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2020-06-13Merge branch 'staging'Marius Bakke
2020-06-12gnu: guile-sqlite3: Update to 0.1.1.Ludovic Courtès
* gnu/packages/guile.scm (guile-sqlite3): Update to 0.1.1. [source]: Remove 'patches', 'modules', and 'snippet'. * gnu/packages/patches/guile-sqlite3-fix-cross-compilation.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2020-06-11Merge branch 'master' into stagingMarius Bakke
2020-06-11gnu: Add exercism and dependencies.Jakub Kądziołka
* gnu/packages/education.scm (exercism): New variable. * gnu/packages/patches/exercism-disable-self-update.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/golang.scm (go-github-com-spf13-afero) (go-github-com-spf13-cast) (go-github-com-spf13-cobra) (go-github-com-spf13-jwalterweatherman) (go-github-com-spf13-viper) (go-github-com-fsnotify-fsnotify) (go-github-com-magiconair-properties) (go-github-com-pelletier-go-toml) (go-github-com-subosito-gotenv) (go-gopkg-in-ini-v1) (go-github-com-mitchellh-mapstructure): New variables.
2020-06-09gnu: dhall: Disable network tests differently.Tobias Geerinckx-Rice
* gnu/packages/dhall.scm (dhall)[source]: Remove patch. [arguments]: Rename ‘remove-more-tests’ phase to ‘remove-network-tests’. Identify the tests by name instead of by content. * gnu/packages/patches/dhall-remove-network-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-06-08gnu: calibre: Update to 4.18.0.Marius Bakke
* gnu/packages/patches/calibre-remove-test-bs4.patch, gnu/packages/patches/calibre-msgpack-compat.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ebook.scm (calibre): Update to 4.18.0. [source](patches): Remove obsolete patches. [source](snippet): Disable test for bundled odfpy. [inputs]: Add HUNSPELL, HYPHEN, PYTHON2-BEAUTIFULSOUP4, PYTHON2-PYQTWEBENGINE, and QTWEBENGINE. [arguments]: Add phase 'patch-more-shebangs'. Adjust configure phase to set HOME and make fonts available. Simplify one substitution, and provide the absolute file name of 'sip'.
2020-06-08Merge branch 'master' into stagingMarius Bakke
2020-06-08gnu: hurd: Update to upstream Hurd-reserved xattr index.Jan (janneke) Nieuwenhuizen
This enables setting (and reading) passive translators when preparing a Hurd file system from GNU/Linux. * gnu/packages/patches/hurd-xattr.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/hurd.scm (hurd): Use it.
2020-06-07gnu: python-pyqt: Update to 5.14.2.Marius Bakke
* gnu/packages/qt.scm (python-pyqt): Update to 5.14.2. [source](uri): Add PyPI mirror. [source](patches): Remove obsolete. * gnu/packages/patches/pyqt-unbundled-qt.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2020-06-06gnu: KDE: Update to 20.04.1.Marius Bakke
* gnu/packages/patches/akonadi-paths.patch: Adjust for upstream changes. * gnu/packages/patches/kdepim-runtime-Fix-missing-link-libraries.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/kde-internet.scm (kget, kopete, krdc, libgravatar): Update to 20.04.1. [source](uri): Adjust for new upstream location. * gnu/packages/kde-multimedia.scm (audiocd-kio, dragon, ffmpegthumbs, juk, k3b, kamoso, kmix, kwave, libkcddb, libkcompactdisc): Likewise. * gnu/packages/kde-systemtools.scm (dolphin, dolphin-plugins, khelpcenter, konsole, krfb, ksystemlog): Update to 20.04.1. [source](uri): Adjust for new upstream location. * gnu/packages/kde-utils.scm (kate, kmag, kmousetool, kmouth, sweeper): Update to 20.04.1. [source](uri): Adjust for new upstream location. * gnu/packages/kde.scm (baloo-widgets, libkomparediff2, kqtquickcharts, grantleetheme, kcachegrind, libkdegames, zeroconf-ioslave): Update to 20.04.1. [source](uri): Adjust for new upstream location. (grantleetheme)[inputs]: Add KGUIADDONS. * gnu/packages/kde-pim.scm (akonadi, akonadi-calendar, akonadi-contacts, akonadi-mime, akonadi-notes, akonadi-search, kincidenceeditor, kaddressbook, kalarmcal, kblog, kcalendarsupport, kcalutils, kdav, kdepim-apps-libs, kdepim-runtime, keventviews, kgpg, kidentitymanagement, kimap, kldap, kleopatra, kmail, kmailcommon, kmailimporter, kmailtransport, kmbox, kmessagelib, kmime, knotes, kontactinterface, korganizer, kpimcommon, kpimtextedit, ksmtp, ktnef, libkdepim, libkgapi, libkleo, libksieve): Update to 20.04.1. [source](uri): Adjust to current. (akonadi)[inputs]: Remove KDBUSADDONS and KDESIGNERPLUGIN. (akonadi-calendar)[inputs]: Remove KDBUSADDONS. (kdepim-runtime)[source](patches): Remove. [arguments]: Add phase 'extend-CPLUS_INCLUDE_PATH'. [inputs]: Remove KDBUSADDONS and KICONTHEMES. (kmessagelib)[arguments]: Add phase 'extend-CPLUS_INCLUDE_PATH. [inputs]: Add QCA. (kdepim-apps-libs)[inputs]: Remove KDBUSADDONS and KICONTHEMES. (knotes)[inputs]: Remove KDBUSADDONS. (kpimcommon)[inputs]: Remove KDBUSADDONS and KCOMPLETION. (libksieve)[arguments]: Disable one more test. (korganizer)[arguments]: Disable one test.
2020-06-06gnu: Remove nss/fixed.Marius Bakke
The merge preceding this commit ignored the nss replacement added in commit 7bc396bf353c5550c49b3f8791b34072ba417d90. This commit removes the remaining bits, because the fix is already present in nss@3.52.1. * gnu/packages/patches/nss-CVE-2020-12399.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/nss.scm (nss/fixed): Remove variable.
2020-06-06Merge branch 'master' into stagingMarius Bakke
2020-06-06gnu: emacs-zones: Update to 2019.7.13.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-zones): Update to 2019.7.13. [source]: Use GNU ELPA repository instead of GitHub. Remove unnecessary patch. * gnu/packages/patches/emacs-zones-called-interactively.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Apply file deletion.
2020-06-06gnu: openscad: Add patch to fix build.Steve Sprang
* gnu/packages/patches/openscad-parser-boost-1.72.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/engineering.scm (openscad)[source]: Use it.
2020-06-06gnu: emacs-haskell-mode: Update to 17.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-haskell-mode): Update to 17.1. [arguments]: Add phase to skip failing tests. * gnu/packages/patches/haskell-mode-make-check.patch: * gnu/packages/patches/haskell-mode-unused-variables.patch: Delete files. * gnu/local.mk: Apply files removal.
2020-06-05gnu: websocketpp: Update to 0.8.2.Tobias Geerinckx-Rice
* gnu/packages/web.scm (websocketpp): Update to 0.8.2. [source]: Replace patch. * gnu/packages/patches/websocketpp-fix-for-boost-1.70.patch: Delete file. * gnu/packages/patches/websocketpp-fix-for-cmake-3.15.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-06-03gnu: java-openjfx-build: Add helpful patch.Alexey Abramov
* gnu/packages/java.scm (java-openjfx-build)[source]: Use it. * gnu/packages/patches/java-openjfx-build-jdk_version.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Alexey Abramov <levenson@mmer.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-02gnu: dbus: Fix CVE-2020-12049.Marius Bakke
* gnu/packages/patches/dbus-CVE-2020-12049.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/glib.scm (dbus/fixed): New variable. (dbus)[replacement]: New field.
2020-06-02gnu: icecat: Update to 68.9.0-guix0-preview1 [security fixes].Mark H Weaver
Includes fixes for CVE-2020-12399 and CVE-2020-12405. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
2020-06-02gnu: nss: Fix CVE-2020-12399 via graft.Mark H Weaver
* gnu/packages/patches/nss-CVE-2020-12399.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/nss.scm (nss/fixed): New variable. (nss)[replacement]: Add field.
2020-05-31gnu: plotutils: Build libplotter.Maxim Cournoyer
* gnu/packages/plotutils.scm (plotutils)[origin]: Port the patch to a snippet, which catches all the problematic occurrences. [configure-flags]: Pass "--enable-libplotter". [description]: Mention the newly added C++ libplotter library.
2020-05-31gnu: Add lib2geom.Maxim Cournoyer
* gnu/packages/graphics.scm (lib2geom): New variable. * gnu/packages/patches/lib2geom-enable-assertions.patch, lib2geom-link-tests-against-glib.patch, lib2geom-use-system-googletest.patch: New files. * gnu/local.mk (dist_patch_DATA): Register new patches.
2020-06-01gnu: Add pypy3.Lars-Dominik Braun
* gnu/packages/python.scm (pypy3): New public variable. * gnu/packages/patches/pypy3-7.3.1-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-01gnu: biber: Update to 2.12.Ludovic Courtès
Fixes <https://bugs.gnu.org/41400>. Reported by Mikhail Tsykalov <tsymsh@gmail.com>. This essentially reverts 40fd909e3ddee2c46a27a4fe92ed49d3e7ffb413. This is a followup to the TeX Live 2019 update in 85892948bd9fb5fcc3409a60204cc8b14a4eb030. * gnu/packages/tex.scm (biber): Update to 2.12.
2020-05-29Merge branch 'master' into stagingMarius Bakke
2020-05-29gnu: Add dhall.John Soo
* gnu/packages/dhall.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. (dist_patch_DATA): Add new patch. * gnu/packages/patches/dhall-remove-network-tests.patch: Add patch to remove dhall network tests. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-05-29gnu: ruby-sanitize: Update to 5.1.0.Marius Bakke
* gnu/packages/patches/ruby-sanitize-system-libxml.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ruby.scm (ruby-sanitize): Update to 5.1.0. [source]: Change to GIT-FETCH. Add patch. [native-inputs]: Remove BUNDLER, RUBY-REDCARPET, and RUBY-YARD.
2020-05-28gnu: Transmission: Fix CVE-2018-10756.Leo Famulari
* gnu/packages/patches/transmission-CVE-2018-10756.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bittorrent.scm (transmission)[source]: Use it.
2020-05-27gnu: emacs-magit: Update to commit d05545e.Maxim Cournoyer
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to commit 68b5a13fa1b6b122d4a2547b8c415aadff83d8ca. [origin]: Remove obsoleted patches and snippets. [build-system]: Switch to the emacs-build-system. [arguments]: Remove the #:modules and #:imported-modules arguments. Enable tests. Remove the #:make-flags and #:test-target argument. Specify the \#:test-command argument. [phases]{patch}: Remove phase. {build-info-manual, set-magit-version, configure-git} {disable-tramp-test}: New phases. {configure}: Do not delete phase. {patch-exec-paths}: Adapt file names. * gnu/packages/patches/emacs-magit-log-format-author-margin.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it.
2020-05-27gnu: Add emacs-libgit.Maxim Cournoyer
* gnu/packages/emacs-xyz.scm (emacs-libgit): New variable. * gnu/packages/patches/emacs-libgit-use-system-libgit2.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch.
2020-05-26Merge branch 'master' into stagingMarius Bakke
2020-05-26gnu: libdrm: Update to 2.4.101.Marius Bakke
* gnu/packages/patches/libdrm-symbol-check.patch: Delete file. * gnu/packages/patches/libdrm-realpath-virtio.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/xdisorg.scm (libdrm): Update to 2.4.101. [source](uri): Adjust for new .tar.xz tarball. [source](patches): Adjust patch list as above.
2020-05-26Merge branch 'master' into stagingMarius Bakke
2020-05-26gnu: Qt: Update to 5.14.2.TomZ
* gnu/packages/qt.scm (qtsvg, qtimageformats, qtx11extras, qtxmlpatterns, qtconnectivity, qtwebsockets, qtsensors, qtmultimedia, qtserialport, qtserialbus, qtwebchannel, qtwebview, qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcharts, qtdatavis3d, qtnetworkauth, qtspeech, qtwebengine): Update to 5.14.2. (qtcanvas3d): Remove variable. Upstream deprecated it. (qtbase)[source](patches): Remove qtbase-QTBUG-81715.patch. [arguments]: Drop X11lib substitution: patched dir no longer exists. (qtwayland)[arguments]: Disable two tests, and add phase to prevent fatal DBus warnings. (qtwebglplugin)[inputs]: Add ZLIB. (qtremoteobjects): Disable some tests that fail due to missing network. (qtdeclarative)[native-inputs]: Add VULKAN-HEADERS. (qtwebengine)[source](snippet): Adjust list of preserved files. [inputs]: Add VULKAN-HEADERS. * gnu/packages/patches/qtbase-QTBUG-81715.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2020-05-26gnu: KDE Frameworks: Update to 5.70.Marius Bakke
* gnu/packages/patches/kinit-kdeinit-extra_libs.patch: Adjust for upstream changes. * gnu/packages/kde-frameworks.scm (extra-cmake-modules, attica, bluez-qt, breeze-icons, kapidox, karchive, kcalendarcore, kcodecs, kconfig, kcoreaddons, kdbusaddons, kdnssd, kguiaddons, kholidays, ki18n, kidletime, kirigami, kitemmodels, kitemviews, kplotting, ksyntaxhighlighting, kwidgetsaddons, kwindowsystem, modemmanager-qt, networkmanager-qt, oxygen-icons, prison, qqc2-desktop-style, solid, sonnet, threadweaver, kactivities, kauth, kcompletion, kcontacts, kcrash, kdoctools, kfilemetadata, kimageformats, kjobwidgets, knotifications, kpackage, kpty, kunitconversion, syndication, baloo, kactivities-stats, kbookmarks, kcmutils, kconfigwidgets, kdeclarative, kded, kdesignerplugin, kdesu, kdewebkit, kemoticons, kglobalaccel, kiconthemes, kinit, knewstuff, knotifyconfig ,kparts, kpeople, krunner, kservice, ktextwidgets, kwallet, kxmlgui, kxmlrpcclient, purpose, kde-frameworkintegration, kdelibs4support, khtml, kjs, kjsembed, kmediaplayer, kross): Update to 5.70.0. (kwayland)[inputs]: Add QTWAYLAND. (kparts)[arguments]: New field. (kinit)[inputs]: Add KDBUSADDONS. (kcmutils)[inputs]: Add KGUIADDONS. (krunner)[native-inputs]: Add DBUS. [arguments]: Run tests with "dbus-launch". (baloo)[arguments]: Remove broken test substitution. Disable one other test. (ktexteditor, plasma-framework): Update to 5.70.1. (kio): Likewise. [inputs]: Move KWINDOWSYSTEM ... [propagated-inputs]: ... here.
2020-05-26Merge branch 'master' into stagingMarius Bakke
2020-05-26gnu: netsurf: Update to 3.10.Eric Bavier
* gnu/packages/web.scm (netsurf): Update to 3.10. * gnu/packages/patches/netsurf-system-utf8proc.patch: Adjust to new source.
2020-05-26gnu: DarkIce: Update to 1.4.Leo Famulari
* gnu/packages/audio.scm (darkice): Update to 1.4. [source]: Update URL. Remove obsolete patch. * gnu/packages/patches/darkice-workaround-fpermissive-error.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-05-26gnu: grub: Allow "grub-bios-setup" to operate on raw disk-images.Mathieu Othacehe
* gnu/packages/patches/grub-setup-root.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bootloaders.scm (grub): Apply it.
2020-05-26gnu: lxsession: Update to 0.5.5.Tobias Geerinckx-Rice
* gnu/packages/lxde.scm (lxsession): Update to 0.5.5. [source]: Remove upstreamed patch. * gnu/packages/patches/lxsession-use-gapplication.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-05-25gnu: libnftnl: Update to 1.1.6.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (libnftnl): Update to 1.1.6. [source]: Remove patch. * gnu/packages/patches/libnftnl-dont-check-NFTNL_FLOWTABLE_SIZE.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-05-25gnu: enlightenment: Fix screen unlocking.Efraim Flashner
Without this the password is never collected and checked. * gnu/packages/patches/enlightenment-fix-setuid-path.patch: Fix patch so that it collects the entered password.
2020-05-25gnu: libexif: Update to 0.6.22 [security fixes].Marius Bakke
This fixes CVE-2020-13114, CVE-2020-13113, CVE-2020-13112, CVE-2020-0093, CVE-2019-9278, and CVE-2020-12767. * gnu/packages/patches/libexif-CVE-2016-6328.patch, gnu/packages/patches/libexif-CVE-2017-7544.patch, gnu/packages/patches/libexif-CVE-2018-20030.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/photo.scm (libexif): Update to 0.6.22. [source](uri): Adjust for upstream GitHub migration.
2020-05-24gnu: enlightenment: Update to 0.24.0.Efraim Flashner
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.24.0. [arguments]: Change configure-flags to hardcode efl binary locations. Remove custom 'fix-dot-desktop-creation phase. Update 'set-system-actions phase. * gnu/packages/patches/enlightenment-fix-setuid-path.patch: Update for new upstream version. * gnu/services/desktop.scm (enlightenment-setuid-programs): Same.
2020-05-24gnu: pidgin: Fix build with Meson network-manager.Tobias Geerinckx-Rice
This is a follow-up commit to 255ff74f3ab514a76068f6cfccc7f8dbcf8b7f3f: building network-manager with Meson breaks users of NetworkManager.pc. * gnu/packages/messaging.scm (pidgin)[source]: Add pidgin-libnm.patch. Force re-bootstrapping in a new snippet. [native-inputs]: Add autoconf, automake, and libtool. * gnu/packages/patches/pidgin-libnm.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-05-23gnu: deja-dup: Update to 40.6.Brice Waegeneire
* gnu/packages/gnome.scm (deja-dup): Update to 40.6. [origin]: Use gitlab.gnome.org since the project migrated away from launchpad. [home-page]: Use 'wiki.gnome.org' instead of 'launchpad.net'. [build-system]: Switch to 'meson-build-system' because upstream removed cmake support. [arguments]: Enable tests. Remove arguments 'modules', 'imported-modules' and 'test-target'. Use argument 'glib-or-gtk?'. Replace configure-flags to only adjust 'RUN_PATH'. Use standard phases for 'configure' and 'check'. Adjust and rename phase 'patch-lockfile-deletion' to 'patch-paths'. Add phases 'patch-libgpg-error' and 'skip-gtk-update-icon-cache'. [inputs]: Remove 'libpeas', 'gobject-introspection'. Replace 'python-2' and 'python2-pygobject' with python-3 versions. Add 'json-glib', 'libsoup' and 'libgpg-error'. [native-inputs]: Remove 'cmake-minimal' and 'intltool'. Add 'appstream-glib','desktop-file-utils', 'glib:bin' and 'gobject-introspection'. * gnu/packages/patches/deja-dup-use-ref-keyword-for-iter.patch: Delete file.
2020-05-23gnu: python-argcomplete: Update to 1.11.1.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-argcomplete)[version]: Update to 1.11.1. [arguments]: Remove, obsolete. [inputs]: Remove as well. * gnu/packages/patches/python-argcomplete-1.11.1-fish31.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2020-05-22gnu: git-annex: Update to 8.20200522.Kyle Meyer
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200522. [source]: Remove patch that is now in a release. * gnu/packages/patches/git-annex-S3v4.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-05-22gnu: network-manager: Appease guix lint.Brice Waegeneire
* gnu/packages/gnome.scm (network-manager)[home-page]: Use the permenant redirect URL. * gnu/packages/patches/nm-plugin-path.patch: Renamed to 'gnu/packages/patches/network-manager-plugin-path.patch'.
2020-05-22gnu: guile-fibers: Add patch to fix resource leak.Caleb Ristvedt
guile-fibers@1.0.0 has a resource leak where run-fibers will only destroy one scheduler, but it creates as many as there are cpu cores by default (see https://github.com/wingo/fibers/issues/36). This causes the tests to fail on systems with many cores, and can cause guile to crash under certain circumstances. This fixes that resource leak. At present neither git master nor the latest release has fixed this yet. * gnu/packages/patches/guile-fibers-destroy-peer-schedulers.patch: New patch. * gnu/local.mk: Add it to the list of patches. * gnu/packages/guile-xyz.scm (guile-fibers): Use it.