summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2018-02-19gnu: r-scater: Update to 1.6.3....* gnu/packages/bioinformatics.scm (r-scater): Update to 1.6.3. Ricardo Wurmus
2018-02-19gnu: r-gviz: Update to 1.22.3....* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.3. Ricardo Wurmus
2018-02-19gnu: r-gprofiler: Update to 0.6.4....* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.4. Ricardo Wurmus
2018-02-19gnu: r-ensembldb: Update to 2.2.2....* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.2. Ricardo Wurmus
2018-02-19gnu: r-seurat: Update to 2.2.1....* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.1. [propagated-inputs]: Remove r-nmf; add r-metap. Ricardo Wurmus
2018-02-19gnu: r-qtl: Update to 1.42-7....* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-7. Ricardo Wurmus
2018-02-19gnu: r-genomicranges: Update to 1.30.2....* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.2. Ricardo Wurmus
2018-02-19gnu: r-getopt: Update to 1.20.2....* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.2. Ricardo Wurmus
2018-02-19gnu: r-bookdown: Update to 0.7....* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.7. [propagated-inputs]: Add r-tinytex. Ricardo Wurmus
2018-02-18Merge branch 'master' into core-updatesRicardo Wurmus
2018-02-17gnu: vsearch: Update to 2.7.1....* gnu/packages/bioinformatics.scm (vsearch): Update to 2.7.1. Ben Woodcroft
2018-02-16Merge branch 'master' into core-updatesMark H Weaver
2018-02-16gnu: diamond: Update to 0.9.18....* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.18. Ben Woodcroft
2018-02-15gnu: Add python-loompy....* gnu/packages/bioinformatics.scm (python-loompy): New variable. Ricardo Wurmus
2018-02-15gnu: Add r-dropbead....* gnu/packages/bioinformatics.scm (r-dropbead): New variable. Ricardo Wurmus
2018-02-15gnu: Add r-delayedmatrixstats....* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): New variable. Ricardo Wurmus
2018-02-14Merge branch 'master' into core-updatesMark H Weaver
2018-02-14gnu: vsearch: Update to 2.7.0....* gnu/packages/bioinformatics.scm (vsearch): Update to 2.7.0. Ben Woodcroft
2018-02-13Merge branch 'master' into core-updatesMark H Weaver
2018-02-13gnu: r-gprofiler: Update to 0.6.3....* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.3. Ricardo Wurmus
2018-02-13gnu: r-ensembldb: Update to 2.2.1....* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.1. Ricardo Wurmus
2018-02-13gnu: r-gage: Update to 2.28.2....* gnu/packages/bioinformatics.scm (r-gage): Update to 2.28.2. Ricardo Wurmus
2018-02-13gnu: r-keggrest: Update to 1.18.1....* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.18.1. Ricardo Wurmus
2018-02-13gnu: r-seurat: Update to 2.2.0....* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.0. [propagated-inputs]: Remove r-ggjoy; add r-rcppeigen and r-ggridges. Ricardo Wurmus
2018-02-13gnu: r-msnbase: Update to 2.4.2....* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.4.2. Ricardo Wurmus
2018-02-13gnu: r-methylkit: Update to 1.4.1....* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.4.1. Ricardo Wurmus
2018-02-13gnu: r-gkmsvm: Update to 0.79.0....* gnu/packages/bioinformatics.scm (r-gkmsvm): Update to 0.79.0. Ricardo Wurmus
2018-02-13gnu: r-wgcna: Update to 1.62....* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.62. Ricardo Wurmus
2018-02-13gnu: r-genomation: Update to 1.11.3....* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.11.3. Ricardo Wurmus
2018-02-13gnu: r-genomicfeatures: Update to 1.30.3....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.30.3. Ricardo Wurmus
2018-02-13gnu: r-rtracklayer: Update to 1.38.3....* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.3. Ricardo Wurmus
2018-02-13gnu: r-summarizedexperiment: Update to 1.8.1....* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.8.1. Ricardo Wurmus
2018-02-13gnu: r-biomart: Update to 2.34.2....* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.34.2. Ricardo Wurmus
2018-02-13gnu: r-genomicranges: Update to 1.30.1....* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.1. Ricardo Wurmus
2018-02-13gnu: r-limma: Update to 3.34.8....* gnu/packages/bioinformatics.scm (r-limma): Update to 3.34.8. Ricardo Wurmus
2018-02-13gnu: r-variantannotation: Update to 1.24.5....* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.24.5. Ricardo Wurmus
2018-02-13gnu: r-edger: Update to 3.20.8....* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.8. Ricardo Wurmus
2018-02-13gnu: r-bookdown: Update to 0.6....* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.6. [propagated-inputs]: Add r-xfun and ghc-pandoc. Ricardo Wurmus
2018-02-13gnu: r-vegan: Update to 2.4-6....* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-6. Ricardo Wurmus
2018-02-12gnu: Add r-scran....* gnu/packages/bioinformatics.scm (r-scran): New variable. Ricardo Wurmus
2018-02-12gnu: Add r-scater....* gnu/packages/bioinformatics.scm (r-scater): New variable. Co-authored-by: Raoul Jean Pierre Bonnal <ilpuccio.febo@gmail.com> Ricardo Wurmus
2018-02-12gnu: Add r-singlecellexperiment....* gnu/packages/bioinformatics.scm (r-singlecellexperiment): New variable. Ricardo Wurmus
2018-02-12gnu: Add r-beachmat....* gnu/packages/bioinformatics.scm (r-beachmat): New variable. Ricardo Wurmus
2018-02-12gnu: Add r-rhdf5lib....* gnu/packages/bioinformatics.scm (r-rhdf5lib): New variable. Ricardo Wurmus
2018-02-11gnu: Add r-hdf5array....* gnu/packages/bioinformatics.scm (r-hdf5array): New variable. Ricardo Wurmus
2018-02-07gnu: multiqc: Update to 1.4....* gnu/packages/bioinformatics.scm (multiqc): Update to 1.4. [propagated-inputs]: Remove PYTHON-ENUM34. Marius Bakke
2018-02-03Merge branch 'master' into core-updatesMark H Weaver
2018-02-02gnu: diamond: Update to 0.9.17....* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.17. Ben Woodcroft
2018-02-01Merge branch 'master' into core-updatesMarius Bakke
2018-01-27gnu: diamond: Update to 0.9.16....* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.16. Ben Woodcroft