| Age | Commit message (Expand) | Author |
|---|---|---|
| 2018-11-09 | gnu: r-ensembldb: Update to 2.6.1....* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.1. | Ricardo Wurmus |
| 2018-11-09 | gnu: r-biostrings: Update to 2.50.1....* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.50.1. | Ricardo Wurmus |
| 2018-11-09 | gnu: r-biocviews: Update to 1.50.5....* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.50.5. | Ricardo Wurmus |
| 2018-11-08 | gnu: pplacer-scripts: Use INVOKE....* gnu/packages/bioinformatics.scm (pplacer-scripts)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: roary: Use INVOKE....* gnu/packages/bioinformatics.scm (roary)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: seek: Use INVOKE....* gnu/packages/bioinformatics.scm (seek)[arguments]: Use INVOKE and return #T unconditionally; patch "gen_tools_am" shebang in "bootstrap" phase. | Ricardo Wurmus |
| 2018-11-08 | gnu: sailfish: Use INVOKE....* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use INVOKE instead of SYSTEM*. | Ricardo Wurmus |
| 2018-11-08 | gnu: vsearch: Update to 2.9.1....* gnu/packages/bioinformatics.scm (vsearch): Update to 2.9.1. * gnu/packages/patches/vsearch-unbundle-cityhash.patch: Update. | Ricardo Wurmus |
| 2018-11-08 | gnu: sra-tools: Update to 2.9.3....* gnu/packages/bioinformatics.scm (sra-tools): Update to 2.9.3. [arguments]: Remove build phase patch-away-glibc-conflict. | Ricardo Wurmus |
| 2018-11-08 | gnu: plink-ng: Fetch sources from git....* gnu/packages/bioinformatics.scm (plink-ng)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-08 | gnu: ncbi-vdb: Update to 2.9.3....* gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.9.3. | Ricardo Wurmus |
| 2018-11-08 | gnu: ngs-sdk: Update to 2.9.3....* gnu/packages/bioinformatics.scm (ngs-sdk): Update to 2.9.3. | Ricardo Wurmus |
| 2018-11-08 | gnu: ngs-sdk: Use INVOKE....* gnu/packages/bioinformatics.scm (ngs-sdk)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: emboss: Use INVOKE....* gnu/packages/bioinformatics.scm (emboss)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: taxtastic: Use INVOKE....* gnu/packages/bioinformatics.scm (taxtastic)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: sra-tools: Use INVOKE....* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: muscle: Use INVOKE....* gnu/packages/bioinformatics.scm (muscle)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: newick-utils: Remove custom autoconf phase....* gnu/packages/bioinformatics.scm (newick-utils)[arguments]: Remove. | Ricardo Wurmus |
| 2018-11-08 | gnu: mash: Remove custom autoconf phase....* gnu/packages/bioinformatics.scm (mash)[arguments]: Remove autoconf phase. | Ricardo Wurmus |
| 2018-11-08 | gnu: vsearch: Remove custom autogen phase....* gnu/packages/bioinformatics.scm (vsearch)[arguments]: Remove. | Ricardo Wurmus |
| 2018-11-08 | gnu: java-picard-1.113: Use INVOKE....* gnu/packages/bioinformatics.scm (java-picard-1.113)[arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: fraggenescan: Use INVOKE....* gnu/packages/bioinformatics.scm (fraggenescan)[arguments]: Use INVOKE in build phases and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-08 | gnu: sailfish: Fetch sources from git....* gnu/packages/bioinformatics.scm (sailfish)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-08 | gnu: ngs-sdk: Fetch sources from git....* gnu/packages/bioinformatics.scm (ngs-sdk)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-08 | gnu: ncbi-vdb: Use INVOKE and end phases on #T....* gnu/packages/bioinformatics.scm (ncbi-vdb)[arguments]: Use INVOKE and unconditionally end phases with #T. | Ricardo Wurmus |
| 2018-11-08 | gnu: ncbi-vdb: Fetch sources from git....* gnu/packages/bioinformatics.scm (ncbi-vdb)[source]: Fetch from git. [arguments]: Add phase to make checkout writable. | Ricardo Wurmus |
| 2018-11-08 | gnu: tadbit: Fetch sources from git....* gnu/packages/bioinformatics.scm (tadbit)[source]: Fetch from git. [version]: Use "2.0.0" instead of "2.0". | Ricardo Wurmus |
| 2018-11-07 | gnu: filevercmp: Fetch sources from git....* gnu/packages/bioinformatics.scm (filevercmp)[source]: Fetch from git. [arguments]: Add #T to the end of the install phase. | Ricardo Wurmus |
| 2018-11-07 | gnu: ritornello: Update to 2.0.1....* gnu/packages/bioinformatics.scm (ritornello): Update to 2.0.1. [arguments]: Adjust file patching. | Ricardo Wurmus |
| 2018-11-07 | gnu: ritornello: Fetch sources from git....* gnu/packages/bioinformatics.scm (ritornello)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: snap-aligner: Fetch sources from git....* gnu/packages/bioinformatics.scm (snap-aligner)[source]: Fetch from git. [arguments]: Use INVOKE. | Ricardo Wurmus |
| 2018-11-07 | gnu: sortmerna: Fetch sources from git....* gnu/packages/bioinformatics.scm (sortmerna)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: vsearch: Fetch source from git....* gnu/packages/bioinformatics.scm (vsearch)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: preseq: Update to 2.0.3....* gnu/packages/bioinformatics.scm (preseq): Update to 2.0.3. | Ricardo Wurmus |
| 2018-11-07 | gnu: preseq: Fetch sources from git....* gnu/packages/bioinformatics.scm (preseq)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: seqtk: Update to 1.3....* gnu/packages/bioinformatics.scm (seqtk): Update to 1.3. [source]: Remove outdated snippet. [arguments]: Use INVOKE and return #T unconditionally. | Ricardo Wurmus |
| 2018-11-07 | gnu: seqtk: Fetch sources from git....* gnu/packages/bioinformatics.scm (seqtk)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: raxml: Update to 8.2.12....* gnu/packages/bioinformatics.scm (raxml): Update to 8.2.12. | Ricardo Wurmus |
| 2018-11-07 | gnu: python2-biom-format: Fix build....This is a follow-up to commit 239716fb0ba0a7cd81f9d59dcf5a2261b8efe4fa. * gnu/packages/bioinformatics.scm (python2-biom-format)[arguments]: Modify phases of base package. | Ricardo Wurmus |
| 2018-11-07 | gnu: raxml: Fetch sources from git....* gnu/packages/bioinformatics.scm (raxml)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: pyicoteo: Fetch sources from git....* gnu/packages/bioinformatics.scm (pyicoteo)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: sra-tools: Fetch sources from git....* gnu/packages/bioinformatics.scm (sra-tools)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: libgff: Fetch sources from git....* gnu/packages/bioinformatics.scm (libgff)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: kentutils: Fetch sources from git....* gnu/packages/bioinformatics.scm (kentutils)[source]: Fetch from git. [arguments]: Add phase "fix-permissions". | Ricardo Wurmus |
| 2018-11-07 | gnu: r-seqgl: Fetch sources from git....* gnu/packages/bioinformatics.scm (r-seqgl)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: pplacer: Fetch sources from git....* gnu/packages/bioinformatics.scm (pplacer)[source]: Fetch from git. [arguments]: Make files writable; use INVOKE. | Ricardo Wurmus |
| 2018-11-07 | gnu: minced: Update to 0.3.2....* gnu/packages/bioinformatics.scm (minced): Update to 0.3.2. | Ricardo Wurmus |
| 2018-11-07 | gnu: minced: Fetch sources from git....* gnu/packages/bioinformatics.scm (minced)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: metabat: Fetch sources from git....* gnu/packages/bioinformatics.scm (metabat)[source]: Fetch from git. | Ricardo Wurmus |
| 2018-11-07 | gnu: mash: Update to 2.1....* gnu/packages/bioinformatics.scm (mash): Update to 2.1. | Ricardo Wurmus |
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