libgnomeui, eog, tracker-miners, gthumb)[inputs]: Likewise. * gnu/packages/gnunet.scm (libextractor)[inputs]: Likewise. * gnu/packages/gnustep.scm (windowmaker)[inputs]: Likewise. * gnu/packages/graphics.scm (blender, blender-2.79, openimageio, openscenegraph, openscenegraph-3.4, povray, fgallery)[inputs]: Likewise. * gnu/packages/graphviz.scm (graphviz)[inputs]: Likewise. * gnu/packages/gstreamer.scm (gst-plugins-good)[inputs]: Likewise. * gnu/packages/gtk.scm (gdk-pixbuf)[inputs]: Likewise. * gnu/packages/image-processing.scm (dcmtk, mia, vtk, opencv, vips, nip2, vxl, insight-toolkit)[inputs]: Likewise. * gnu/packages/image-viewers.scm (gpicview, luminance-hdr)[inputs]: Likewise. * gnu/packages/image.scm (jpegoptim, libtiff, leptonica, imlib2, freeimage, vigra, libwebp, libmng, jasper, steghide, jp2a)[inputs]: Likewise. * gnu/packages/imagemagick.scm (imagemagick, graphicsmagick)[inputs]: Likewise. * gnu/packages/java.scm (icedtea-6, icedtea-7, openjdk9, openjdk11, openjdk12)[inputs]: Likewise. * gnu/packages/kde-frameworks.scm (khtml)[inputs]: Likewise. * gnu/packages/kodi.scm (kodi)[inputs]: Likewise. * gnu/packages/machine-learning.scm (dlib, tensorflow)[inputs]: Likewise. * gnu/packages/mate.scm (atril, eom)[inputs]: Likewise. * gnu/packages/maths.scm (hdf4, hdf-java, hdf-eos2, netcdf)[inputs]: Likewise. * gnu/packages/netpbm.scm (netpbm)[inputs]: Likewise. * gnu/packages/pdf.scm (zathura-pdf-mupdf, podofo, mupdf, fbida)[inputs]: Likewise. * gnu/packages/photo.scm (libraw, libpano13, enblend-enfuse, darktable, hugin, rawtherapee)[inputs]: Likewise. * gnu/packages/prolog.scm (swi-prolog)[native-inputs]: Likewise. * gnu/packages/python-xyz.scm (python-hdf4, python-pillow)[inputs]: Likewise. * gnu/packages/qt.scm (qtbase, qtwebkit)[inputs]: Likewise. * gnu/packages/rdesktop.scm (freerdp)[inputs]: Likewise. * gnu/packages/scanner.scm (sane-backends, xsane)[inputs]: Likewise. * gnu/packages/scheme.scm (racket)[inputs]: Likewise. * gnu/packages/scribus.scm (scribus)[inputs]: Likewise. * gnu/packages/sdl.scm (sdl-image)[propagated-inputs]: Likewise. (guile-sdl)[native-inputs]: Likewise. * gnu/packages/spice.scm (spice-gtk)[inputs]: Likewise. * gnu/packages/statistics.scm (r-with-tests)[inputs]: Likewise. * gnu/packages/tcl.scm (perl-tk)[inputs]: Likewise. * gnu/packages/upnp.scm (readymedia)[inputs]: Likewise. * gnu/packages/video.scm (mplayer, mpv, v4l-utils, motion)[inputs]: Likewise. * gnu/packages/web-browsers.scm (dillo, links)[inputs]: Likewise. * gnu/packages/web.scm (netsurf)[inputs]: Likewise. * gnu/packages/webkit.scm (webkitgtk)[inputs]: Likewise. * gnu/packages/wine.scm (wine)[inputs]: Likewise. * gnu/packages/wv.scm (wv)[inputs]: Likewise. * gnu/packages/wxwidgets.scm (wxwidgets, wxwidgets-2)[inputs]: Likewise. * gnu/packages/xdisorg.scm (xscreensaver)[inputs]: Likewise. * gnu/packages/xfce.scm (tumbler)[inputs]: Likewise. * gnu/packages/xfig.scm (xfig, transfig)[inputs]: Likewise. * gnu/packages/xorg.scm (xpra)[inputs]: Likewise.
2020-01-11Merge branch 'master' into core-updatesMarius Bakke
2019-12-30gnu: giac: Update to 1.5.0-85.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.5.0-85.
2019-12-05Merge branch 'master' into core-updatesMarius Bakke
2019-12-01gnu: giac: Update to 1.5.0-75.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.5.0-75.
2019-11-16Merge remote-tracking branch master into core-updatesMathieu Othacehe
2019-11-10gnu: Add 'file-name' where appropriate.Efraim Flashner
* gnu/packages/admin.scm (detox, neofetch), gnu/packages/algebra.scm (python-fpylll), gnu/packages/bioinformatics.scm (tbsp, genrich), gnu/packages/crypto.scm (hpenc), gnu/packages/digest.scm (xxhash), gnu/packages/emacs-xyz.scm (emacs-tiny, emacs-ergoemacs-mode, emacs-make-it-so, emacs-poet-theme, emacs-deft, emacs-scribble-mode, emacs-helm-mu, emacs-unidecode, emacs-diff-hl, emacs-helm-exwm, emacs-gif-screencast, emacs-exec-path-from-shell), gnu/packages/engineering.scm (gpx), gnu/packages/freedesktop.scm (waylandpp), gnu/packages/golang.scm (go-github-com-sirupsen-logrus, go-github-com-shirou-gopsutil), gnu/packages/guile-xyz.scm (guile-studio, guile-picture-language, jupyter-guile-kernel), gnu/packages/image-viewers.scm (qview), gnu/packages/java-maths.scm (java-jblas), gnu/packages/llvm.scm (libclc), gnu/packages/logging.scm (spdlog), gnu/packages/ocaml.scm (ocaml-cstruct, ocaml-zarith), gnu/packages/terminals.scm (libtsm), gnu/packages/tigervnc.scm (tigervnc-client), gnu/packages/xdisorg.scm (xcalib, xbanish) [source]: Add file-name.
2019-11-03gnu: xtensor: Update to 0.20.10.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (xtensor): Update to 0.20.10.
2019-10-30gnu: arb: Update to 2.17.0.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (arb): Update to 2.17.0. [home-page]: Replace with a working one.
2019-10-25gnu: giac: Update to 1.5.0-69.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (giac): Update to 1.5.0-69.
2019-10-10Merge branch 'master' into core-updatesMathieu Othacehe
2019-09-29gnu: giac: Update to 1.5.0-65.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.5.0-65.
2019-09-28gnu: xtensor: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (xtensor)[home-page]: Use HTTPS.
2019-09-28gnu: xtensor: Update to 0.20.9.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (xtensor): Update to 0.20.9.
2019-09-24gnu: bc: Fix cross-compilation.Mathieu Othacehe
* gnu/packages/patches/bc-fix-cross-compilation.patch: New patch file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/algebra.scm (bc)[origin]: Apply it, [native-inputs]: Add automake and autoconf, [arguments]: Add a new 'autogen phase that is needed by the new patch.
2019-09-10gnu: eclib: Update to 20190909.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (eclib): Update to 20190909.
2019-08-06Merge remote-tracking branch 'origin/master' into wip-texliveRicardo Wurmus
2019-08-02gnu: giac: Update to 1.5.0-63.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.5.0-63.
2019-07-24gnu: Replace uses of texlive-*-amsfonts.Ricardo Wurmus
* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Replace texlive-fonts-amsfonts and texlive-latex-amsfonts with texlive-amsfonts in texlive-union. * gnu/packages/docbook.scm (dblatex)[inputs]: Same. * gnu/packages/plotutils.scm (asymptote)[native-inputs]: Same. * gnu/packages/python-xyz.scm (python-numpy-documentation, python-matplotlib-documentation, python-ipython-documentation) [native-inputs]: Same. * gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Same. * gnu/packages/tex.scm (teximpatient)[native-inputs]: Same.
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