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2021-07-29Merge branch 'master' into core-updates-frozen... Conflicts: gnu/packages/bioinformatics.scm gnu/packages/cmake.scm gnu/packages/curl.scm gnu/packages/emacs-xyz.scm gnu/packages/gpodder.scm gnu/packages/music.scm gnu/packages/patches/glibc-bootstrap-system.patch gnu/packages/python-xyz.scm gnu/packages/shells.scm gnu/packages/statistics.scm Marius Bakke
2021-07-29gnu: apache-arrow: Update to 5.0.0....* gnu/packages/databases.scm (apache-arrow): Update to 5.0.0. Ricardo Wurmus
2021-07-28gnu: python-pyarrow: Fix parquet support....Co-authored-by: Phil Beadling <phil@beadling.co.uk>. * gnu/packages/databases.scm (python-pyarrow)[arguments]: Add phases patch-cmake-variables, patch-parquet-library, and set-PYARROW_WITH_PARQUET. [propagated-inputs]: Add "include" output of apache-arrow package. Ricardo Wurmus
2021-07-20gnu: Add sequeler....* gnu/packages/databases.scm (sequeler): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Alexandre Hannud Abdo
2021-07-18Merge branch 'master' into core-updatesLudovic Courtès
2021-07-02gnu: perl-sql-splitstatement: Update to 1.00023....* gnu/packages/databases.scm (perl-sql-splitstatement): Update to 1.00023. [native-inputs]: Add perl-test-differences and perl-test-script. Tobias Geerinckx-Rice
2021-07-02gnu: perl-db-file: Update to 1.856....* gnu/packages/databases.scm (perl-db-file): Update to 1.856. Tobias Geerinckx-Rice
2021-06-30gnu: virtuoso-ose: Update to 7.2.6....* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.6. [source]: Get it from SourceForge. [inputs]: Use the default OpenSSL version. Tobias Geerinckx-Rice
2021-06-29gnu: python2-sqlparse: Remove package....* gnu/packages/databases.scm (python2-sqlparse): Remove variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> zimoun
2021-06-25gnu: mariadb-connector-c: Update to 3.1.13....* gnu/packages/databases.scm (mariadb-connector-c): Update to 3.1.13. Tobias Geerinckx-Rice
2021-06-23Merge branch 'master' into core-updates...Conflicts: gnu/packages/cups.scm gnu/packages/python-web.scm gnu/packages/web.scm guix/build/maven/pom.scm Tobias Geerinckx-Rice
2021-06-21gnu: apache-arrow: Update to 4.0.1....* gnu/packages/databases.scm (apache-arrow): Update to 4.0.1. [arguments]: Remove trailing boolean; ensure that xsimd is not downloaded and built anew. [inputs]: Add xsimd. Ricardo Wurmus
2021-06-19Merge branch 'master' into core-updates...Note: this merge actually changes the 'curl' and 'python-attrs' derivations, as part of solving caf4a7a2770ef4d05a6e18f40d602e51da749ddc and 12964df69a99de6190422c752fef65ef813f3b6b respectively. 4604d43c0e (gnu: gnutls@3.6.16: Fix cross-compilation.) was ignored because it cannot currently be tested. Conflicts: gnu/local.mk gnu/packages/aidc.scm gnu/packages/boost.scm gnu/packages/curl.scm gnu/packages/nettle.scm gnu/packages/networking.scm gnu/packages/python-xyz.scm gnu/packages/tls.scm Marius Bakke
2021-06-14gnu: Add nanodbc-for-irods....* gnu/packages/databases.scm (nanodbc-for-irods): New variable. Ricardo Wurmus
2021-06-13gnu: postgresql: Remove replacement....* gnu/packages/databases.scm (postgresql-13): Update to 13.3. [replacement]: Remove. (postgresql-13.3): Remove variable. Marius Bakke
2021-06-08gnu: python2-orator: Remove package....* gnu/packages/database.scm (python2-orator): Remove variable. (python-orator)[properties]: Remove field. Signed-off-by: Leo Famulari <leo@famulari.name> zimoun
2021-06-06Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/algebra.scm gnu/packages/bioinformatics.scm gnu/packages/curl.scm gnu/packages/docbook.scm gnu/packages/emacs-xyz.scm gnu/packages/maths.scm gnu/packages/plotutils.scm gnu/packages/python-web.scm gnu/packages/python-xyz.scm gnu/packages/radio.scm gnu/packages/readline.scm gnu/packages/tls.scm gnu/packages/xml.scm gnu/packages/xorg.scm Marius Bakke
2021-06-02gnu: redis: Update to 6.2.4 [security fixes]....Fixes CVE-2021-29477. * gnu/packages/databases.scm (redis): Update to 6.2.4. [arguments]: Disable the 'integration/failover' test. Signed-off-by: Leo Famulari <leo@famulari.name> Simon Streit
2021-05-23gnu: lmdb: Update to 0.9.29....* gnu/packages/databases.scm (lmdb): Update to 0.9.29. Tobias Geerinckx-Rice
2021-05-22Merge branch 'master' into core-updatesMarius Bakke
2021-05-19gnu: perl-dbd-pg: Update to 3.14.2....* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.14.2. Efraim Flashner
2021-05-17gnu: PostgreSQL 9: Update to 9.6.22 [fixes CVE-2021-{32027,32028,32029}]....* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.22. Leo Famulari
2021-05-17gnu: PostgreSQL 10: Update to 10.17 [fixes CVE-2021-{32027,32028,32029}]....* gnu/packages/databases.scm (postgresql-10): Update to 10.17. Leo Famulari
2021-05-17gnu: PostgreSQL 11: Update to 11.12 [fixes CVE-2021-{32027,32028,32029}]....* gnu/packages/databases.scm (postgresql-11): Update to 11.12. Leo Famulari
2021-05-17gnu: PostgreSQL: Update to 13.3 [fixes CVE-2021-{32027,32028,32029}]....* gnu/packages/databases.scm (postgresql-13)[replacement]: Use postgresql-13.3. (postgresql-13.2): Replace with ... (postgresql-13.3): ... new variable. Leo Famulari
2021-05-15Merge branch 'master' into core-updatesLudovic Courtès
2021-05-12gnu: Add python-sqlalchemy-stubs....* gnu/packages/databases.scm (python-sqlalchemy-stubs): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> BonfaceKilz
2021-05-09gnu: CMake: Update to 3.20.2....* gnu/packages/cmake.scm (%common-disabled-tests): Don't disable BootstrapTest. (cmake-bootstrap): Update to 3.20.2. [source](modules, snippet): Move from here ... (cmake-minimal)[source]: ... to here. * gnu/packages/patches/mariadb-cmake-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/databases.scm (mariadb)[source](patches): Add it. Marius Bakke
2021-05-09gnu: PostgreSQL: Remove replacement package....* gnu/packages/databases.scm (postgresql-13): Update to 13.2. [replacement]: Remove. (postgresql-13.2): Remove variable. Marius Bakke
2021-05-09gnu: MariaDB: Incorporate grafted changes....* gnu/packages/databases.scm (mariadb)[replacement]: Remove. [source](patches): New field. (mariadb/fixed): Remove variable. Marius Bakke
2021-05-09Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/bioinformatics.scm gnu/packages/django.scm gnu/packages/gtk.scm gnu/packages/llvm.scm gnu/packages/python-web.scm gnu/packages/python.scm gnu/packages/tex.scm guix/build-system/asdf.scm guix/build/emacs-build-system.scm guix/profiles.scm Marius Bakke
2021-05-05gnu: python-sqlparse: Remove unnecessary runtime dependencies....* gnu/packages/databases.scm (python-sqlparse)[arguments]: Override 'wrap' phase. Marius Bakke
2021-05-05gnu: python-sqlparse: Update to 0.4.1....* gnu/packages/databases.scm (python-sqlparse): Update to 0.4.1. Marius Bakke
2021-05-01gnu: soci: Update to 4.0.2....* gnu/packages/databases.scm (soci): Update to 4.0.2. Tobias Geerinckx-Rice
2021-04-26gnu: Add ruby-redis....* gnu/packages/databases.scm (ruby-redis): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Pjotr Prins
2021-04-23gnu: nanodbc: Build shared libraries....* gnu/packages/databases.scm (nanodbc)[arguments]: Build shared libraries. Ricardo Wurmus
2021-04-20gnu: Add nanodbc....* gnu/packages/databases.scm (nanodbc): New variable. Ricardo Wurmus
2021-04-19gnu: freetds: Update to 1.2.20....* gnu/packages/databases.scm (freetds): Update to 1.2.20. Tobias Geerinckx-Rice
2021-04-16Merge remote-tracking branch 'origin/master' into core-updates... Conflicts: gnu/local.mk gnu/packages/boost.scm gnu/packages/chez.scm gnu/packages/compression.scm gnu/packages/crates-io.scm gnu/packages/docbook.scm gnu/packages/engineering.scm gnu/packages/gcc.scm gnu/packages/gl.scm gnu/packages/gtk.scm gnu/packages/nettle.scm gnu/packages/python-check.scm gnu/packages/python-xyz.scm gnu/packages/radio.scm gnu/packages/rust.scm gnu/packages/sqlite.scm guix/build-system/node.scm Efraim Flashner
2021-04-11gnu: freetds: Update to 1.2.19....* gnu/packages/databases.scm (freetds): Update to 1.2.19. Tobias Geerinckx-Rice
2021-04-08gnu: Add galera....* gnu/packages/databases.scm (galera): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> methuselah-0
2021-04-06gnu: python-tortoise-orm: Fix dependencies....* gnu/packages/databases.scm (python-tortoise-orm) [propagated-inputs]: Add missing dependency. [arguments]: Relax pytz version requirement, remove iso8601 requirement. Lars-Dominik Braun
2021-03-27gnu: soci: Propagate inputs....* gnu/packages/databases.scm (soci)[inputs]: Move to... [propagated-inputs]: ... here. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Raghav Gururajan
2021-03-26gnu: mariadb: Fix CVE-2021-27928....* gnu/packages/patches/mariadb-CVE-2021-27928.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/databases.scm (mariadb/fixed): New variable. Apply patch. (mariadb)[replacement]: Graft. Léo Le Bouter
2021-03-24Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2021-03-23gnu: python2-rq: Remove package....* gnu/packages/databases.scm (python2-rq): Delete. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> zimoun
2021-03-16gnu: libmemcached: Disable test suite....* gnu/packages/databases.scm (libmemcached): Disable test suite. Removing trailing #t. [phases]{fix-configure}: Remove useless group in pattern. {disable-failing-tests}: Remove phase. {build-and-install-html-doc}: Order after the build phase. [home-page]: Please 'guix lint'. Reported-by: Simon Tournier <zimon.toutoune@gmail.com> Maxim Cournoyer
2021-03-16gnu: Remove MongoDB....mongodb 3.4.10 has unpatched CVEs and mongodb 3.4.24 has some files in the release tarball under the SSPL, therefore we cannot provide mongodb while upholding to good security standards. It turns out feff80cec3c97a3df2c20d300be12d67f79d4f22 was right since while the main license file wasnt altered to SSPL, some files in the tree contain SSPL headers. * gnu/packages/databases.scm (go-gopkg.in-mgo.v2): Remove. * gnu/packages/databases.scm (mongo-tools): Remove. * doc/guix.texi (mongodb-service-type): Remove. * gnu/tests/databases.scm (%test-mongodb, %mongodb-os, run-mongodb-test): Remove. * gnu/services/databases.scm (mongodb-configuration, mongodb-configuration?, mongodb-configuration-mongodb, mongodb-configuration-config-file, mongodb-configuration-data-directory, mongodb-service-type, %default-mongodb-configuration-file, %mongodb-accounts, mongodb-activation, mongodb-shepherd-service): Remove. * gnu/packages/databases.scm (mongodb): Remove. Léo Le Bouter
2021-03-11gnu: mongodb: Update comment about package license....* gnu/packages/databases.scm (mongodb): Adjust the comment about the licensing status of the package, there are still older branches receiving updates under the AGPL license. Efraim Flashner
2021-03-11Revert "Revert "gnu: mongodb: Update to 3.4.24 [security fixes].""...This reverts commit feff80cec3c97a3df2c20d300be12d67f79d4f22. I was mistaken, there are still branches of mongodb which are still licensed under the AGPL3 Efraim Flashner
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