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2017-12-15gnu: eigen: Update to 3.3.4.Eric Bavier
* gnu/packages/patches/eigen-arm-neon-fixes.patch: New patch. * gnu/packages/algebra.scm (eigen): Update to 3.3.4. [source]: Use patch. Disable svd-preallocation test for BDCSVD. [arguments]: Set "EIGEN_SEED" environment variable in check phase. * gnu/local.mk (dist_patch_DATA): Add patch.
2017-12-14gnu: python-scikit-learn: Patch test non-determinism.Ben Woodcroft
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch: New file. * gnu/packages/machine-learning.scm (python-scikit-learn)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2017-12-10gnu: jemalloc: Fix tests for aarch64.Eric Bavier
* gnu/packages/patches/jemalloc-arm-address-bits.patch: New patch. * gnu/packages/jemalloc.scm (jemalloc)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2017-12-10gnu: t1lib: Change how patched CVEs are listed.Efraim Flashner
* gnu/packages/fontutils.scm (t1lib)[source]: Change patch name. [properties]: New field, register patched CVEs. * gnu/packages/patches/CVE-2011-1552+CVE-2011-1553+CVE-2011-1554.patch: Rename to CVE-2011-1552+.patch. * gnu/local.mk (dist_patch_DATA): Change patch name.
2017-12-10gnu: graphicsmagick: Update to 1.3.27.Marius Bakke
* gnu/packages/patches/graphicsmagick-CVE-2017-11403+CVE-2017-14103.patch, gnu/packages/patches/graphicsmagick-CVE-2017-12935.patch, gnu/packages/patches/graphicsmagick-CVE-2017-12936.patch, gnu/packages/patches/graphicsmagick-CVE-2017-12937.patch, gnu/packages/patches/graphicsmagick-CVE-2017-13775.patch, gnu/packages/patches/graphicsmagick-CVE-2017-13776+CVE-2017-13777.patch, gnu/packages/patches/graphicsmagick-CVE-2017-14042.patch, gnu/packages/patches/graphicsmagick-CVE-2017-14165.patch, gnu/packages/patches/graphicsmagick-CVE-2017-14649.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.27. [source](patches): Remove.
2017-12-10gnu: picprog: Fix non-Intel support.Efraim Flashner
* gnu/packages/patches/picprog-non-intel-support.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/embedded.scm (picprog)[source]: Add patch. [arguments]: Skip building the 'testport' binary.
2017-12-05gnu: libvirt: Update to 3.10.0.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (libvirt): Update to 3.10.0. [source]: Remove patches. * gnu/packages/patches/libvirt-CVE-2017-1000256.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-12-05gnu: Add clementine.Pierre Langlois
* gnu/packages/music.scm (clementine): New variable. * gnu/packages/patches/clementine-use-openssl.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-12-05gnu: Add libmygpo-qt.Pierre Langlois
* gnu/packages/music.scm (libmygpo-qt): New variable. * gnu/packages/patches/libmygpo-qt-fix-jsoncreatortest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-12-04gnu: spice: Update to 0.14.0.Andy Patterson
This is a follow-up to commit 9a187b39b7991463aa6985f5b746fccf69789525. * gnu/packages/spice.scm (spice): Update to 0.14.0. [source]: Remove obsolete patches. Use HTTPS URL. [inputs]: Add orc. [home-page]: Update to use https. * gnu/packages/patches/spice-CVE-2016-9577.patch, gnu/packages/patches/spice-CVE-2016-9578-1.patch, gnu/packages/patches/spice-CVE-2016-9578-2.patch, gnu/packages/patches/spice-CVE-2017-7506.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2017-12-04gnu: bazaar: Fix CVE-2017-14176.Leo Famulari
* gnu/packages/patches/bazaar-CVE-2017-14176.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/version-control.scm (bazaar)[source]: Use it.
2017-12-03gnu: shepherd: Avoid "Bad file descriptor" warnings.Ludovic Courtès
* gnu/packages/patches/shepherd-close-fds.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (shepherd)[source]: Use it.
2017-12-01gnu: glusterfs: Replace hardcoded FHS references.Ricardo Wurmus
* gnu/packages/patches/glusterfs-use-PATH-instead-of-hardcodes.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/file-systems.scm (glusterfs)[source]: Use it.
2017-11-30gnu: dtc: Fix build on 32 bits platforms.Mathieu Othacehe
* gnu/packages/bootloaders.scm (dtc)[patches]: Add dtc-32-bits-check.patch and dtc-format-modifier.patch to fix build and tests on 32 bits platforms. * gnu/packages/patches/dtc-32-bits-check.patch : New file. * gnu/packages/patches/dtc-format-modifier.patch : New file. * gnu/local.mk (dist_patch_DATA): Add two above patches.
2017-11-30gnu: exim: Update to 4.89.1.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (exim): Update to 4.89.1. [source]: Remove patches for fixed CVEs (all of them). * gnu/packages/patches/exim-CVE-2017-16943.patch: Delete file... * gnu/packages/patches/exim-CVE-2017-16944.patch: ...as well as this file... * gnu/packages/patches/exim-CVE-2017-1000369.patch: ...and this file. * gnu/local.mk (dist_patch_DATA): Remove all of them.
2017-11-29gnu: vpnc: Use newer vpnc-scripts.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (vpnc)[source]: Remove patch. [inputs]: Remove net-tools and iproute2. Add vpnc-scripts. [arguments]: Delete ‘configure’ and ‘wrap-vpnc-script’ #:phases. Add ‘use-store-paths’ phase. * gnu/packages/patches/vpnc-script.patch: Delete patch. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-11-29gnu: libxfont@2: Update replacement to 2.0.3 [fixes CVE-2017-16611].Marius Bakke
* gnu/packages/xorg.scm (libxfont2/fixed): Rename to ... (libxfont2-2.0.3): ... this. Make public. [version]: New field. [source]: Add URI and SHA256. Remove patches. (libxfont2)[replacement]: Change LIBXFONT2/FIXED to LIBXFONT2-2.0.3. * gnu/packages/patches/libxfont-CVE-2017-13720.patch, gnu/packages/patches/libxfont-CVE-2017-13722.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2017-11-29gnu: optipng: Fix CVE-2017-1000229.Marius Bakke
* gnu/packages/image.scm (optipng)[source](patches): New field. * gnu/packages/patches/optipng-CVE-2017-1000229.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2017-11-29gnu: libtorrent-rasterbar: Update to 1.1.4.Leo Famulari
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.4. [source]: Remove 'libtorrent-rasterbar-boost-compat.patch'. * gnu/packages/patches/libtorrent-rasterbar-boost-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-11-28gnu: exim: Fix CVE-2017-16944.Leo Famulari
* gnu/packages/patches/exim-CVE-2017-16944.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (exim)[source]: Use it.
2017-11-28gnu: qemu: Fix CVE-2017-{15118,15119}.Leo Famulari
* gnu/packages/patches/qemu-CVE-2017-15118.patch, gnu/packages/patches/qemu-CVE-2017-15119.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them.
2017-11-28gnu: perl-markdown-discount: Use a shorter patch file name.Ludovic Courtès
* gnu/packages/patches/perl-text-markdown-discount-use-system-markdown.patch: Rename to... * gnu/packages/patches/perl-text-markdown-discount-unbundle.patch: ... this. * gnu/packages/markup.scm (perl-text-markdown-discount): Adjust accordingly.
2017-11-28gnu: node: Update to 8.9.1.Mike Gerwitz
* gnu/packages/node.scm (node): Update to 8.9.1. [source]: Apply 'node-test-http2-server-rst-stream.patch'. [arguments]: Skip 'doc-only' target in 'check', which attempts to use npm to retrieve 'js-yaml' package. Remove test/doctool/test-make-doc.js. Do not remove now-missing test case. Remove new test case that fails in containers due to networking. * gnu/packages/patches/node-test-http2-server-rst-stream.patch: New file. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-26gnu: exim: Fix CVE-2017-16943.Leo Famulari
* gnu/packages/patches/exim-CVE-2017-16943.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (exim)[source]: Use it.
2017-11-25gnu: guile-emacs: Resurrect, fixes #29186.Jan Nieuwenhuizen
* gnu/packages/patches/guile-emacs-fix-configure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/emacs.scm (guile-emacs): Use it. Add workaround for src/deps dir creation. Fixes #29186.
2017-11-25gnu: Add emacs-highlight-stages.Oleg Pykhalov
* gnu/packages/emacs.scm (emacs-highlight-stages): New variable. * gnu/packages/patches/emacs-highlight-stages-add-gexp.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this.
2017-11-23gnu: supertuxkart: Update to 0.9.3.Rutger Helling
* gnu/packages/games.scm (supertuxkart): Update to 0.9.3. [arguments] <#:configure-flags>: Pass -DBUILD_RECORDER=0. * gnu/packages/patches/supertuxkart-angelscript-ftbfs.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-23gnu: higan: Update to 106.Rutger Helling
* gnu/packages/games.scm (higan): Update to 106. * gnu/packages/patches/higan-remove-march-native-flag.patch: Adjust. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-23gnu: pcmanfm: Fix CVE-2017-8934.Brendan Tildesley
* gnu/packages/patches/pcmanfm-CVE-2017-8934.patch: New file. This patch was imported from Arch Linux. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/lxde.scm (pcmanfm)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-21gnu: procmail: Fix CVE-2017-16844.Leo Famulari
* gnu/packages/patches/procmail-CVE-2017-16844.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mail.scm (procmail)[source]: Use it.
2017-11-20gnu: gcc@6: Respect SOURCE_DATE_EPOCH in __DATE__ and __TIME__ macros.Marius Bakke
* gnu/packages/patches/gcc-6-source-date-epoch-1.patch, gnu/packages/patches/gcc-6-source-date-epoch-2.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. * gnu/packages/gcc.scm (gcc-6)[source]: Use them.
2017-11-18gnu: owncloud-client: Don't check for updates.Efraim Flashner
* gnu/packages/sync.scm (owncloud-client)[source]: Add patch. * gnu/packages/patches/owncloud-disable-updatecheck.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2017-11-18gnu: audacity: Update to 2.2.0.Ricardo Wurmus
* gnu/packages/patches/audacity-build-with-system-portaudio.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/audio.scm (audacity): Update to 2.2.0. [source]: Add patch to build with system portaudio; add snippet to remove most bundled libraries. [inputs]: Replace "gtk+-2" with "gtk+", replace "wxwidgets-gtk2" with "wxwidgets"; remove "libsbsms"; add "suil" and "portmidi". [arguments]: Adjust configure flags to avoid using bundled libraries; remove phase "autoreconf"; add phases "fix-sbsms-check" and "use-upstream-headers".
2017-11-16gnu: icecat: Add more fixes from upstream mozilla-esr52.Mark H Weaver
Add fixes for CVE-2017-7830, the remaining 1/2 changesets for CVE-2017-7828, the remaining 1/19 changesets for CVE-2017-7826, and selected other fixes. * gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr52 repository. * gnu/packages/patches/icecat-bug-1348660-pt5.patch, gnu/packages/patches/icecat-bug-1415133.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2017-11-11gnu: mupdf: Actually fix CVE-2017-15587.Leo Famulari
The original fix could be removed by an optimizing compiler. * gnu/packages/patches/mupdf-CVE-2017-15587.patch: Revise patch.
2017-11-11gnu: libvisio: Update to 0.1.6.Marius Bakke
* gnu/packages/libreoffice.scm (libvisio): Update to 0.1.6. [source](patches): Remove. * gnu/packages/patches/libvisio-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-11-11gnu: libetonyek: Update to 0.1.7.Marius Bakke
* gnu/packages/libreoffice.scm (libetonyek): Update to 0.1.7. [source](patches): Remove. [arguments]<#:phases>: Remove. [native-inputs]: Remove AUTOCONF and AUTOMAKE. * gnu/packages/patches/libetonyek-build-with-mdds-1.2.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-11-10gnu: qemu: Fix CVE-2017-{15038,15268,15289}.Leo Famulari
* gnu/packages/patches/qemu-CVE-2017-15038.patch, gnu/packages/patches/qemu-CVE-2017-15268.patch, gnu/packages/patches/qemu-CVE-2017-15289.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them.
2017-11-07gnu: gcc-4.7: Resurrect building with gcc-5.4.0.Jan Nieuwenhuizen
* gnu/packages/patches/gcc-4-compile-with-gcc-5.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gcc.scm (gcc-4.7): Use it.
2017-11-07gnu: Add python-networkx2.Gábor Boskovits
* gnu/packages/python.scm (python-networkx2, python2-networkx2): New variables. * gnu/local.mk (dist_patch_DATA): Register 'python-networkx2-reproducible-build.patch'. * gnu/packages/patches/python-networkx2-reproducible-build.patch: New file. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-11-07gnu: Add PSM.Dave Love
* gnu/packages/linux.scm (psm): New variable. * gnu/packages/patches/psm-arch.patch, gnu/packages/patches/psm-ldflags.patch, gnu/packages/patches/psm-repro.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2017-11-05gnu: netsurf: Update to 3.7.Eric Bavier
For compatibility, dependents must be updated at the same time. * gnu/packages/web.scm (libcss): Update to 0.7.0 (nsgenbind): Update to 0.5. (netsurf): Update to 3.7. [arguments]: Fix binary name in .desktop. Adjust "docs" directory name. * gnu/packages/patches/netsurf-system-utf8proc.patch: Adjust to new source.
2017-11-05gnu: kde-frameworks: Update to 5.39.0.Hartmut Goebel
Beside simple updating: - ktexteditor: Add input. - kdelibs4support: Enable test kmimetypetest, disable test kuniqueapptest. - kimageformats: Make the plugins available for tests. - krunner: Make old tests pass again. Blacklist a failing new test. * gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, breeze-icons, extra-cmake-modules, kactivities, kactivities-stats, kapidox, karchive, kauth, kbookmarks, kcmutils, kcodecs, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdbusaddons, kdeclarative, kded, kde-frameworkintegration, kdelibs4support, kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons, kfilemetadata, kglobalaccel, kguiaddons, khtml, ki18n, kiconthemes, kidletime, kimageformats, kinit, kio, kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer, knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople, kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting, ktextwidgets, kunitconversion, kwallet, kwayland, kwidgetsaddons, kwindowsystem, kxmlgui, kxmlrpcclient, modemmanager-qt, networkmanager-qt, oxygen-icons, plasma-framework, prison, solid, sonnet, threadweaver): Update to 5.39.0 (ktexteditor) Update to 5.39.0. [source]: Add patch. [inputs]: Add qtdeclarative. (kdelibs4support): Update to 5.39.0. [#:phase check-post-install]: Remove kmimetypetest from and add kuniqueapptest to list of test to be excluded when running ctest. (kimageformats): Update to 5.39.0. [#:phase check-setup] Make the plugins available for tests. * gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2017-11-02gnu: Add java-powermock-reflect.Julien Lepiller
* gnu/packages/java.scm (java-powermock-reflect): New variable. * gnu/packages/patches/java-powermock-fix-java-files.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-10-27gnu: exiv2: Add upstream security fixes.Marius Bakke
Fixes CVE-2017-14859, CVE-2017-14860, CVE-2017-14862 and CVE-2017-14864. * gnu/packages/patches/exiv2-CVE-2017-14859-14862-14864.patch, gnu/packages/patches/exiv2-CVE-2017-14860.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. * gnu/packages/image.scm (exiv2)[source]: Use them.
2017-10-26gnu: wget: Update to 1.19.2 [fixes CVE-2017-13089 and CVE-2017-13090].Marius Bakke
* gnu/packages/wget.scm (wget): Update to 1.19.2. [source](uri): Change to '.lz' tarball. [source](patches): Remove. [native-inputs]: Add LZIP. * gnu/packages/patches/wget-CVE-2017-6508.patch, gnu/packages/patches/wget-fix-504-test-timeout.patch, gnu/packages/patches/wget-perl-5.26.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2017-10-25gnu: Add crypto++.Pierre Langlois
* gnu/packages/crypto.scm (crypto++): New variable. * gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24gnu: mupdf: Fix CVE-2017-{14685,14686,14687}.Leo Famulari
* gnu/packages/patches/mupdf-CVE-2017-14685.patch, gnu/packages/patches/mupdf-CVE-2017-14686.patch, gnu/packages/patches/mupdf-CVE-2017-14687.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/pdf.scm (mupdf)[source]: Use them.
2017-10-24gnu: icu4c: Fix CVE-2017-14952.Leo Famulari
* gnu/packages/patches/icu4c-CVE-2017-14952.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/icu4c.scm (icu4c)[replacement]: New field. (icu4c-fixed): New variable.
2017-10-22gnu: glibc: Fix CVE-2017-15670, CVE-2017-15671.Marius Bakke
* gnu/packages/patches/glibc-CVE-2017-15670-15671.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/base.scm (glibc/linux)[replacement]: New field. (glibc/fixed): New variable. (glibc-2.24, glibc-2.23, glibc-2.22)[source](patches): Add 'glibc-CVE-2017-15670-15671.patch'.
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