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2019-05-06gnu: r-rhdf5: Update to 2.28.0....* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.28.0. Ricardo Wurmus
2019-05-06gnu: r-tximport: Update to 1.12.0....* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.0. Ricardo Wurmus
2019-05-06gnu: r-mutationalpatterns: Update to 1.10.0....* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.10.0. Ricardo Wurmus
2019-05-06gnu: r-bamsignals: Update to 1.16.0....* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.16.0. Ricardo Wurmus
2019-05-06gnu: r-rhtslib: Update to 1.16.1....* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1. Ricardo Wurmus
2019-05-06gnu: r-zlibbioc: Update to 1.30.0....* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0. Ricardo Wurmus
2019-05-06gnu: r-motifrg: Update to 1.28.0....* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0. Ricardo Wurmus
2019-05-06gnu: r-seqlogo: Update to 1.50.0....* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0. Ricardo Wurmus
2019-05-06gnu: r-genomation: Update to 1.16.0....* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.16.0. Ricardo Wurmus
2019-05-06gnu: r-seqpattern: Update to 1.16.0....* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.16.0. Ricardo Wurmus
2019-05-06gnu: r-bsgenome: Update to 1.52.0....* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.52.0. Ricardo Wurmus
2019-05-06gnu: r-topgo: Update to 2.36.0....* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.36.0. Ricardo Wurmus
2019-05-06gnu: r-genomicfeatures: Update to 1.36.0....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.0. Ricardo Wurmus
2019-05-06gnu: r-rtracklayer: Update to 1.44.0....* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.0. Ricardo Wurmus
2019-05-06gnu: r-genomicalignments: Update to 1.20.0....* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.0. Ricardo Wurmus
2019-05-06gnu: r-summarizedexperiment: Update to 1.14.0....* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.0. Ricardo Wurmus
2019-05-06gnu: r-delayedarray: Update to 0.10.0....* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.10.0. [propagated-inputs]: Add r-matrix. Ricardo Wurmus
2019-05-06gnu: r-biostrings: Update to 2.52.0....* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.52.0. Ricardo Wurmus
2019-05-06gnu: r-biocparallel: Update to 1.18.0....* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.0. Ricardo Wurmus
2019-05-06gnu: r-biomart: Update to 2.40.0....* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.0. Ricardo Wurmus
2019-05-06gnu: r-annotationdbi: Update to 1.46.0....* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.0. Ricardo Wurmus
2019-05-06gnu: r-biobase: Update to 2.44.0....* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.44.0. Ricardo Wurmus
2019-05-06gnu: r-genomicranges: Update to 1.36.0....* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.0. Ricardo Wurmus
2019-05-06gnu: r-xvector: Update to 0.24.0....* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.24.0. Ricardo Wurmus
2019-05-06gnu: r-limma: Update to 3.40.0....* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.0. Ricardo Wurmus
2019-05-06gnu: r-variantannotation: Update to 1.30.0....* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.0. [propagated-inputs]: Add r-rhtslib. Ricardo Wurmus
2019-05-06gnu: r-edger: Update to 3.26.0....* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.0. Ricardo Wurmus
2019-05-06gnu: r-genomeinfodb: Update to 1.20.0....* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.20.0. Ricardo Wurmus
2019-05-06gnu: r-iranges: Update to 2.18.0....* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.0. Ricardo Wurmus
2019-05-06gnu: r-s4vectors: Update to 0.22.0....* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.0. Ricardo Wurmus
2019-05-06gnu: r-bioccheck: Update to 1.20.0....* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.20.0. Ricardo Wurmus
2019-05-06gnu: r-biocstyle: Update to 2.12.0....* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.12.0. Ricardo Wurmus
2019-05-06gnu: r-biocviews: Update to 1.52.0....* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.0. Ricardo Wurmus
2019-05-06gnu: r-grohmm: Update to 1.18.0....* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.18.0. Ricardo Wurmus
2019-05-06gnu: r-shortread: Update to 1.42.0....* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.42.0. Ricardo Wurmus
2019-05-06gnu: r-gostats: Update to 2.50.0....* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.50.0. Ricardo Wurmus
2019-05-06gnu: r-category: Update to 2.50.0....* gnu/packages/bioinformatics.scm (r-category): Update to 2.50.0. Ricardo Wurmus
2019-05-06gnu: r-gseabase: Update to 1.46.0....* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.46.0. Ricardo Wurmus
2019-05-06gnu: r-rbgl: Update to 1.60.0....* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.60.0. [propagated-inputs]: Add r-bh. Ricardo Wurmus
2019-05-06gnu: r-annotationforge: Update to 1.26.0....* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.26.0. Ricardo Wurmus
2019-05-06gnu: r-dexseq: Update to 1.30.0....* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.30.0. Ricardo Wurmus
2019-05-06gnu: r-deseq2: Update to 1.24.0....* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.24.0. Ricardo Wurmus
2019-05-06gnu: r-genefilter: Update to 1.66.0....* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.66.0. Ricardo Wurmus
2019-04-27gnu: r-rhtslib: Fix build....* gnu/packages/bioinformatics.scm (r-rhtslib)[arguments]: Add "--no-staged-install" to configure flags. Ricardo Wurmus
2019-04-27gnu: r-ggbio: Fix build....* gnu/packages/bioinformatics.scm (r-ggbio)[arguments]: Add build phase to patch out typo. Ricardo Wurmus
2019-04-26gnu: Add umi-tools....* gnu/packages/bioinformatics.scm (umi-tools): New variable. Ricardo Wurmus
2019-04-19gnu: r-seurat: Update to 3.0.0....* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.0.0. [propagated-inputs]: Remove r-dosnow, r-dplyr, r-dtw, r-foreach, r-fpc, r-gplots, r-hdf5r, r-hmisc, r-httr, r-lars, r-mixtools, r-reshape2, and r-tidyr; add r-future, r-future-apply, r-ggrepel, r-kernsmooth, r-rlang, r-rsvd, r-scales, and r-sctransform. Ricardo Wurmus
2019-04-11gnu: r-genomicfeatures: Update to 1.34.8....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.8. Ricardo Wurmus
2019-04-11gnu: Add python2-checkm-genome....* gnu/packages/bioinformatics.scm (python2-checkm-genome): New variable. Ricardo Wurmus
2019-04-11gnu: Add pplacer....* gnu/packages/bioinformatics.scm (pplacer, pplacer-scripts): New variables. Ricardo Wurmus
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