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2021-09-25gnu: Add python-xgboost.Vinicius Monego
* gnu/packages/machine-learning.scm (python-xgboost): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-25gnu: Add xgboost.Vinicius Monego
* gnu/packages/machine-learning.scm (xgboost): New variable. * gnu/packages/patches/xgboost-use-system-dmlc-core.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-25gnu: Add dmlc-core.Vinicius Monego
* gnu/packages/machine-learning.scm (dmlc-core): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-24gnu: python-pytorch: Unbundle NNPACK.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-pytorch)[source]: Delete "third_party/NNPACK". [inputs]: Add NNPACK. [propagated-inputs]: Remove PYTHON-PEACHPY. * gnu/packages/patches/python-pytorch-system-libraries.patch: Remove hunk modifying NNPACK; add hunk to allow the use of our own NNPACK.
2021-09-24gnu: Add NNPACK.Ludovic Courtès
* gnu/packages/machine-learning.scm (nnpack): New variable. * gnu/packages/patches/nnpack-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-08-30gnu: python-scikit-learn: Update to 0.24.2.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.24.2. [arguments]: Remove trailing #t.
2021-08-27gnu: Add python-hmmlearn.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-hmmlearn): New variable.
2021-08-04gnu: python-pytorch: Remove leftover comment.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Remove leftover comment.
2021-08-04gnu: Add python-pytorch.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-pytorch): New variable. * gnu/packages/patches/python-pytorch-runpath.patch, gnu/packages/patches/python-pytorch-system-libraries.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2021-08-04gnu: gemmlowp: Add "generic" variant.Ludovic Courtès
* gnu/packages/machine-learning.scm (gemmlowp): New variable, based on 'gemmlowp-for-tensorflow'. (gemmlowp-for-tensorflow): Rewrite to inherit from GEMMLOWP. [properties]: New field.
2021-08-04gnu: gloo: Honor #:tests? in 'check' phase.Ludovic Courtès
* gnu/packages/machine-learning.scm (gloo)[arguments]: In 'check' phase, honor #:tests?.
2021-08-04gnu: gloo: Update to c22a5cf.Ludovic Courtès
* gnu/packages/machine-learning.scm (gloo): Update to c22a5cf. [inputs]: New field.
2021-08-04gnu: Add tensorflow-lite.Ricardo Wurmus
* gnu/packages/machine-learning.scm (tensorflow-lite): New variable.
2021-08-02gnu: Add onnx-optimizer.Ludovic Courtès
* gnu/packages/machine-learning.scm (onnx-optimizer): New variable. * gnu/packages/patches/onnx-optimizer-system-library.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-31gnu: onnx: Change source to 'git-fetch'.Ludovic Courtès
* gnu/packages/machine-learning.scm (onnx)[source]: Change to 'git-fetch'. Add "onnx-skip-model-downloads.patch". [arguments]: Add 'make-test-directory-writable' phase. * gnu/packages/patches/onnx-skip-model-downloads.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-31gnu: python-onnx: Rename to "onnx".Ludovic Courtès
* gnu/packages/machine-learning.scm (python-onnx): Rename to... (onnx): ... this, and change 'name' field accordingly. (python-onnx): New variable. * gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to... * gnu/packages/patches/onnx-shared-libraries.patch: ... this. * gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename to... * gnu/packages/patches/onnx-use-system-googletest.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-31gnu: python-onnx: Install libonnx.so and libonnx_proto.so.Ludovic Courtès
* gnu/packages/patches/python-onnx-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/machine-learning.scm (python-onnx)[source]: Use it. [arguments]: New field.
2021-07-31gnu: python-onnx: Delete bundled software.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-onnx)[source]: Delete the 'third_party' directory.
2021-07-31gnu: python-onnx: Move comment to the patch header.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to... * gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
2021-07-31gnu: python-onnx: Update to 1.9.0.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.9.0.
2021-07-29gnu: Add XNNPACK.Ludovic Courtès
* gnu/packages/machine-learning.scm (xnnpack): New variable. * gnu/packages/patches/xnnpack-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-25gnu: Add python-hyperopt.Vinicius Monego
* gnu/packages/machine-learning.scm (python-hyperopt): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-08gnu: Add python-cmaes.Vinicius Monego
* gnu/packages/machine-learning.scm (python-cmaes): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-04-25gnu: python-opentsne: Update to 0.5.2.Vinicius Monego
* gnu/packages/machine-learning.scm (python-opentsne): Update to 0.5.2. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-25gnu: python-pynndescent: Update to 0.5.2.Vinicius Monego
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.2. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-02-21gnu: python-onnx: Update to 1.8.1.Vinicius Monego
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.8.1. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-02-19gnu: python-scikit-learn: Update to 0.24.1.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.24.1. [propagated-inputs]: Add python-threadpoolctl. (python2-scikit-learn)[inputs,native-inputs,propagated-inputs]: Do not inherit these fields.
2021-01-31gnu: Add python-threadpoolctl.Efraim Flashner
* gnu/packages/machine-learning.scm (python-threadpoolctl): New variable.
2021-01-27gnu: python-xyz: Move a few modules to (gnu packages python-build).Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-pep517): Inherit from python-pep517-bootstrap. Remove the inherited common fields. (python-poetry-core, python-wheel) (python-toml): Move to ... * gnu/packages/python-build.scm: ... here, a new module. (python-pep517-bootstrap): New package. * gnu/local.mk (GNU_SYSTEM_MODULES): Register the new module.
2020-12-12gnu: python-onnx: Update to 1.8.0.Vinicius Monego
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.8.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-11-25gnu: Add python-opentsne.Vinicius Monego
* gnu/packages/machine-learning.scm (python-opentsne): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-11-25gnu: Add python-pynndescent.Vinicius Monego
* gnu/packages/machine-learning.scm (python-pynndescent): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-10-05gnu: python-keras: Fix build.Maxim Cournoyer
Fixes <https://issues.guix.gnu.org/39562>. * gnu/packages/machine-learning.scm (python-keras)[phases]{check}: Apply upstream fix to test_topology.py. Skip the failing test_selu test. Reported-by: Pierre Neidhardt <mail@ambrevar.xyz>
2020-10-02gnu: ocaml-mcl: Fix build.Maxim Cournoyer
It was failing on a /bin/sh occurrence patched twice in the configure script: sh: ./configure:/gnu/store/...-bash-minimal-5.0.16/gnu/store/...-bash-minimal-5.0.1:bad interpreter: No such file or directory * gnu/packages/machine-learning.scm (ocaml-mcl)[phases]{patch-paths}: Do not patch the configure script.
2020-09-11gnu: r-adaptivesparsity: Move to (gnu packages cran).zimoun
* gnu/packages/machine-learning.scm (r-adaptivesparsity): Move from here... * gnu/packages/cran.scm (r-adaptivesparsity): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-08-30gnu: vowpal-wabbit: Install more headers.Efraim Flashner
* gnu/packages/machine-learning.scm (vowpal-wabbit)[arguments]: Add 'install-more-headers phase to install more headers.
2020-08-13gnu: dlib: Install shared library.Efraim Flashner
Reported by Hamzeh Nasajpour <h.nasajpour@pantherx.org>. * gnu/packages/machine-learning.scm (dlib)[arguments]: Add configure-flag to build shared library. Remove custom 'delete-static-library phase.
2020-08-11gnu: openfst: Update to 1.7.9.Tobias Geerinckx-Rice
* gnu/packages/machine-learning.scm (openfst): Update to 1.7.9.
2020-08-03gnu: Add python-onnx.Vinicius Monego
* gnu/packages/machine-learning.scm (python-onnx): New variable. * gnu/packages/patches/python-onnx-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-07-12gnu: Remove ".git" from "https://github/…/….git".Ludovic Courtès
Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix swh) would sometimes return #f for these because the ".git" URLs are redirects to the non-".git" URLs. Consequently, 'guix lint -c archival' would keep saying "scheduled Software Heritage archival"; likewise, the fallback download code would fail. * gnu/packages/ada.scm, gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm, gnu/packages/android.scm, gnu/packages/animation.scm, gnu/packages/arcan.scm, gnu/packages/assembly.scm, gnu/packages/audio.scm, gnu/packages/authentication.scm, gnu/packages/avr.scm, gnu/packages/axoloti.scm, gnu/packages/backup.scm, gnu/packages/bash.scm, gnu/packages/benchmark.scm, gnu/packages/bioconductor.scm, gnu/packages/bioinformatics.scm, gnu/packages/bittorrent.scm, gnu/packages/boost.scm, gnu/packages/build-tools.scm, gnu/packages/c.scm, gnu/packages/calendar.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/chemistry.scm, gnu/packages/chez.scm, gnu/packages/clojure.scm, gnu/packages/code.scm, gnu/packages/compression.scm, gnu/packages/compton.scm, gnu/packages/coq.scm, gnu/packages/cpp.scm, gnu/packages/cran.scm, gnu/packages/crypto.scm, gnu/packages/curl.scm, gnu/packages/databases.scm, gnu/packages/datastructures.scm, gnu/packages/debug.scm, gnu/packages/disk.scm, gnu/packages/distributed.scm, gnu/packages/django.scm, gnu/packages/dlang.scm, gnu/packages/dns.scm, gnu/packages/docker.scm, gnu/packages/education.scm, gnu/packages/efi.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/embedded.scm, gnu/packages/emulators.scm, gnu/packages/engineering.scm, gnu/packages/erlang.scm, gnu/packages/fabric-management.scm, gnu/packages/file-systems.scm, gnu/packages/finance.scm, gnu/packages/firmware.scm, gnu/packages/flashing-tools.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/fpga.scm, gnu/packages/game-development.scm, gnu/packages/games.scm, gnu/packages/genealogy.scm, gnu/packages/genimage.scm, gnu/packages/geo.scm, gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/gnome-xyz.scm, gnu/packages/gnome.scm, gnu/packages/gnuzilla.scm, gnu/packages/golang.scm, gnu/packages/gpodder.scm, gnu/packages/graph.scm, gnu/packages/graphics.scm, gnu/packages/graphviz.scm, gnu/packages/groff.scm, gnu/packages/groovy.scm, gnu/packages/gtk.scm, gnu/packages/guile-xyz.scm, gnu/packages/guile.scm, gnu/packages/hardware.scm, gnu/packages/haskell-apps.scm, gnu/packages/haskell-xyz.scm, gnu/packages/hexedit.scm, gnu/packages/i2p.scm, gnu/packages/ibus.scm, gnu/packages/image-processing.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/ipfs.scm, gnu/packages/java-graphics.scm, gnu/packages/java-maths.scm, gnu/packages/java.scm, gnu/packages/javascript.scm, gnu/packages/jrnl.scm, gnu/packages/julia.scm, gnu/packages/jupyter.scm, gnu/packages/kodi.scm, gnu/packages/language.scm, gnu/packages/lego.scm, gnu/packages/less.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm, gnu/packages/lirc.scm, gnu/packages/lisp-xyz.scm, gnu/packages/llvm.scm, gnu/packages/logging.scm, gnu/packages/lolcode.scm, gnu/packages/lua.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/machine-learning.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/maths.scm, gnu/packages/maven.scm, gnu/packages/mes.scm, gnu/packages/messaging.scm, gnu/packages/monitoring.scm, gnu/packages/mpd.scm, gnu/packages/music.scm, gnu/packages/networking.scm, gnu/packages/node-xyz.scm, gnu/packages/ocaml.scm, gnu/packages/ocr.scm, gnu/packages/onc-rpc.scm, gnu/packages/opencl.scm, gnu/packages/opencog.scm, gnu/packages/pantheon.scm, gnu/packages/password-utils.scm, gnu/packages/patchutils.scm, gnu/packages/pdf.scm, gnu/packages/perl6.scm, gnu/packages/phabricator.scm, gnu/packages/popt.scm, gnu/packages/printers.scm, gnu/packages/prolog.scm, gnu/packages/protobuf.scm, gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/qt.scm, gnu/packages/radio.scm, gnu/packages/rails.scm, gnu/packages/rdf.scm, gnu/packages/rednotebook.scm, gnu/packages/rpc.scm, gnu/packages/rsync.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/screen.scm, gnu/packages/security-token.scm, gnu/packages/selinux.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/shellutils.scm, gnu/packages/simh.scm, gnu/packages/sml.scm, gnu/packages/ssh.scm, gnu/packages/statistics.scm, gnu/packages/stenography.scm, gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/synergy.scm, gnu/packages/telephony.scm, gnu/packages/terminals.scm, gnu/packages/tex.scm, gnu/packages/texinfo.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tmux.scm, gnu/packages/tor.scm, gnu/packages/toys.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/virtualization.scm, gnu/packages/vlang.scm, gnu/packages/vnc.scm, gnu/packages/vpn.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm, gnu/packages/wireservice.scm, gnu/packages/wm.scm, gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
2020-07-01gnu: Move some lisp libraries.Guillaume Le Vaillant
Move the 3 lisp libraries that are not in lisp-xyz.scm with the others. * gnu/packages/machine-learning.scm (sbcl-cl-libsvm-format, cl-libsvm-format, ecl-cl-libsvm-format, sbcl-cl-online-learning, cl-online-learning, ecl-cl-online-learning, sbcl-cl-random-forest, cl-random-forest, ecl-cl-random-forest): Move to ... * gnu/packages/lisp-xyz.scm (sbcl-cl-libsvm-format, cl-libsvm-format, ecl-cl-libsvm-format, sbcl-cl-online-learning, cl-online-learning, ecl-cl-online-learning, sbcl-cl-random-forest, cl-random-forest, ecl-cl-random-forest): ... here.
2020-06-23gnu: lightgbm: Don't use unstable tarball.Efraim Flashner
* gnu/packages/machine-learning.scm (lightgbm)[source]: Download using git-fetch. [arguments]: Adjust custom 'check phase accordingly.
2020-06-16gnu: python-ipython: Use python-prompt-toolkit-2.Ricardo Wurmus
This prevents conflicting variants of python-prompt-toolkit from being installed, which prevented jupyter from being installed. * gnu/packages/python-xyz.scm (python-ipython)[propagated-inputs]: Replace python-prompt-toolkit with python-prompt-toolkit-2. (python-widgetsnbextension)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel. (python-ipywidgets)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython. (python-jupyter-console)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel. (prompt-toolkit-2-instead-of-prompt-toolkit): Remove variable. * gnu/packages/machine-learning.scm (python-iml)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython.
2020-06-10gnu: dlib: Update to 19.20.Tobias Geerinckx-Rice
* gnu/packages/machine-learning.scm (dlib): Update to 19.20.
2020-06-07gnu: sbcl-cl-random-forest: Remove obsolete fix.Guillaume Le Vaillant
* gnu/packages/machine-learning.scm (sbcl-cl-random-forest)[arguments]: Remove 'add-sb-cltl2-dependency' phase.
2020-05-30gnu: python-prompt-toolkit: Update to 3.0.5.Edouard Klein
* gnu/packages/machine-learning.scm (python-iml)[propagated-inputs]: Pin implicit python-prompt-toolkit dependency to version 2. * gnu/packages/python-xyz.scm (python-widgetsnbextension)[propagated-inputs]: Pin implicit python-prompt-toolkit dependency to version 2. (python-ipywidgets)[propagated-inputs]: Pin implicit python-prompt-toolkit dependency to version 2. (python-jupyter-console)[propagated-inputs]: Pin explicit python-prompt-toolkit dependency to version 2. (python-prompt-toolkit): Update to version 3.0.5. [propagated-inputs]: Remove PYTHON-SIX and PYTHON-PYGMENTS. [home-page]: Adjust to current. (python-prompt-toolkit-2): New variable. (prompt-toolkit-2-instead-of-prompt-toolkit): New variable. (python2-prompt-toolkit): Keep at version 2. (python-prompt-toolkit-1): Inherit from version 2. Signed-off-by: Marius Bakke <marius@gnu.org>
2020-05-30gnu: python-iml: Move nose from propagated to native input.Edouard Klein
* gnu/packages/machine-learning.scm (python-iml)[propagated-inputs]: Move PYTHON-NOSE ... [native-inputs]: ... here. Signed-off-by: Marius Bakke <marius@gnu.org>
2020-05-26gnu: python-iml: Use HTTPS home page.Edouard Klein
* gnu/packages/machine-learning.scm (python-iml)[home-page]: s/http/https/ Signed-off-by: Marius Bakke <marius@gnu.org>
2020-05-25gnu: tensorflow: Fix build with python-3.8.Efraim Flashner
* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Also import python-version from python-build-system. Adjust 'python3.7-compatibility to also add python-3.8 compatibility. Adjust 'install-python to not hardcode the python version.
2020-04-30Merge branch 'master' into core-updatesMarius Bakke
Conflicts: gnu/local.mk gnu/packages/backup.scm gnu/packages/emacs-xyz.scm gnu/packages/guile.scm gnu/packages/lisp.scm gnu/packages/openldap.scm gnu/packages/package-management.scm gnu/packages/web.scm gnu/packages/xorg.scm
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