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path: root/gnu/packages/bioconductor.scm
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2020-03-01gnu: r-gkmsvm: Update to 0.80.0....* gnu/packages/bioconductor.scm (r-gkmsvm): Update to 0.80.0. [propagated-inputs]: Remove r-biocgenerics, r-biostrings, r-genomeinfodb, r-iranges, r-rtracklayer, and r-s4vectors. Ricardo Wurmus
2020-02-25gnu: Add r-bsgenome-hsapiens-ncbi-grch38....* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ncbi-grch38): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2020-02-22gnu: r-genomicinteractions: Update to 1.20.1....* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.20.1. Ricardo Wurmus
2020-02-22gnu: r-cicero: Update to 1.4.1....* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.1. [propagated-inputs]: Add r-tidyr. Ricardo Wurmus
2020-02-22gnu: r-ggm: Move to (gnu packages bioconductor)....* gnu/packages/cran.scm (r-ggm): Move this variable from here... * gnu/packages/bioconductor.scm (r-ggm): ...to here. Ricardo Wurmus
2020-02-19gnu: r-depecher: Update to 1.2.1....* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.1. Ricardo Wurmus
2020-02-19gnu: r-mixomics: Update to 6.10.8....* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.8. Ricardo Wurmus
2020-02-19gnu: r-rsubread: Update to 2.0.1....* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.0.1. Ricardo Wurmus
2020-02-19gnu: r-atacseqqc: Update to 1.10.2....* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.2. Ricardo Wurmus
2020-02-19gnu: r-heatplus: Update to 2.32.1....* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.32.1. Ricardo Wurmus
2020-02-19gnu: r-biocsingular: Update to 1.2.2....* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.2. Ricardo Wurmus
2020-02-19gnu: r-inspect: Update to 1.16.3....* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.3. Ricardo Wurmus
2020-02-19gnu: r-nmf: Update to 0.22.0....* gnu/packages/bioconductor.scm (r-nmf): Update to 0.22.0. [propagated-inputs]: Add r-biobase and r-biocmanager. Ricardo Wurmus
2020-02-19gnu: r-nmf: Move to (gnu packages bioconductor)....* gnu/packages/statistics.scm (r-nmf): Move this variable from here... * gnu/packages/bioconductor.scm (r-nmf): ...to here. Ricardo Wurmus
2020-02-11gnu: r-lpsymphony: Use HTTPS home page....* gnu/packages/bioconductor.scm (r-lpsymphony)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2020-02-11gnu: r-codedepends: Use HTTPS home page....* gnu/packages/bioconductor.scm (r-codedepends)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2020-02-11gnu: r-multiassayexperiment: Use HTTPS home page....* gnu/packages/bioconductor.scm (r-multiassayexperiment)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2020-01-27gnu: Add r-deconstructsigs....* gnu/packages/bioconductor.scm (r-deconstructsigs): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Roel Janssen
2020-01-27gnu: r-multiassayexperiment: Update to 1.12.2....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.2. Ricardo Wurmus
2020-01-27gnu: r-ropls: Update to 1.18.8....* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.8. Ricardo Wurmus
2020-01-27gnu: r-destiny: Update to 3.0.1....* gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.1. Ricardo Wurmus
2020-01-27gnu: r-metap: Update to 1.3....* gnu/packages/bioconductor.scm (r-metap): Update to 1.3. Ricardo Wurmus
2020-01-24gnu: r-biocset: Fix spelling of "ability"....* gnu/packages/bioconductor (r-biocset)[description]: Fix typo. Vagrant Cascadian
2020-01-21gnu: Use HTTPS for bioconductor.org....* gnu/packages/bioinformatics.scm (r-homo-sapiens)[source]: Use HTTPS. * gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked, r-cghcall, r-diffbind, r-cghbase, r-ripseeker, r-chippeakanno, r-qdnaseq, r-marray, r-multtest)[home-page]: Likewise. * gnu/packages/graph.scm (r-rgraphviz)[home-page]: Likewise. Tobias Geerinckx-Rice
2020-01-16gnu: r-variancepartition: Update to 1.16.1....* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.16.1. Ricardo Wurmus
2020-01-16gnu: r-flowworkspace: Update to 3.34.1....* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 3.34.1. Ricardo Wurmus
2020-01-16gnu: r-ropls: Update to 1.18.6....* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.6. Ricardo Wurmus
2020-01-16gnu: r-mlinterfaces: Update to 1.66.2....* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.2. [propagated-inputs]: Remove r-rda. Ricardo Wurmus
2020-01-16gnu: r-clusterprofiler: Update to 3.14.3....* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.3. Ricardo Wurmus
2020-01-16gnu: r-inspect: Update to 1.16.2....* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.2. Ricardo Wurmus
2020-01-16gnu: r-regioner: Update to 1.18.1....* gnu/packages/bioconductor.scm (r-regioner): Update to 1.18.1. Ricardo Wurmus
2020-01-16gnu: r-affycoretools: Update to 1.58.4....* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.4. [propagated-inputs]: Add r-glimma. Ricardo Wurmus
2019-12-27gnu: r-inspect: Update to 1.16.1....* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.1. [propagated-inputs]: Add r-gdata. Ricardo Wurmus
2019-12-27gnu: r-multiassayexperiment: Update to 1.12.1....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.1. Ricardo Wurmus
2019-12-27gnu: r-rgadem: Update to 2.34.1....* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.34.1. [propagated-inputs]: Add r-genomicranges. Ricardo Wurmus
2019-12-27gnu: r-clusterprofiler: Update to 3.14.2....* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.2. Ricardo Wurmus
2019-12-27gnu: r-enrichplot: Update to 1.6.1....* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.6.1. Ricardo Wurmus
2019-12-27gnu: r-biocsingular: Update to 1.2.1....* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.1. Ricardo Wurmus
2019-12-27gnu: r-affycoretools: Update to 1.58.3....* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.3. Ricardo Wurmus
2019-12-18gnu: Add r-biodist....* gnu/packages/bioconductor.scm (r-biodist): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-biocworkflowtools....* gnu/packages/bioconductor.scm (r-biocworkflowtools): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-biocset....* gnu/packages/bioconductor.scm (r-biocset): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-biocpkgtools....* gnu/packages/bioconductor.scm (r-biocpkgtools): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-biocor....* gnu/packages/bioconductor.scm (r-biocor): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-bioconcotk....* gnu/packages/bioconductor.scm (r-bioconcotk): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-multiassayexperiment....* gnu/packages/bioconductor.scm (r-multiassayexperiment): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-experimenthub....* gnu/packages/bioconductor.scm (r-experimenthub): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-biocgraph....* gnu/packages/bioconductor.scm (r-biocgraph): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-bioccasestudies....* gnu/packages/bioconductor.scm (r-bioccasestudies): New variable. Ricardo Wurmus
2019-12-18gnu: Add r-ebarrays....* gnu/packages/bioconductor.scm (r-ebarrays): New variable. Ricardo Wurmus
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