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2020-06-12gnu: guile-sqlite3: Update to 0.1.1....* gnu/packages/guile.scm (guile-sqlite3): Update to 0.1.1. [source]: Remove 'patches', 'modules', and 'snippet'. * gnu/packages/patches/guile-sqlite3-fix-cross-compilation.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Ludovic Courtès
2020-06-11gnu: Add exercism and dependencies....* gnu/packages/education.scm (exercism): New variable. * gnu/packages/patches/exercism-disable-self-update.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/golang.scm (go-github-com-spf13-afero) (go-github-com-spf13-cast) (go-github-com-spf13-cobra) (go-github-com-spf13-jwalterweatherman) (go-github-com-spf13-viper) (go-github-com-fsnotify-fsnotify) (go-github-com-magiconair-properties) (go-github-com-pelletier-go-toml) (go-github-com-subosito-gotenv) (go-gopkg-in-ini-v1) (go-github-com-mitchellh-mapstructure): New variables. Jakub Kądziołka
2020-06-09gnu: dhall: Disable network tests differently....* gnu/packages/dhall.scm (dhall)[source]: Remove patch. [arguments]: Rename ‘remove-more-tests’ phase to ‘remove-network-tests’. Identify the tests by name instead of by content. * gnu/packages/patches/dhall-remove-network-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-06-08gnu: hurd: Update to upstream Hurd-reserved xattr index....This enables setting (and reading) passive translators when preparing a Hurd file system from GNU/Linux. * gnu/packages/patches/hurd-xattr.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/hurd.scm (hurd): Use it. Jan (janneke) Nieuwenhuizen
2020-06-06gnu: emacs-zones: Update to 2019.7.13....* gnu/packages/emacs-xyz.scm (emacs-zones): Update to 2019.7.13. [source]: Use GNU ELPA repository instead of GitHub. Remove unnecessary patch. * gnu/packages/patches/emacs-zones-called-interactively.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Apply file deletion. Nicolas Goaziou
2020-06-06gnu: openscad: Add patch to fix build....* gnu/packages/patches/openscad-parser-boost-1.72.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/engineering.scm (openscad)[source]: Use it. Steve Sprang
2020-06-06gnu: emacs-haskell-mode: Update to 17.1....* gnu/packages/emacs-xyz.scm (emacs-haskell-mode): Update to 17.1. [arguments]: Add phase to skip failing tests. * gnu/packages/patches/haskell-mode-make-check.patch: * gnu/packages/patches/haskell-mode-unused-variables.patch: Delete files. * gnu/local.mk: Apply files removal. Nicolas Goaziou
2020-06-05gnu: websocketpp: Update to 0.8.2....* gnu/packages/web.scm (websocketpp): Update to 0.8.2. [source]: Replace patch. * gnu/packages/patches/websocketpp-fix-for-boost-1.70.patch: Delete file. * gnu/packages/patches/websocketpp-fix-for-cmake-3.15.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2020-06-03gnu: java-openjfx-build: Add helpful patch....* gnu/packages/java.scm (java-openjfx-build)[source]: Use it. * gnu/packages/patches/java-openjfx-build-jdk_version.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Alexey Abramov <levenson@mmer.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alexey Abramov
2020-06-02gnu: dbus: Fix CVE-2020-12049....* gnu/packages/patches/dbus-CVE-2020-12049.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/glib.scm (dbus/fixed): New variable. (dbus)[replacement]: New field. Marius Bakke
2020-06-02gnu: icecat: Update to 68.9.0-guix0-preview1 [security fixes]....Includes fixes for CVE-2020-12399 and CVE-2020-12405. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version. Mark H Weaver
2020-06-02gnu: nss: Fix CVE-2020-12399 via graft....* gnu/packages/patches/nss-CVE-2020-12399.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/nss.scm (nss/fixed): New variable. (nss)[replacement]: Add field. Mark H Weaver
2020-05-31gnu: plotutils: Build libplotter....* gnu/packages/plotutils.scm (plotutils)[origin]: Port the patch to a snippet, which catches all the problematic occurrences. [configure-flags]: Pass "--enable-libplotter". [description]: Mention the newly added C++ libplotter library. Maxim Cournoyer
2020-05-31gnu: Add lib2geom....* gnu/packages/graphics.scm (lib2geom): New variable. * gnu/packages/patches/lib2geom-enable-assertions.patch, lib2geom-link-tests-against-glib.patch, lib2geom-use-system-googletest.patch: New files. * gnu/local.mk (dist_patch_DATA): Register new patches. Maxim Cournoyer
2020-06-01gnu: Add pypy3....* gnu/packages/python.scm (pypy3): New public variable. * gnu/packages/patches/pypy3-7.3.1-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it Signed-off-by: Ludovic Courtès <ludo@gnu.org> Lars-Dominik Braun
2020-06-01gnu: biber: Update to 2.12....Fixes <https://bugs.gnu.org/41400>. Reported by Mikhail Tsykalov <tsymsh@gmail.com>. This essentially reverts 40fd909e3ddee2c46a27a4fe92ed49d3e7ffb413. This is a followup to the TeX Live 2019 update in 85892948bd9fb5fcc3409a60204cc8b14a4eb030. * gnu/packages/tex.scm (biber): Update to 2.12. Ludovic Courtès
2020-05-29gnu: Add dhall....* gnu/packages/dhall.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. (dist_patch_DATA): Add new patch. * gnu/packages/patches/dhall-remove-network-tests.patch: Add patch to remove dhall network tests. Signed-off-by: Leo Famulari <leo@famulari.name> John Soo
2020-05-29gnu: ruby-sanitize: Update to 5.1.0....* gnu/packages/patches/ruby-sanitize-system-libxml.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ruby.scm (ruby-sanitize): Update to 5.1.0. [source]: Change to GIT-FETCH. Add patch. [native-inputs]: Remove BUNDLER, RUBY-REDCARPET, and RUBY-YARD. Marius Bakke
2020-05-28gnu: Transmission: Fix CVE-2018-10756....* gnu/packages/patches/transmission-CVE-2018-10756.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bittorrent.scm (transmission)[source]: Use it. Leo Famulari
2020-05-27gnu: emacs-magit: Update to commit d05545e....* gnu/packages/emacs-xyz.scm (emacs-magit): Update to commit 68b5a13fa1b6b122d4a2547b8c415aadff83d8ca. [origin]: Remove obsoleted patches and snippets. [build-system]: Switch to the emacs-build-system. [arguments]: Remove the #:modules and #:imported-modules arguments. Enable tests. Remove the #:make-flags and #:test-target argument. Specify the \#:test-command argument. [phases]{patch}: Remove phase. {build-info-manual, set-magit-version, configure-git} {disable-tramp-test}: New phases. {configure}: Do not delete phase. {patch-exec-paths}: Adapt file names. * gnu/packages/patches/emacs-magit-log-format-author-margin.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. Maxim Cournoyer
2020-05-27gnu: Add emacs-libgit....* gnu/packages/emacs-xyz.scm (emacs-libgit): New variable. * gnu/packages/patches/emacs-libgit-use-system-libgit2.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. Maxim Cournoyer
2020-05-26gnu: netsurf: Update to 3.10....* gnu/packages/web.scm (netsurf): Update to 3.10. * gnu/packages/patches/netsurf-system-utf8proc.patch: Adjust to new source. Eric Bavier
2020-05-26gnu: DarkIce: Update to 1.4....* gnu/packages/audio.scm (darkice): Update to 1.4. [source]: Update URL. Remove obsolete patch. * gnu/packages/patches/darkice-workaround-fpermissive-error.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari
2020-05-26gnu: grub: Allow "grub-bios-setup" to operate on raw disk-images....* gnu/packages/patches/grub-setup-root.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bootloaders.scm (grub): Apply it. Mathieu Othacehe
2020-05-26gnu: lxsession: Update to 0.5.5....* gnu/packages/lxde.scm (lxsession): Update to 0.5.5. [source]: Remove upstreamed patch. * gnu/packages/patches/lxsession-use-gapplication.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-05-25gnu: libnftnl: Update to 1.1.6....* gnu/packages/linux.scm (libnftnl): Update to 1.1.6. [source]: Remove patch. * gnu/packages/patches/libnftnl-dont-check-NFTNL_FLOWTABLE_SIZE.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-05-25gnu: enlightenment: Fix screen unlocking....Without this the password is never collected and checked. * gnu/packages/patches/enlightenment-fix-setuid-path.patch: Fix patch so that it collects the entered password. Efraim Flashner
2020-05-25gnu: libexif: Update to 0.6.22 [security fixes]....This fixes CVE-2020-13114, CVE-2020-13113, CVE-2020-13112, CVE-2020-0093, CVE-2019-9278, and CVE-2020-12767. * gnu/packages/patches/libexif-CVE-2016-6328.patch, gnu/packages/patches/libexif-CVE-2017-7544.patch, gnu/packages/patches/libexif-CVE-2018-20030.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/photo.scm (libexif): Update to 0.6.22. [source](uri): Adjust for upstream GitHub migration. Marius Bakke
2020-05-24gnu: enlightenment: Update to 0.24.0....* gnu/packages/enlightenment.scm (enlightenment): Update to 0.24.0. [arguments]: Change configure-flags to hardcode efl binary locations. Remove custom 'fix-dot-desktop-creation phase. Update 'set-system-actions phase. * gnu/packages/patches/enlightenment-fix-setuid-path.patch: Update for new upstream version. * gnu/services/desktop.scm (enlightenment-setuid-programs): Same. Efraim Flashner
2020-05-24gnu: pidgin: Fix build with Meson network-manager....This is a follow-up commit to 255ff74f3ab514a76068f6cfccc7f8dbcf8b7f3f: building network-manager with Meson breaks users of NetworkManager.pc. * gnu/packages/messaging.scm (pidgin)[source]: Add pidgin-libnm.patch. Force re-bootstrapping in a new snippet. [native-inputs]: Add autoconf, automake, and libtool. * gnu/packages/patches/pidgin-libnm.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2020-05-23gnu: deja-dup: Update to 40.6....* gnu/packages/gnome.scm (deja-dup): Update to 40.6. [origin]: Use gitlab.gnome.org since the project migrated away from launchpad. [home-page]: Use 'wiki.gnome.org' instead of 'launchpad.net'. [build-system]: Switch to 'meson-build-system' because upstream removed cmake support. [arguments]: Enable tests. Remove arguments 'modules', 'imported-modules' and 'test-target'. Use argument 'glib-or-gtk?'. Replace configure-flags to only adjust 'RUN_PATH'. Use standard phases for 'configure' and 'check'. Adjust and rename phase 'patch-lockfile-deletion' to 'patch-paths'. Add phases 'patch-libgpg-error' and 'skip-gtk-update-icon-cache'. [inputs]: Remove 'libpeas', 'gobject-introspection'. Replace 'python-2' and 'python2-pygobject' with python-3 versions. Add 'json-glib', 'libsoup' and 'libgpg-error'. [native-inputs]: Remove 'cmake-minimal' and 'intltool'. Add 'appstream-glib','desktop-file-utils', 'glib:bin' and 'gobject-introspection'. * gnu/packages/patches/deja-dup-use-ref-keyword-for-iter.patch: Delete file. Brice Waegeneire
2020-05-23gnu: python-argcomplete: Update to 1.11.1....* gnu/packages/python-xyz.scm (python-argcomplete)[version]: Update to 1.11.1. [arguments]: Remove, obsolete. [inputs]: Remove as well. * gnu/packages/patches/python-argcomplete-1.11.1-fish31.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Lars-Dominik Braun
2020-05-22gnu: git-annex: Update to 8.20200522....* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200522. [source]: Remove patch that is now in a release. * gnu/packages/patches/git-annex-S3v4.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Leo Famulari <leo@famulari.name> Kyle Meyer
2020-05-22gnu: network-manager: Appease guix lint....* gnu/packages/gnome.scm (network-manager)[home-page]: Use the permenant redirect URL. * gnu/packages/patches/nm-plugin-path.patch: Renamed to 'gnu/packages/patches/network-manager-plugin-path.patch'. Brice Waegeneire
2020-05-22gnu: guile-fibers: Add patch to fix resource leak....guile-fibers@1.0.0 has a resource leak where run-fibers will only destroy one scheduler, but it creates as many as there are cpu cores by default (see https://github.com/wingo/fibers/issues/36). This causes the tests to fail on systems with many cores, and can cause guile to crash under certain circumstances. This fixes that resource leak. At present neither git master nor the latest release has fixed this yet. * gnu/packages/patches/guile-fibers-destroy-peer-schedulers.patch: New patch. * gnu/local.mk: Add it to the list of patches. * gnu/packages/guile-xyz.scm (guile-fibers): Use it. Caleb Ristvedt
2020-05-20gnu: python-shouldbe: Python 3.8 compatibility....* gnu/packages/patches/python-shouldbe-0.1.2-cpy3.8.patch: Add compatibility patch. * gnu/local.mk (dist_patch_DATA): Add new file. * gnu/packages/python-xyz.scm (python-shouldbe)[source]: Add patch. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Lars-Dominik Braun
2020-05-20gnu: http-parser: Fix build [and guix pull] on armhf-linux....* gnu/packages/web.scm (http-parser)[source]: Add patch. * gnu/packages/patches/http-parser-fix-assertion-on-armhf.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2020-05-18gnu: kpmcore: Update to 4.1.0....* gnu/packages/patches/kpmcore-fix-tests.patch, gnu/packages/patches/kpmcore-remove-broken-test.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/kde.scm (kpmcore): Update to 4.1.0. [source](patches): Remove. Marius Bakke
2020-05-17gnu: soundconverter: Update to 3.0.2....* gnu/packages/gnome.scm (soundconverter): Update to 3.0.2. [source]: Remove upstreamed patch. * gnu/packages/patches/soundconverter-remove-gconf-dependency.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-05-16gnu: multipath-tools: Update to 0.8.4....* gnu/packages/patches/multipath-tools-sans-systemd.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/linux.scm (multipath-tools): Update to 0.8.4. [source](patches): New field. [arguments]: Add #:parallel-build?. Add phase to fix erroneous compiler warning. Marius Bakke
2020-05-16gnu: Add openjdk13....* gnu/packages/java.scm (openjdk13): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Not Zed
2020-05-13gnu: ruby-2.4: Update to 2.4.10....* gnu/packages/ruby.scm (ruby-2.4): Update to 2.4.10. [source]: Remove a now redundant patch * gnu/packages/patches/ruby-rubygems-276-for-ruby24.patch: Delete file. * gnu/local.mk: Remove deleted patch. Christopher Baines
2020-05-13gnu: Add openresolv....* gnu/packages/dns.scm (openresolv): New variable. Brice Waegeneire
2020-05-13gnu: glm: Update to 0.9.9.8....* gnu/packages/patches/glm-restore-install-target.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/maths.scm (glm): Update to 0.9.9.8. [arguments]: New field. Marius Bakke
2020-05-12gnu: julia: Fix patch....* gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch: replaced with actual patch. It was a patch creating the patch. Co-authored-by: Ludovic Courtès <ludo@gnu.org> nixo
2020-05-11gnu: bitcoin: Fix test failure with Python 3.8....* gnu/packages/patches/bitcoin-core-python-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/finance.scm (bitcoin-core)[source](patches): New field. Marius Bakke
2020-05-11gnu: OpenEXR: Update to 2.5.0....* gnu/packages/patches/ilmbase-openexr-pkg-config.patch: Delete file. * gnu/packages/patches/ilmbase-fix-test-arm.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/graphics.scm (ilmbase): Update to 2.5.0. Marius Bakke
2020-05-11gnu: git-annex: Add support for v4 of S3 support....* gnu/packages/haskell-apps.scm (git-annex)[source]: Add patch. * gnu/packages/patches/git-annex-S3v4.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2020-05-10gnu: scribus: Fix build against poppler-0.86....* gnu/packages/scribus.scm (scribus)[source](patches): New field. * gnu/packages/patches/scribus-1.5.5-poppler-0.86-build-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add new patch. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Boris A. Dekshteyn
2020-05-08gnu: QEMU: Update to 5.0.0....* gnu/packages/patches/qemu-CVE-2020-1711.patch, gnu/packages/patches/qemu-CVE-2020-7039.patch, gnu/packages/patches/qemu-CVE-2020-7211.patch, gnu/packages/patches/qemu-CVE-2020-8608.patch, gnu/packages/patches/qemu-fix-documentation-build-failure.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/virtualization.scm (qemu)[source](patches): Remove. [arguments]: Add phase 'patch-/bin/sh-references'. In the 'configure' phase, add shebang substitutions. Remove phase 'prevent-network-configuration'. [inputs]: Change from LIBCAP to LIBCAP-NG. Marius Bakke
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