summaryrefslogtreecommitdiff
path: root/gnu/packages/bioconductor.scm
AgeCommit message (Collapse)Author
2023-05-09gnu: r-scran: Update to 1.28.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scran): Update to 1.28.1.
2023-05-09gnu: r-scuttle: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.10.1.
2023-05-09gnu: r-chromvar: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.22.1.
2023-05-09gnu: r-hdf5array: Update to 1.28.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.28.1. [propagated-inputs]: Add r-s4arrays.
2023-05-09gnu: r-s4vectors: Update to 0.38.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.1.
2023-05-09gnu: r-preprocesscore: Update to 1.62.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.62.1.
2023-05-09gnu: r-iclusterplus: Update to 1.36.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.36.1.
2023-05-09gnu: r-clusterprofiler: Update to 4.8.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.8.1.
2023-05-09gnu: r-dose: Update to 3.26.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dose): Update to 3.26.1.
2023-05-09gnu: r-linnorm: Update to 2.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.24.1.
2023-05-09gnu: r-dnacopy: Update to 1.74.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.74.1.
2023-05-09gnu: r-scaledmatrix: Update to 1.8.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scaledmatrix): Update to 1.8.1.
2023-05-09gnu: r-glmgampoi: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-glmgampoi): Update to 1.12.1.
2023-05-09gnu: r-oligo: Update to 1.64.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.64.1.
2023-05-09gnu: r-summarizedexperiment: Update to 1.30.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.30.1. [propagated-inputs]: Add r-s4arrays.
2023-05-09gnu: r-scmap: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scmap): Update to 1.22.1.
2023-05-09gnu: r-rhdf5filters: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.12.1.
2023-05-09gnu: r-pcaexplorer: Update to 2.26.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-pcaexplorer): Update to 2.26.1.
2023-05-09gnu: r-impute: Update to 1.74.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-impute): Update to 1.74.1.
2023-05-09gnu: r-genefilter: Update to 1.82.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.82.1.
2023-05-09gnu: r-edger: Update to 3.42.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.2.
2023-05-09gnu: r-deseq2: Update to 1.40.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.40.1.
2023-05-09gnu: r-biocparallel: Update to 1.34.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.1.
2023-05-09gnu: r-annotationdbi: Update to 1.62.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.1.
2023-05-09gnu: r-densvis: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.1.
2023-05-09gnu: r-delayedarray: Update to 0.26.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.2. [propagated-inputs]: Add r-s4arrays.
2023-05-09gnu: r-bandits: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bandits): Update to 1.16.1.
2023-05-09gnu: r-bambu: Update to 3.2.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.2.
2023-05-09gnu: r-amplican: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-amplican): Update to 1.22.1. [propagated-inputs]: Remove r-clustercrit; add r-cluster.
2023-05-09gnu: r-affyplm: Update to 1.76.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-affyplm): Update to 1.76.1.
2023-05-09gnu: Add r-s4arrays.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-s4arrays): New variable.
2023-05-09gnu: r-ggpicrust2: Update to 1.6.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.6.3.
2023-05-09gnu: r-biomartr: Update to 1.0.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.3.
2023-05-08gnu: Add r-multibac.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-multibac): New variable.
2023-05-02gnu: Add r-ggpicrust2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ggpicrust2): New variable.
2023-05-02gnu: Add r-microbiomestat.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-microbiomestat): New variable.
2023-05-02gnu: Add r-lefser.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-lefser): New variable.
2023-04-29gnu: r-motifstack: Update to 1.44.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.44.1.
2023-04-29gnu: r-chippeakanno: Update to 3.34.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.34.1.
2023-04-29gnu: r-hpar: Avoid internet access.Ricardo Wurmus
ExperimentHub::createHubAccessors needs internet access. When R tests if the package can be loaded it runs zzz.R, which contains the call to createHubAccessors. We set the variable GUIX_BUILD to conditionally disable this call. * gnu/packages/bioconductor.scm (r-hpar)[arguments]: Add two build phases: 'set-HOME and 'avoid-internet-access.
2023-04-29gnu: r-phyloseq: Update to 1.44.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.44.0.
2023-04-29gnu: r-tximeta: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.0.
2023-04-29gnu: r-tricycle: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.8.0.
2023-04-29gnu: r-biscuiteer: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.14.0.
2023-04-29gnu: r-omnipathr: Update to 3.8.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.8.0.
2023-04-29gnu: r-omicade4: Update to 1.40.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.40.0.
2023-04-29gnu: r-dmrseq: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.20.0.
2023-04-29gnu: r-dada2: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.28.0.
2023-04-29gnu: r-bsseq: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.36.0.
2023-04-29gnu: r-biotmle: Update to 1.24.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.24.0.
generated by cgit v1.2.3 (git 2.47.1) at 2025-01-07 11:35:56 +0000