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2021-09-21gnu: ntfs-3g: Update to 2021.8.22 [security fixes].Leo Famulari
The upstream security advisory is named NTFS3G-SA-2021-0001. Fixes CVE-2021-33285, CVE-2021-35269, CVE-2021-35268, CVE-2021-33289, CVE-2021-33286, CVE-2021-35266, CVE-2021-33287, CVE-2021-35267, CVE-2021-39251, CVE-2021-39252, CVE-2021-39253, CVE-2021-39254, CVE-2021-39255, CVE-2021-39256, CVE-2021-39257, CVE-2021-39258, CVE-2021-39259, CVE-2021-39260, CVE-2021-39261, CVE-2021-39262, CVE-2021-39263. For more information: https://seclists.org/oss-sec/2021/q3/139 * gnu/packages/linux.scm (ntfs-3g): Update to 2021.8.22. [source]: Remove obsolete patch. * gnu/packages/patches/ntfs-3g-CVE-2019-9755.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-09-10gnu: racket: fix `raco exe` with non-minimal RacketPhilip McGrath
This commit backports an upstream repair for a bug exposed by Guix's change in Racket 8.2 to make the `racket` package a layered/tethered installation that chains to the `racket-minimal` package. When using a layered/tethered installation, the `setup/variant` library would fail to recognize the default Racet variant (CS, 3M, or CGC), leading to confusing failures from `raco exe`, `create-embedding-executable`, and other clients. For further details, see <https://issues.guix.gnu.org/50118> and <https://github.com/racket/racket/issues/3969>. * gnu/packages/patches/racket-minimal-backport-1629887.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/racket.scm (racket-minimal)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-09gnu: go-github-com-urfave-cli-v2: Fix tests when building with Go 1.17.Sarah Morgensen
* gnu/packages/patches/go-github-com-urfave-cli-v2-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/golang.scm (go-github-com-urfave-cli-v2)[origin]: Apply it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-09gnu: go-github-com-urfave-cli: Fix tests when building with Go 1.17.Sarah Morgensen
* gnu/packages/patches/go-github-com-urfave-cli-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/golang.scm (go-github-com-urfave-cli)[origin]: Apply it. Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-09gnu: mailutils: Update to 3.13.Maxim Cournoyer
* gnu/packages/patches/mailutils-fix-uninitialized-variable.patch: Remove patch. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/mail.scm (mailutils): Update to 3.13. Remove the 2013 --with-sql option TODO comment; if someone needs that, they can send a patch. [source]: Remove above patch. [phases]{prepare-test-suite}: Also patch shell shebang in 'libmailutils/tests/lock.at' and 'imap4d/tests/testclient.c'. [parallel-tests?]: Reinstate parallel tests. [inputs]: Move m4 to... [native-inputs]: ... here. Add the autoconf, automake, gettext and libtool quartet.
2021-09-06gnu: ocaml-ppx-variants-conv: Patch for building with ocaml-ppxlib.Xinglu Chen
The patch will make it build when building it with ocaml-ppxlib@0.23.0. * gnu/packages/patches/ocaml-ppx-variants-ppxlib-api-change.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/ocaml.scm (ocaml-ppx-variants-conv): Apply the patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-05gnu: u-boot-nintendo-nes-classic-edition: Make it actually boot again.Danny Milosavljevic
* gnu/packages/patches/u-boot-nintendo-nes-serial.patch: New file. * gnu/local.mk (dist_patch_DATA): Add u-boot-nintendo-nes-serial.patch. * gnu/packages/bootloaders.scm (u-boot-nintendo-nes-classic-edition): Downgrade to 2018.11. [source]: Add patch. [description]: Modify. [native-inputs]: Add python-2.
2021-09-04gnu: beets: Update to 1.5.0.Lars-Dominik Braun
* gnu/packages/music.scm (beets) [version]: Update to 1.5.0. [#:phases]: Keep testcase, switch to pytest and respect tests?. [native-inputs]: Move plugin dependencies… [inputs]: …here. * gnu/packages/music.scm (beets-next): Mark as deprecated. * gnu/packages/patches/beets-werkzeug-compat.patch: Delete patch. * gnu/local.mk: Deregister it.
2021-09-04gnu: python-mediafile: Update to 0.7.0.Simon Streit
Remove patch. It is now included in upstream release. * gnu/packages/music.scm (python-mediafile): Update to 0.7.0. * gnu/packages/patches/python-mediafile-wavpack.patch: Delete patch. * gnu/local.mk: Deregister it.
2021-09-01gnu: mailutils: Look up Scheme variables in the right module.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/49295>. Reported by Maxime Devos <maximedevos@telenet.be>. * gnu/packages/patches/mailutils-variable-lookup.patch: New file. * gnu/packages/mail.scm (mailutils)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2021-08-29gnu: python-pytest-asyncio: Enable tests and patch for Python 3.8.Maxim Cournoyer
* gnu/packages/patches/python-pytest-asyncio-python-3.8.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/check.scm (python-pytest-asyncio) [source]: Fetch from git and apply above patch. [phases]: Override the check phase, enabling tests.
2021-08-29gnu: python-execnet: Update to 1.9.0 and enable tests.Maxim Cournoyer
* gnu/packages/patches/python-execnet-read-only-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/python-xyz.scm (python-execnet): Update to 1.9.0. [source]: Fix indentation. [arguments]: Enable tests, replacing the default check phase.
2021-08-20gnu: minetest: Search for mods in MINETEST_MOD_PATH.Maxime Devos
* gnu/packages/patches/minetest-add-MINETEST_MOD_PATH.patch: New file. * gnu/packages/games.scm (minetest)[source]{patches}: Add it. (minetest)[native-search-paths]: Add "MINETEST_MOD_PATH". * gnu/local.mk (dist_patch_DATA): Add the patch. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-08-18gnu: Add python-pyan3.Arun Isaac
* gnu/packages/python-xyz.scm (python-pyan3): New variable. * gnu/packages/patches/python-pyan3-fix-absolute-path-bug.patch, gnu/packages/patches/python-pyan3-fix-positional-arguments.patch: New files. * gnu/local.mk: Register them.
2021-07-27gnu: adb: Make compatible with OpenSSL 1.1.Giovanni Biscuolo
OpenSSL version 1.1 brought some API changes which broke the build here, fix that by accessing rsa->n (and e) directly, using RSA_get0_key instead. * gnu/packages/patches/adb-libssl_11-compatibility.patch: New file * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/android.scm (android-platform-system-core)[origin]: Use it. (adb)[inputs]: Replace openssl-1.0 with openssl.
2021-08-11gnu: rapidjson: Adjust for GCC 10.Marius Bakke
* gnu/packages/patches/rapidjson-gcc-compat.patch: Add additional patch.
2021-08-11gnu: rocm-opencl-runtime: Shorten patch file name.Ludovic Courtès
This appeases 'guix lint -c patch-file-names'. * gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch: Rename to... * gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch: ... this. * gnu/packages/rocm.scm (rocm-opencl-runtime)[source]: Adjust accordingly. * gnu/local.mk (dist_patch_DATA): Likewise.
2021-08-08gnu: Add rocm-opencl-runtime.Lars-Dominik Braun
* gnu/packages/rocm.scm (rocm-opencl-runtime): New variable. * gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2021-08-08gnu: Add rocm-comgr.Lars-Dominik Braun
* gnu/packages/rocm.scm (rocm-comgr): New variable. * gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-08-08gnu: Add llvm-for-rocm.Lars-Dominik Braun
* gnu/packages/rocm.scm (llvm-for-rocm): New variable. * gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch, gnu/packages/patches/llvm-roc-4.0.0-remove-isystem-usr-include.patch, gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2021-08-05gnu: restic: Patch tests for go-1.16.Sarah Morgensen
* gnu/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/backup.scm (restic): Use it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-08-05gnu: pypy3: Update to 7.3.5.Maxim Cournoyer
The patch disabling tests is removed because it only fixes 2 out of 43 test failures. * gnu/packages/patches/pypy3-7.3.1-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/python.scm (pypy3): Update to 7.3.5. [patches]: Remove patch.
2021-08-05gnu: Rename u-boot-sifive-fu540 to sifive-unleashed.Pierre Langlois
* gnu/packages/bootloaders.scm (u-boot-sifive-fu540): Rename to ... (u-boot-sifive-unleashed): ... this. Change board name from sifive_fu540 to sifive_unleashed. * gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Rename sifive_fu540 to sifive_unleashed.
2021-08-04gnu: Add python-pytorch.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-pytorch): New variable. * gnu/packages/patches/python-pytorch-runpath.patch, gnu/packages/patches/python-pytorch-system-libraries.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2021-08-04gnu: Add instead.Dmitry Polyakov
* gnu/packages/game-development.scm (instead): New variable. * gnu/packages/patches/instead-use-games-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it here.
2021-08-04gnu: samba: Update to 4.13.10.Efraim Flashner
* gnu/packages/samba.scm (samba): Update to 4.13.10. [source]: Remove patch. * gnu/packages/patches/samba-fix-fcntl-hint-detection.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2021-08-02gnu: Add onnx-optimizer.Ludovic Courtès
* gnu/packages/machine-learning.scm (onnx-optimizer): New variable. * gnu/packages/patches/onnx-optimizer-system-library.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-08-02gnu: u-boot: Update to 2021.07.Pierre Langlois
* gnu/packages/patches/u-boot-sifive-prevent-reloc-initrd-fdt.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bootloaders.scm (%u-boot-sifive-prevent-relocating-initrd-fdt): New variable. (u-boot): Update to 2021.07. [native-inputs]: Add python-pycryptodomex. (u-boot-2021.07): Delete variable. (u-boot-tools)[arguments]: Adapt 'patch phase, disable failing test_spl test. (u-boot-sifive-unmatched): Use default u-boot package. (u-boot-pinebook-pro-rk3328): Use default u-boot package.
2021-07-31gnu: racket-minimal: Bootstrap from C.Philip McGrath
This commit bootstraps the Racket compiler and runtime system from source, including Racket CS as well as both variants of Racket BC. (One remaining limitation is discussed in comments added to gnu/packages/racket.scm.) In the process, it moves to building minimal Racket from the Git repository, rather than the packaged source tarballs. The Git repository is slightly better as the ``corresponding source'': 1. A few packages especially closely tied to the Racket core implementation (like "compiler-lib", "base", and "racket-doc") are developed in the same Git repository. Having them use the same Guix origin, too, will help to keep them in sync. 2. The top-level Makefile in the Git repository is an important ``script[] used to control compilation and installation.'' In particular, it cooperates with the "distro-build" package to create the source tarballs and installers for a Racket distribution. (Racket supports a notion of custom distributions.) 3. It is ``the preferred form ... for making modifications'' to the core Racket implementation. Racket releases are tagged in the Git repository (e.g. "v8.1"). At the beginning of each release cycle, a branch is created to stabilizer a version for extra testing. Active development happens on the "master" branch. * gnu/packages/racket-minimal-sh-via-rktio.patch: Adjust for extra directory layer. * gnu/local/racket.scm (cfg-flag:sh-for-rktio, cfg-flag:enable-lt, cfg-flag:enable-racket, unpack-nanopass+stex, %main-repo-main-distribution-pkgs): New private variables. * gnu/local/racket.scm (racket-minimal)[source]: Use Git. [source](snippet): Unbundle nanopass, stex, and libffi. [native-inputs]: Use racket-bootstrap-chez-bootfiles, plus its dependencies (for Chez, plus a Racket for bootstrap pig). [arguments]: Revise extensively. * gnu/local/racket.scm (racket-minimal-bc-3m, racket-minimal-bc-cgc): New packages, hidden at least for now. (racket-bootstrap-chez-bootfiles): Another new package, but this one is especially likely to stay hidden. * gnu/local/racket.scm (racket)[origin](snippet): Unbundle packages developed in the main Git repository, but leave their links.rktd and pkgs.rktd entries in place. [native-inputs]: Add the main Racket Git repository. [arguments](#:phases): Adjust 'unpack-packages to also unpack package sources from the main Racket Git repository. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31gnu: racket: Unbundle racket-minimal.Philip McGrath
This change takes advantage of improved support for layered and tethered installations in Racket 8.2. * gnu/packages/racket.scm (extend-layer): New private variable. This is a script for configuring a new config-tethered layer chaining to an existing Racket installation. * gnu/packages/racket.scm (racket)[source](snippet): Unbundle `racket-minimal`. [inputs]: Remove inputs that properly belong to `racket-minimal`. [native-inputs]: Add `racket-minimal` and `extend-layer`. [arguments]: Stop inheriting from `racket-minimal`. Add phase 'unpack-packages to move the sources and links file into place. Replace 'configure phase using `extend-layer`. Replace 'build phase using `raco setup`. Delete 'install phase. * gnu/packages/patches/racket-sh-via-rktio.patch: Rename to ... * gnu/packages/patches/racket-minimal-sh-via-rktio.patch: ... this file to placate `guix lint`. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/racket.scm (racket-minimal)[source]: Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31gnu: onnx: Change source to 'git-fetch'.Ludovic Courtès
* gnu/packages/machine-learning.scm (onnx)[source]: Change to 'git-fetch'. Add "onnx-skip-model-downloads.patch". [arguments]: Add 'make-test-directory-writable' phase. * gnu/packages/patches/onnx-skip-model-downloads.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-31gnu: python-onnx: Rename to "onnx".Ludovic Courtès
* gnu/packages/machine-learning.scm (python-onnx): Rename to... (onnx): ... this, and change 'name' field accordingly. (python-onnx): New variable. * gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to... * gnu/packages/patches/onnx-shared-libraries.patch: ... this. * gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename to... * gnu/packages/patches/onnx-use-system-googletest.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-31gnu: python-onnx: Install libonnx.so and libonnx_proto.so.Ludovic Courtès
* gnu/packages/patches/python-onnx-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/machine-learning.scm (python-onnx)[source]: Use it. [arguments]: New field.
2021-07-31gnu: python-onnx: Move comment to the patch header.Ludovic Courtès
* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to... * gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
2021-07-29gnu: Add XNNPACK.Ludovic Courtès
* gnu/packages/machine-learning.scm (xnnpack): New variable. * gnu/packages/patches/xnnpack-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29gnu: Add FP16.Ludovic Courtès
* gnu/packages/patches/fp16-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/maths.scm (fp16): New variable.
2021-07-29gnu: Add cpuinfo.Ludovic Courtès
* gnu/packages/parallel.scm (cpuinfo): New variable. * gnu/packages/patches/cpuinfo-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29gnu: Add pthreadpool.Ludovic Courtès
* gnu/packages/parallel.scm (pthreadpool): New variable. * gnu/packages/patches/pthreadpool-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29gnu: Add FXDiv.Ludovic Courtès
* gnu/packages/maths.scm (fxdiv): New variable. * gnu/packages/patches/fxdiv-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29gnu: julia-tracker: Patch for julia-1.6.Efraim Flashner
* gnu/packages/julia-xyz.scm (julia-tracker)[source]: Add patch. * gnu/packages/patches/julia-tracker-16-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2021-07-28gnu: glibc-for-bootstrap: Update patch.Franz Josef
There was/is something funny going on with the bootstrap glibc. The symbol for posix_spawnp points to getopt_r. Which in turn leads to a lot of crashed in tests later on. I extended the glibc-bootstrap patch to work around this bug. * gnu/packages/patches/glibc-bootstrap-system.patch: Adjust patch to work correctly with new architectures. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-25gnu: Add marble-qt.Wiktor Żelazny
* gnu/packages/patches/marble-qt-add-qt-headers.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/geo.scm (marble-qt): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-24gnu: esmtp: Fix build with libesmtp >= 1.1.0.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (esmtp)[source]: Add patch. * gnu/packages/patches/esmtp-add-lesmtp.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2021-07-21gnu: extempore: Update to 0.8.9.Giacomo Leidi
* gnu/packages/music.scm (extempore): Update to 0.8.6. [source]: Portaudio is no more in-tree. [arguments]: Load external libraries through patched CMakeLists.txt. [phases]: Symlink assets. * gnu/packages/patches/extempore-unbundle-external-dependencies.patch: Update accordingly. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-07-16gnu: Add transmission-remote-gtk.Justin Veilleux
* gnu/packages/bittorrent.scm (transmission-remote-gtk): New variable. * gnu/packages/patches/transmission-remote-gtk-fix-appstream.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Leo Famulari <leo@famulari.name>
2021-07-16gnu: Add ark.Z572
* gnu/packages/kde-utils.scm (ark): New variable. * gnu/packages/patches/ark-skip-xar-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-07-12gnu: proot: Update to 5.2.0-alpha.Maxim Cournoyer
This allows proot to be built for aarch64-linux and armhf-linux. * gnu/packages/patches/proot-test-fhs.patch: Delete patch. * gnu/local.mk (dist_patch_DATA): Un-register it. * gnu/packages/linux.scm: Update to 5.2.0-alpha. [patches]: Remove field. [supported-system]: New field. [tests?]: Disable for ARM-based systems. [phases]{fix-fhs-assumptions-in-tests, set-shell-file-name}: Combine into... {patch-sources}: ... this new phase. {build-manpage}: New phase. {check}: Add seccomp issue URL in comment. [native-inputs]: Add coreutils issue URL in comment. Add pkg-config and python-docutils. [inputs]: Add libarchive.
2021-07-09gnu: Add emacs-telega-server.Zhu Zihao
* gnu/packages/emacs-xyz.scm (emacs-telega-server): New variable. * gnu/packages/patches/emacs-telega-path-placeholder.patch: New file. * gnu/package/patches/emacs-telega-patch-server-functions.patch: Remove stale patch. * gnu/local.mk (dist_patch_DATA): Update accordingly. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-07-09gnu: python-seaborn: Update to 0.11.1.Ludovic Courtès
* gnu/packages/patches/python-seaborn-kde-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python-xyz.scm (python-seaborn): Use it, and update to 0.11.1.
2021-07-07gnu: VTK 8: Re-fix a build failure with recent versions of freetype.Leo Famulari
* gnu/packages/patches/vtk-8-fix-freetypetools-build-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image-processing.scm (vtk-8): Dis-inherit from VTK. Use the package definition that predated the update to VTK 9, taken from commit f4dc8ac6dfa036d98aa0990ae22268a9650899d0.
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