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2021-07-24gnu: Use 'search-input-directory' when looking for C/C++ library headers....* gnu/packages/arcan.scm (arcan)[arguments]: Use 'search-input-directory' for "include/libdrm" and "include/apr-1". * gnu/packages/bioinformatics.scm (sailfish): Likewise for jellyfish. * gnu/packages/boost.scm (boost-for-irods): Likewise for libcxx headers. * gnu/packages/cedille.scm (cedille): Likewise for IAL headers. * gnu/packages/compression.scm (snappy-with-clang6): Likewise for libcxx headers. * gnu/packages/cups.scm (hplip): Likewise for libusb headers. * gnu/packages/emulators.scm (pcsxr): Likewise for libcdio headers. * gnu/packages/game-development.scm (python2-renpy): Likewise for fribidi headers. * gnu/packages/games.scm (pokerth): Likewise for libircclient. * gnu/packages/guile-xyz.scm (guile-persist): Likewise for Guile. * gnu/packages/hurd.scm (hurd): Likewise for libtirpc. * gnu/packages/irods.scm (irods, irods-client-icommands): Likewise for libcxx, catch2, and nlohmann-json-cpp. * gnu/packages/julia.scm (julia): Use 'search-input-file' for libuv's errno.h. * gnu/packages/kde-pim.scm (kdepim-runtime): Use 'search-input-directory' for "include/KF5". (kmessagelib): Likewise. * gnu/packages/kde.scm (kdeconnect): Likewise. * gnu/packages/llvm.scm (clang-runtime-3.5): Likewise for libtirpc. * gnu/packages/mpi.scm (openmpi): Likewise for "include/infiniband". * gnu/packages/pumpio.scm (pumpa): Use 'search-input-file' for "tidy.h" and "aspell.h". * gnu/packages/radio.scm (dream): Use 'search-input-file' and 'search-input-directory' for pulseaudio, sndfile, etc. * gnu/packages/selinux.scm (policycoreutils): Likewise for PAM and libaudit. * gnu/packages/serialization.scm (avro-cpp-1.9-for-irods): Likewise for libcxx. * gnu/packages/sync.scm (nextcloud-client): Likewise for "include/KF5". * gnu/packages/video.scm (mkvtoolnix): Likewise for "include/gtest". (libopenshot): Likewise for "include/UnitTest++". * gnu/packages/virtualization.scm (criu): Likewise for libnl3 and for protobuf file. Ludovic Courtès
2021-07-24gnu: Use 'search-input-directory' when looking for tzdata....* gnu/packages/backup.scm (duplicity)[arguments]: Use 'search-input-directory' for "share/zoneinfo". * gnu/packages/bioinformatics.scm (pigx-rnaseq): Likewise. (pigx-bsseq): Likewise. * gnu/packages/calcurse.scm (calcurse): Likewise. * gnu/packages/calendar.scm (date): Likewise. * gnu/packages/compression.scm (lhasa): Likewise. * gnu/packages/cran.scm (r-rstan): Likewise. * gnu/packages/django.scm (python-django): Likewise. * gnu/packages/dlang.scm (ldc-bootstrap): Likewise. * gnu/packages/finance.scm (ledger): Likewise. * gnu/packages/glib.scm (glib): Likewise. * gnu/packages/golang.scm (go-1.4): Likewise. (go-1.14): Likewise. * gnu/packages/kde-frameworks.scm (kcalendarcore): Likewise. (kdelibs4support): Likewise. * gnu/packages/kodi.scm (kodi): Likewise. * gnu/packages/mail.scm (mu): Likewise. * gnu/packages/perl.scm (perl-libtime-parsedate): Likewise. * gnu/packages/python-xyz.scm (python-robotframework): Likewise. (python-dparse): Likewise. * gnu/packages/rrdtool.scm (rrdtool): Likewise. * gnu/packages/statistics.scm (r-with-tests): Likewise. * gnu/packages/vim.scm (vim): Likewise. * gnu/packages/virtualization.scm (ganeti): Likewise. * gnu/packages/vpn.scm (strongswan): Likewise. * gnu/packages/xfce.scm (xfce4-panel): Likewise. * gnu/packages/mate.scm (libmateweather): Use 'search-input-file' for "share/zoneinfo/zone.tab". Ludovic Courtès
2021-07-18Merge branch 'master' into core-updatesLudovic Courtès
2021-07-04gnu: tarlz: Update to 0.21....* gnu/packages/compression.scm (tarlz): Update to 0.21. Tobias Geerinckx-Rice
2021-07-01gnu: libzip: Support Zstandard....* gnu/packages/compression.scm (libzip)[native-inputs]: Add pkg-config. [inputs]: Add zstd:lib. Tobias Geerinckx-Rice
2021-07-01gnu: libzip: Update to 1.8.0....* gnu/packages/compression.scm (libzip): Update to 1.8.0. Tobias Geerinckx-Rice
2021-07-01gnu: Add squashfs-tools-ng....* gnu/packages/compression.scm (squashfs-tools-ng): New public variable. Tobias Geerinckx-Rice
2021-07-01gnu: squashfs-tools: Update description....* gnu/packages/compression.scm (squashfs-tools)[description]: Don't mention zlib; compact discs; youth. Tobias Geerinckx-Rice
2021-07-01gnu: squashfs-tools: Update to 4.4-git.1....* gnu/packages/compression.scm (squashfs-tools): Update to 4.4-git.1. [source]: Remove obsolete snippet. Tobias Geerinckx-Rice
2021-06-19Merge branch 'master' into core-updates...Note: this merge actually changes the 'curl' and 'python-attrs' derivations, as part of solving caf4a7a2770ef4d05a6e18f40d602e51da749ddc and 12964df69a99de6190422c752fef65ef813f3b6b respectively. 4604d43c0e (gnu: gnutls@3.6.16: Fix cross-compilation.) was ignored because it cannot currently be tested. Conflicts: gnu/local.mk gnu/packages/aidc.scm gnu/packages/boost.scm gnu/packages/curl.scm gnu/packages/nettle.scm gnu/packages/networking.scm gnu/packages/python-xyz.scm gnu/packages/tls.scm Marius Bakke
2021-06-14gnu: Add snappy-with-clang6....* gnu/packages/compression.scm (snappy-with-clang6): New variable. Ricardo Wurmus
2021-06-14gnu: Rename qtbase to qtbase-5....This change was automated via the following command: $ git ls-files | xargs sed -i 's/,qtbase)/,qtbase-5)/g' $ git ls-files | xargs sed -i 's/inherit qtbase)/inherit qtbase-5)/g' $ git ls-files | xargs sed -i 's/package-version qtbase)/package-version qtbase-5)/g' $ git checkout etc # to clear some spurious changes This is done so the qtbase package can be upgraded to version 6 in the following commit. Maxim Cournoyer
2021-06-11gnu: squashfs-tools: Install some documentation....* gnu/packages/compression.scm (squashfs-tools)[arguments]: Add a new 'install-documentation phase. Remove an obsolete #t whilst here. Tobias Geerinckx-Rice
2021-06-11gnu: squashfs-tools: Support Zstandard compression....* gnu/packages/compression.scm (squashfs-tools)[arguments]: Add "ZSTD_SUPPORT=1" to #:make-flags. [inputs]: Add zstd:lib. Tobias Geerinckx-Rice
2021-06-11gnu: squashfs-tools: Build from upstream git....* gnu/packages/compression.scm (squashfs-tools)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice
2021-06-06Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/algebra.scm gnu/packages/bioinformatics.scm gnu/packages/curl.scm gnu/packages/docbook.scm gnu/packages/emacs-xyz.scm gnu/packages/maths.scm gnu/packages/plotutils.scm gnu/packages/python-web.scm gnu/packages/python-xyz.scm gnu/packages/radio.scm gnu/packages/readline.scm gnu/packages/tls.scm gnu/packages/xml.scm gnu/packages/xorg.scm Marius Bakke
2021-05-29gnu: libjcat: Update to 0.1.8....* gnu/packages/compression.scm (libjcat): Update to 0.1.8. Tobias Geerinckx-Rice
2021-05-23gnu: squashfs-tools: Prepare for GCC 10....* gnu/packages/compression.scm (squashfs-tools)[source](modules, snippet): New fields. Marius Bakke
2021-05-22Merge branch 'master' into core-updatesMarius Bakke
2021-05-22gnu: zstd: Update to 1.5.0....* gnu/packages/compression.scm (zstd): Update to 1.5.0. [arguments]: Remove obsolete phase. Marius Bakke
2021-05-22gnu: sharutils: 'which' is a native input....* gnu/packages/compression.scm (sharutils)[inputs]: Rename to ... [native-inputs]: ... this. Marius Bakke
2021-05-22gnu: sharutils: Prepare for GCC 10....* gnu/packages/compression.scm (sharutils)[source](snippet): Add substitution to avoid duplicate header definitions. [arguments]: Remove trailing #t. Marius Bakke
2021-05-15Merge branch 'master' into core-updatesLudovic Courtès
2021-05-13gnu: snappy: Update to 1.1.9....* gnu/packages/compression.scm (snappy): Update to 1.1.9. [source]: Add another patch. [arguments]: Add new #:configure-flags and an 'unpack-third_party-subprojects phase. [native-inputs]: Add the sources for benchmark and googletests. * gnu/packages/patches/snappy-add-inline-for-GCC.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2021-05-13gnu: libjcat: Update to 0.1.7....* gnu/packages/compression.scm (libjcat): Update to 0.1.7. Tobias Geerinckx-Rice
2021-05-09gnu: unzip: Incorporate grafted changes....* gnu/packages/compression.scm (unzip)[replacement]: Remove. [source](patches): Add patches from UNZIP/FIXED. (unzip/fixed): Remove variable. Marius Bakke
2021-04-22gnu: zstd: Adjust test suite for 32-bit architectures....* gnu/packages/compression.scm (zstd)[arguments]: Adjust 'fix-tests-32bit phase to work better on low RAM machines. Efraim Flashner
2021-04-16Merge remote-tracking branch 'origin/master' into core-updates... Conflicts: gnu/local.mk gnu/packages/boost.scm gnu/packages/chez.scm gnu/packages/compression.scm gnu/packages/crates-io.scm gnu/packages/docbook.scm gnu/packages/engineering.scm gnu/packages/gcc.scm gnu/packages/gl.scm gnu/packages/gtk.scm gnu/packages/nettle.scm gnu/packages/python-check.scm gnu/packages/python-xyz.scm gnu/packages/radio.scm gnu/packages/rust.scm gnu/packages/sqlite.scm guix/build-system/node.scm Efraim Flashner
2021-03-30gnu: zziplib/fixed: Add missing library symlinks....Fixes <https://bugs.gnu.org/47212>, <https://bugs.gnu.org/47448>, <https://bugs.gnu.org/47492>. * gnu/packages/compression.scm (zziplib/fixed)[arguments]: Add new phase to create missing library symlinks. Efraim Flashner
2021-03-30gnu: zstd: Downgrade to 1.4.4 and make security graft saner....* gnu/packages/patches/zstd-CVE-2021-24031_CVE-2021-24032.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/compression.scm (zstd-1.4.9): Remove. (zstd/fixed): New variable. Apply patch. (zstd)[replacement]: Graft with zstd/fixed. Léo Le Bouter
2021-03-30gnu: zstd: Fix tests on 32-bit architectures....* gnu/packages/compression.scm (zstd)[arguments]<#:phases>: Add 'fix-tests-32bit. Signed-off-by: Léo Le Bouter <lle-bout@zaclys.net> Simon Tournier
2021-03-27gnu: zstd: Fix unnecessary dependency upon $PATH....* gnu/packages/compression (zstd)[arguments]: Add a 'patch-command-file-names phase. Tobias Geerinckx-Rice
2021-03-26gnu: upx: Fix CVE-2021-20285....* gnu/packages/patches/upx-CVE-2021-20285.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/compression.scm (upx): Apply patch. Léo Le Bouter
2021-03-24Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2021-03-17gnu: pzstd: Update to 1.4.9 [fixes CVE-2021-24032]....* gnu/packages/compression.scm (pzstd): Use 'package/inherit' over zstd so any graft applied to zstd cascades onto pzstd which is built from the same source. Léo Le Bouter
2021-03-15gnu: unzip/fixed: Make private....* gnu/packages/compression.scm (unzip/fixed): Use define instead of define-public. Léo Le Bouter
2021-03-15gnu: gzstream: Add PIC flag....* gnu/packages/compression.scm (gzstream) [arguments]: Add phase 'use-pic. Lars-Dominik Braun
2021-03-14gun: unzip/fixed: Fix tests on 32-bit systems....* gnu/packages/patches/unzip-32bit-zipbomb-fix.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/compression.scm (unzip/fixed): Apply patch. Léo Le Bouter
2021-03-14gnu: unzip: Fix patch name....This is what happens when you push without testing your changes :/ * gnu/packages/compression.scm (unzip)[source]: Adjust patch name. Efraim Flashner
2021-03-14gnu: unzip: Add patches from Fedora [security fixes]....Non-exhaustively fixes CVE-2016-9844, CVE-2018-1000035, CVE-2018-18384, and CVE-2019-13232. * gnu/packages/patches/unzip-COVSCAN-fix-unterminated-string.patch, gnu/packages/patches/unzip-CVE-2016-9844.patch, gnu/packages/patches/unzip-CVE-2018-1000035.patch, gnu/packages/patches/unzip-CVE-2018-18384.patch, gnu/packages/patches/unzip-case-insensitive.patch, gnu/packages/patches/unzip-alt-iconv-utf8-print.patch, gnu/packages/patches/unzip-alt-iconv-utf8.patch, gnu/packages/patches/unzip-close.patch, gnu/packages/patches/unzip-exec-shield.patch, gnu/packages/patches/unzip-fix-recmatch.patch, gnu/packages/patches/unzip-manpage-fix.patch, gnu/packages/patches/unzip-overflow.patch, gnu/packages/patches/unzip-symlink.patch, gnu/packages/patches/unzip-timestamp.patch, gnu/packages/patches/unzip-valgrind.patch, gnu/packages/patches/unzip-x-option.patch, gnu/packages/patches/unzip-zipbomb-manpage.patch, gnu/packages/patches/unzip-zipbomb-part1.patch, gnu/packages/patches/unzip-zipbomb-part2.patch, gnu/packages/patches/unzip-zipbomb-part3.patch: New patches. * gnu/local.mk (dist_patch_DATA): Register them. * gnu/packages/compression.scm (unzip/fixed): New variable. Apply patches. (unzip)[replacement]: Graft. Léo Le Bouter
2021-03-13gnu: Remove bsdiff....As discussed in <https://lists.gnu.org/archive/html/guix-devel/2021-03/msg00154.html>, remove because of unpatched CVE-2020-14315 with no non-FreeBSD patch in sight. * gnu/packages/compression.scm (bsdiff): Remove. Léo Le Bouter
2021-03-11gnu: zstd-1.4.9: Fix i686-linux and arm/aarch64-linux builds....It's only a graft added for security so disabling tests on there seems acceptable. See: <https://lists.gnu.org/archive/html/guix-devel/2021-03/msg00130.html>. * gnu/packages/compression.scm (zstd-1.4.9)[arguments]: Substitute keyword arguments of 'zstd' to disable tests. Léo Le Bouter
2021-03-10gnu: zziplib: Update to 0.13.72 [security fixes]....Non-exhaustively, fixes CVE-2018-16548 and CVE-2018-17828. * gnu/packages/compression.scm (zziplib/fixed): New variable. (zziplib)[replacement]: Graft. Léo Le Bouter
2021-03-10gnu: bsdiff: Fix CVE-2014-9862....* gnu/packages/patches/bsdiff-CVE-2014-9862.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/compression.scm (bsdiff): Apply it. Léo Le Bouter
2021-03-09gnu: lrzip: Update to 0.641....* gnu/packages/compression.scm (lrzip): Update to 0.641. Tobias Geerinckx-Rice
2021-03-06gnu: zstd: Update to 1.4.9 [security fixes]....Fixes CVE-2021-24031 and CVE-2021-24032. * gnu/packages/compression.scm (zstd-1.4.9): New variable. * gnu/packages/compression.scm (zstd): Update to 1.4.9. [replacement]: Graft with 'zstd-1.4.9'. Léo Le Bouter
2021-03-06gnu: zstd: Update to 1.4.9....* gnu/packages/compression.scm (zstd): Update to 1.4.9. Léo Le Bouter
2021-03-06Merge branch 'master' into core-updatesChristopher Baines
2021-03-04gnu: pigz: Update to 2.6....* gnu/packages/compression.scm (pigz): Update to 2.6. Tobias Geerinckx-Rice
2021-03-04gnu: clzip: Update to 1.12....* gnu/packages/compression.scm (clzip): Update to 1.12. Tobias Geerinckx-Rice