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2019-07-11Merge branch 'staging'Marius Bakke
2019-07-10gnu: postgresql@9: Update to 9.6.14 [fixes CVE-2018-1058, CVE-2019-9193]Efraim Flashner
* gnu/packages/databases.scm (postgresql@9): Update to 9.6.14.
2019-07-10Merge branch 'master' into stagingMarius Bakke
2019-07-07gnu: Add python-crate.Pierre Langlois
* gnu/packages/databases.scm (python-crate): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-02gnu: postgresql@10: Update to 10.9.Marius Bakke
* gnu/packages/databases.scm (postgresql): Update to 10.9.
2019-06-25gnu: memcached: Update to 1.5.16.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (memcached): Update to 1.5.16.
2019-06-24gnu: Add postgresql-11.Gábor Boskovits
* gnu/packages/databases.scm(postgresql-11): New variable.
2019-06-22gnu: python-lmdb: Update to 0.95.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-lmdb): Update to 0.95.
2019-06-13gnu: perl-db-file: Update to 1.852.Alex Griffin
* gnu/packages/databases.scm (perl-db-file): Update to 1.852. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-11Merge branch 'master' into stagingMarius Bakke
2019-06-10gnu: recutils: Remove emacs-minimal native input.Jack Hill
* gnu/packages/databases.scm (recutils)[native-inputs]: Remove emacs-minimal. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-06-10gnu: Add emacs-recutils.Jack Hill
* gnu/packages/databases.scm (emacs-recutils): New variable. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-06-03Merge branch 'master' into stagingMarius Bakke
2019-05-27gnu: python-alembic: Update to 1.0.10.Danny Milosavljevic
* gnu/packages/databases.scm (python-alembic): Update to 1.0.10.
2019-05-24gnu: postgresql: Remove graft for 10.8.Marius Bakke
* gnu/packages/databases.scm (postgresql): Update to 10.8. [replacement]: Remove. (postgresql-10.8): Remove variable.
2019-05-24Merge branch 'master' into stagingMarius Bakke
2019-05-24gnu: Move Sphinx and friends to (gnu packages sphinx).Marius Bakke
* gnu/packages/python-xyz.scm (python-sphinxcontrib-websupport, python2-sphinxcontrib-websupport, python-sphinx, python2-sphinx, python-sphinx-gallery, python2-sphinx-gallery, python-sphinx-rtd-theme, python2-sphinx-rtd-theme, python-guzzle-sphinx-theme, python2-guzzle-sphinx-theme, python-sphinxcontrib-newsfeed, python-sphinxcontrib-programoutput, python2-sphinxcontrib-programoutput, python-sphinx-repoze-interface, python2-sphinx-repoze-interface, python-sphinx-cloud-sptheme, python2-sphinx-cloud-sptheme, python-sphinx-alabaster-theme, python2-sphinx-alabaster-theme, python-sphinx-me, python-sphinxcontrib-svg2pdfconverter): Move to ... (gnu): * gnu/packages/sphinx.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly. * gnu/packages/admin.scm, gnu/packages/bioinformatics.scm, gnu/packages/calendar.scm, gnu/packages/cluster.scm, gnu/packages/databases.scm, gnu/packages/dav.scm, gnu/packages/disk.scm, gnu/packages/django.scm, gnu/packages/elf.scm, gnu/packages/emacs-xyz.scm, gnu/packages/emulators.scm, gnu/packages/finance.scm, gnu/packages/image.scm, gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm, gnu/packages/openstack.scm, gnu/packages/pdf.scm, gnu/packages/python-web.scm, gnu/packages/search.scm, gnu/packages/statistics.scm, gnu/packages/storage.scm, gnu/packages/sync.scm, gnu/packages/terminals.scm, gnu/packages/tls.scm, gnu/packages/web.scm: Adjust module imports.
2019-05-24gnu: postgresql: Replace with 10.8 [security fixes].Marius Bakke
This fixes CVE-2019-10129 and CVE-2019-10130. * gnu/packages/databases.scm (postgresql)[replacement]: New field. (postgresql-10.8): New variable.
2019-05-22gnu: python-trollius-redis: Fix typo "asynchronous".Vagrant Cascadian
* gnu/packages/databases (python-trollius-redis)[description]: Fix typo.
2019-05-21gnu: memcached: Update to 1.5.14.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (memcached): Update to 1.5.14.
2019-05-13gnu: python-mysqlclient: Don't depend on MySQL.Marius Bakke
* gnu/packages/databases.scm (python-mysqlclient)[native-inputs]: Move MARIADB from here to ... [inputs]: ... here. Remove MYSQL.
2019-05-13gnu: perl-dbd-mysql: Depend on MariaDB rather than MySQL.Marius Bakke
* gnu/packages/databases.scm (perl-dbd-mysql)[propagated-inputs]: Change from MYSQL to MARIADB.
2019-05-13gnu: postgresql@9: Update to 9.6.13 [fixes CVE-2019-10129, CVE-2019-10130].Marius Bakke
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.13.
2019-05-09gnu: leveldb: Update to 1.22.Marius Bakke
* gnu/packages/databases.scm (leveldb): Update to 1.22.
2019-05-09gnu: Add python-pylibmc.Maxim Cournoyer
* gnu/packages/databases.scm (python-pylibmc, python2-pylibmc): New variables.
2019-05-09gnu: Add libmemcached.Maxim Cournoyer
* gnu/packages/databases.scm (libmemcached): New variable.
2019-05-08gnu: mariadb: Update to 10.1.40.Marius Bakke
* gnu/packages/databases.scm (mariadb): Update to 10.1.40.
2019-04-23Merge branch 'master' into stagingMarius Bakke
2019-04-22gnu: python-redis: Update to 3.2.1.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-redis): Update to 3.2.1.
2019-04-22gnu: python-sqlalchemy: Update to 1.3.3.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.3.
2019-04-22gnu: python-pyodbc: Update to 4.0.26.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.26.
2019-04-22gnu: memcached: Update to 1.5.13.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (memcached): Update to 1.5.13.
2019-04-17Merge branch 'master' into stagingMarius Bakke
2019-04-14gnu: Add sqitch.Christopher Baines
* gnu/packages/databases.scm (sqitch): New variable.
2019-04-14gnu: Add perl-mysql-config.Christopher Baines
* gnu/packages/databases.scm (perl-mysql-config): New variable.
2019-04-01Merge branch 'master' into stagingMarius Bakke
2019-03-31gnu: leveldb: Update to 1.21.Marius Bakke
* gnu/packages/databases.scm (leveldb): Update to 1.21. [build-system]: Change to CMAKE-BUILD-SYSTEM. [arguments]: Adjust accordingly.
2019-03-31gnu: leveldb: Don't use unstable tarball.Marius Bakke
* gnu/packages/databases.scm (leveldb)[source]: Use GIT-FETCH.
2019-03-31gnu: Fix descriptions to not use quotes.Efraim Flashner
* gnu/packages/admin.scm (wpa-supplicant-minimal, mingetty, di), * gnu/packages/audio.scm (fil-plugins), * gnu/packages/base.scm (make-ld-wrapper, make-glibc-locales), * gnu/packages/bioinformatics.scm (r-samtools), * gnu/packages/chez.scm (chez-mit), * gnu/packages/commencement.scm (make-gcc-toolchain), * gnu/packages/compression.scm (fastjar), * gnu/packages/cran.scm (r-maps, r-rcpp), * gnu/packages/databases.scm (sparql-query), * gnu/packages/dunst.scm (dunst), * gnu/packages/ftp.scm (ncftp), * gnu/packages/gl.scm (freeglut), * gnu/packages/haskell-check.scm (ghc-tasty-golden), * gnu/packages/haskell.scm (ghc-case-insensitive, ghc-text, ghc-haskell-src, ghc-syb, ghc-deepseq-generics, ghc-network-uri, ghc-rerebase, ghc-zlib), * gnu/packages/image.scm (jbig2dec), * gnu/packages/kde-frameworks.scm (kinit, karchive), * gnu/packages/linux.scm (wireless-tools, perf, module-init-tools, kbd), * gnu/packages/lirc.scm (lirc), * gnu/packages/lisp.scm (uglify-js), * gnu/packages/mate.scm (mate-netbook), * gnu/packages/microcom.scm (microcom), * gnu/packages/music.scm (bristol), * gnu/packages/networking.scm (perl-geo-ip), * gnu/packages/patchutils.scm (patches), * gnu/packages/perl-check.scm (perl-test-more-utf8), * gnu/packages/perl.scm (perl-log-report-optional, perl-file-which, perl-io-tty, perl-log-any, perl-digest-sha1, perl-class-load, perl-regexp-common, perl-module-pluggable, perl-class-modifier), * gnu/packages/python-xyz.scm (python-backports-abc, python-natsort), * gnu/packages/samba.scm (iniparser), * gnu/packages/search.scm (mlocate), * gnu/packages/spice.scm (spice), * gnu/packages/statistics.scm (r-dt, r-lubridate, r-estimability, r-commonmark, r-digest, r-viridislite, r-stringr), * gnu/packages/tex.scm (texlive-latex-changebar), * gnu/packages/version-control.scm (subversion), * gnu/packages/w3m.scm (w3m), * gnu/packages/web.scm (perl-http-parser, perl-plack-middleware-reverseproxy), * gnu/packages/xorg.scm (xkeyboard-config, mkfontdir, xcursor-theme, mkfontscale, xinit, font-alias)[description]: Use @code instead of quotes.
2019-03-23Merge branch 'master' into stagingMarius Bakke
2019-03-23gnu: tdb: Update to 1.4.0.Marius Bakke
* gnu/packages/databases.scm (tdb): Update to 1.4.0.
2019-03-21Merge branch 'master' into stagingMarius Bakke
2019-03-18gnu: python-pyarrow: Update to 0.10.0.Ricardo Wurmus
* gnu/packages/databases.scm (python-pyarrow): Update to 0.10.0. [arguments]: Delete "build" phase. [native-inputs]: Add python-pytest-runner.
2019-03-18gnu: apache-arrow: Update to 0.10.0.Ricardo Wurmus
* gnu/packages/databases.scm (apache-arrow): Update to 0.10.0. [inputs]: Replace jemalloc-4.5.0 with jemalloc.
2019-03-18Correct name and email address for ng0.ng0
* .mailmap, Makefile.am, doc/guix.de.texi, doc/guix.fr.texi, doc/guix.texi, etc/completion/fish/guix.fish, gnu/packages/accessibility.scm, gnu/packages/admin.scm, gnu/packages/audio.scm, gnu/packages/autotools.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/cinnamon.scm, gnu/packages/compression.scm, gnu/packages/crypto.scm, gnu/packages/databases.scm, gnu/packages/django.scm, gnu/packages/dns.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/emacs.scm, gnu/packages/enlightenment.scm, gnu/packages/erlang.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/forth.scm, gnu/packages/fvwm.scm, gnu/packages/games.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm, gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,gnu/packages/guile-xyz.scm, gnu/packages/haskell-check.scm, gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/language.scm, gnu/packages/libcanberra.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm, gnu/packages/lolcode.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/mc.scm, gnu/packages/messaging.scm, gnu/packages/music.scm, gnu/packages/ncurses.scm, gnu/packages/networking.scm, gnu/packages/nickle.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl-check.scm, gnu/packages/perl.scm, gnu/packages/python-compression.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/ssh.scm, gnu/packages/suckless.scm, gnu/packages/tbb.scm, gnu/packages/telephony.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/web.scm, gnu/packages/wm.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/services/certbot.scm, gnu/services/desktop.scm, gnu/services/version-control.scm, gnu/services/web.scm, guix/import/hackage.scm, guix/licenses.scm: Correct name and email address for ng0. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-03-14build-system/go: Build with a filesystem union of Go dependencies.Leo Famulari
This basically changes (guix build-system go) so that instead of looking up its dependencies in a list of directories in $GOPATH, all the Go dependencies are symlinked into a single directory. Fixes <https://bugs.gnu.org/33620>. * guix/build/go-build-system.scm (setup-go-environment): New variable. (setup-environment, install-source): Remove variables. (unpack): Unpack the source relative to $GOPATH. (install): Do not install the compiled objects in the 'pkg' directory. Install the source code in this phase, and only install the source of the package named by IMPORT-PATH. * doc/guix.texi (Build Systems): Adjust accordingly. * gnu/packages/docker.scm (docker): Import (guix build union) on the build side and adjust to build phase name changes in (guix build-system go). * gnu/packages/shellutils.scm (direnv): Likewise. * gnu/packages/databases.scm (mongo-tools)[arguments]: Set '#:install-source #f'. * gnu/packages/music.scm (demlo)[arguments]: Move the 'install-scripts' phase after the 'install' phase.
2019-03-14Merge branch 'master' into stagingMarius Bakke
2019-03-12gnu: python-sqlalchemy: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-sqlalchemy)[home-page]: Use HTTPS.
2019-03-12gnu: python-sqlalchemy: Update to 1.3.1.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.1.
2019-03-12gnu: python-sql: Update to 1.0.0.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-sql): Update to 1.0.0.