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2019-01-25gnu: Add Combinatorial BLAS.Eric Bavier
* gnu/packages/maths.scm (combinatorial-blas): New variable. * gnu/packages/patches/combinatorial-blas-awpm.patch, gnu/packages/patches/combinatorial-blas-io-fix.patch: New files * gnu/local.mk(dist_patch_DATA): Add them.
2019-01-25Merge branch 'master' into stagingRicardo Wurmus
2019-01-23gnu: gnucash: Disable the stress-options-test using a phase.Maxim Cournoyer
The qof test is also reinstated; it was failing because the needed locales were not installed. * gnu/packages/patches/gnucash-disable-failing-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/gnucash.scm (gnucash)[patches]: Remove it. [phases]{disable-stress-options-test}: Implement it using SUBSTITUTES*. {install-locales}: New phase.
2019-01-23gnu: gnucash: Convert price-quotes-perl patch to a phase.Maxim Cournoyer
* gnu/packages/patches/gnucash-price-quotes-perl.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/gnucash.scm (gnucash)[patches]: Remove it. [phases]{fix-finance-quote-check}: Implement it using SUBSTITUTES*.
2019-01-21gnu: python-pyqt: Update to 5.11.3.Efraim Flashner
* gnu/packages/qt.scm (python-pyqt): Update to 5.11.3. * gnu/packages/patches/pyqt-public-sip: Update patch.
2019-01-21gnu: qt: Update to 5.11.3.Efraim Flashner
* gnu/packages/qt.scm (qt, qtbase, qtsvg, qtimageformats, qtx11extras, qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors, qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel qtwebglplugin, qtwebview, qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtscxml, qtgamepad, qtpurchasing, qtcanvas3d, qtcharts, qtdatavis3d, qtnetworkauth, qtremoteobjects, qtspeech): Update to 5.11.3. (qt)[source]: Remove patch. * gnu/packages/patches/qt-5-renameat2.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-20Merge branch 'master' into stagingLudovic Courtès
2019-01-17gnu: OpenSSH: Fix CVE-2018-20685.Leo Famulari
* gnu/packages/patches/openssh-CVE-2018-20685.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ssh.scm (openssh)[source]: Use it.
2019-01-17gnu: kmscon: Add runtime keymap update support.Mathieu Othacehe
* gnu/packages/patches/kmscon-runtime-keymap-switch.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/terminals.scm (kmscon)[source]: Add patch.
2019-01-16gnu: kodi: Skip failing test.Efraim Flashner
* gnu/packages/kodi.scm (kodi)[source]: Add patch. * gnu/packages/patches/kodi-skip-test-449.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2019-01-14gnu: libssh: Update to 0.8.6.Ludovic Courtès
* gnu/packages/patches/libssh-hostname-parser-bug.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ssh.scm (libssh): Update to 0.8.6. [source](patches): Remove. [arguments]: Add #:phases. (guile-ssh)[source](modules, snippet]: New fields.
2019-01-14gnu: opencv: Loosen test suite failures.Efraim Flashner
* gnu/packages/image-processing.scm (opencv)[native-inputs]: Add patch to opencv-contrib. [arguments]: Update 'unpack-submodule-sources phase. * gnu/packages/patches/opencv-rgbd-aarch64-test-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2019-01-13Merge branch 'master' into stagingMarius Bakke
2019-01-11gnu: kinit: Use KDEINIT5_LIBRARY_PATH to search for dynlibs.Hartmut Goebel
Using LIBRARY_PATH was introduced in 16b8aff85bcdb9799496c4a27257210cd45158e5, but is wrong since this variable is used by the compiler (gcc) at link time. * gnu/packages/patches/kinit-kdeinit-libpath.patch: Change LIBRARY_PATH to KDEINIT5_LIBRARY_PATH. * gnu/packages/kde-frameworks.scm (kinit)[native-search-paths]: New field.
2019-01-10gnu: Add docker.Danny Milosavljevic
* gnu/packages/docker.scm (docker): New variable. * gnu/packages/patches/docker-engine-test-noinstall.patch: New file. * gnu/packages/patches/docker-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add them.
2019-01-09gnu: aria2: Fix CVE-2019-3500.Leo Famulari
* gnu/packages/patches/aria2-CVE-2019-3500.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bittorrent.scm (aria2)[source]: Use it.
2019-01-09Merge remote-tracking branch 'origin/master' into stagingEfraim Flashner
2019-01-07gnu: biber: Update to 2.12.Jelle Licht
* gnu/packages/tex.scm (biber): Update to 2.12. [source]: Use 'git-fetch'. Add patch. [inputs]: Add perl-file-slurper. Remove perl-file-slurp. * gnu/packages/patches/biber-fix-encoding-write.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2019-01-07gnu: libarchive: Replace with libarchive 3.3.3 and fix ↵Alex Vong
CVE-2018-{1000877,1000878,1000880}. * gnu/packages/backup.scm (libarchive)[source, home-page]: Use HTTPS. [replacement]: New field. (libarchive-3.3.3): New variable. * gnu/packages/patches/libarchive-CVE-2018-1000877.patch, gnu/packages/patches/libarchive-CVE-2018-1000878.patch, gnu/packages/patches/libarchive-CVE-2018-1000880.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2019-01-06gnu: unrtf: Update to 0.21.10.Efraim Flashner
* gnu/packages/unrtf.scm (unrtf): Update to 0.21.10. [source]: Remove patch, remove snippet. [license]: Update to gpl3+. * gnu/packages/patches/unrtf-CVE-2016-10091.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-05gnu: streamlink: Fix build.Efraim Flashner
* gnu/packages/video.scm (streamlink)[source]: Add patch. * gnu/packages/patches/streamlink-update-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2019-01-04gnu: kpackage: Transfer patches from NixOS.Hartmut Goebel
Transfer the NixOS patches for kpackage as of 2018-02-17: - Allow external paths. - Make QDirIterator follow symlinks. Decided to use a patch for one of the "allow external paths" changes since 'substitute*' seems not to be robust enough. * gnu/packages/patches/kpackage-allow-external-paths.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm(kpackage)[source]: Use it. <patch>: New phase.
2019-01-04gnu: kinit: Use LIBRARY_PATH to search for dynamically loaded libs.Hartmut Goebel
Transfer the NixOS "kdeinit-libpath" patch for kinit as of 2018-02-17. * gnu/packages/patches/kinit-kdeinit-libpath.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
2019-01-04gnu: kinit: Use the store paths for dynamically loaded libs.Hartmut Goebel
Transfer the NixOS "kdeinit-extra_libs" patch for kinit as of 2018-02-17. * gnu/packages/patches/kinit-kdeinit-extra_libs.patch: New filee. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm (kinit)[source]: Use it. <patch-paths>: New phase. [inputs]: Add kparts, plasma-framework.
2019-01-04gnu: kio: Search 'smbd' on $PATH.Hartmut Goebel
Transfer the remaining NixOS patch for kio as of 2018-02-17. * gnu/packages/patches/kio-search-smbd-on-PATH.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde-frameworks.scm(kio)<source>: Use it.
2019-01-04gnu: libextractor: Fix CVE-2018-{20430,20431}.Alex Vong
* gnu/packages/patches/libextractor-CVE-2018-20430.patch, gnu/packages/patches/libextractor-CVE-2018-20431.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gnunet.scm (libextractor)[source]: Use them.
2019-01-03gnu: vboot-utils: Fix building on armhf-linux.Kei Kebreau
* gnu/packages/bootloaders.scm (vboot-utils)[source]: Add patches. [arguments]: Conditionally add "HOST_ARCH=arm" to #:make-flags. * gnu/packages/patches/vboot-utils-fix-format-load-address.patch, gnu/packages/patches/vboot-utils-fix-tests-show-contents.patch, gnu/packages/patches/vboot-utils-skip-test-workbuf.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2019-01-02gnu: gnucash: Fix test failure.Maxim Cournoyer
Fixes issue #32057 (see: https://issues.guix.info/issue/32057). * gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnucash.scm (gnucash): Use it.
2019-01-02gnu: owncloud-client: Update to 2.5.1.10973.Efraim Flashner
* gnu/packages/sync.scm (owncloud-client): Update to 2.5.1.10973. * gnu/packages/patches/owncloud-disable-updatecheck.patch: Update patch.
2019-01-01gnu: allegro@5.0: Fix building with newer mesa.Efraim Flashner
* gnu/packages/game-development.scm (allegro@5.0)[source]: Add patch. (allegro)[patch]: Rename patch file. * gnu/packages/patches/allegro-fix-compiliation-mesa-18.2.5-and-later.patch: Rename to gnu/packages/patches/allegro-mesa-18.2.5-and-later.patch. * gnu/local.mk (dist_patch_DATA): Register it.
2019-01-01gnu: allegro@4: Fix building with newer mesa.Efraim Flashner
* gnu/packages/game-development.scm (allegro@4)[source]: Add patch. * gnu/packages/patches/allegro4-mesa-18.2.5-and-later.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-31gnu: wesnoth: Fix building with newer boost.Efraim Flashner
* gnu/packages/games.scm (wesnoth)[source]: Add patch. * gnu/packages/patches/wenoth-newer-boost.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-30gnu: vinagre: Update package for newer freerdp.Efraim Flashner
* gnu/packages/gnome.scm (vinagre)[source]: Update patches. [arguments]: Add custom phase to replace 'freerdp' with 'freerdp2'. Remove configure flags. * gnu/packages/patches/vinagre-revert-1.patch, gnu/packages/patches/vinagre-revert-2.patch: Remove files. * gnu/packages/patches/vinagre-newer-freerdp.patch, gnu/packages/patches/vinagre-newer-rdp-parameters.patch: New files. * gnu/local.mk (dist_patch_DATA): Register changes.
2018-12-30gnu: fbreader: Fix building with newer curl.Efraim Flashner
* gnu/packages/ebook.scm (fbreader)[source]: Add patch. * gnu/packages/patches/fbreader-curl-7.62.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-27gnu: glib-networking: Work around test failure.Efraim Flashner
* gnu/packages/gnome.scm (glib-networking)[source]: Add patch. * gnu/packages/patches/glib-networking-connection.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-26Merge branch 'master' into stagingMarius Bakke
2018-12-26gnu: efl: Fix build on 32-bit architectures.Marius Bakke
* gnu/packages/patches/efl-mesa-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/enlightenment.scm (efl)[source](patches): Use it.
2018-12-26gnu: sssd: Fix build with cURL >= 7.62.0.Marius Bakke
* gnu/packages/patches/sssd-curl-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/sssd.scm (sssd)[source](patches): Use it.
2018-12-24gnu: file: Fix CVE-2018-10360.Efraim Flashner
* gnu/packages/patches/file-CVE-2018-10360.patch: New file. * gnu/packages/file.scm (file)[replacement]: New field. (file/fixed): New variable. * gnu/packages/commencement.scm (file-boot0): Use 'package/inherit' to receive security fixes. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-23gnu: zathura: Update to 0.4.3.Marius Bakke
* gnu/packages/patches/zathura-plugindir-environment-variable.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/pdf.scm (zathura): Update to 0.4.3. [source](patches): Remove. [native-search-paths]: Adjust for upstreamed patch.
2018-12-23Merge branch 'master' into stagingMarius Bakke
2018-12-23gnu: pingus: Fix building.Efraim Flashner
* gnu/packages/games.scm (pingus)[source]: Use 'git-fetch'. Add patch to update used boost headers. * gnu/packages/patches/pingus-boost-headers.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-23gnu: datamash: Update to 1.4.Efraim Flashner
* gnu/packages/datamash.scm (datamash): Update to 1.4. [source]: Remove patch. * gnu/packages/patches/datamash-arm-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-12-22Merge branch 'master' into stagingMarius Bakke
2018-12-21gnu: Add emacs-wordnut.Mathieu Othacehe
* gnu/packages/patches/emacs-wordnut-require-adaptive-wrap.patch: New file. * gnu/local.mk (dist_patch_DATA): Add previous file. * gnu/packages/emacs.scm (emacs-wordnut): New package.
2018-12-20gnu: meandmyshadow: Update to 10.5a.Kei Kebreau
* gnu/packages/games.scm (meandmyshadow): Update to 10.5a. [source]: Remove patch. * gnu/local.mk (dist_patch_DATA): Unregister patch. * gnu/packages/patches/meandmyshadow-define-paths-earlier.patch: Delete file.
2018-12-19gnu: stumpwm: Fix gnew command.Pierre Langlois
The new release of StumpWM broken the interactive 'gnew' command. It was fixed upstream [0] and will be part of the next release. 0: https://github.com/stumpwm/stumpwm/pull/538 * gnu/packages/patches/stumpwm-fix-broken-read-one-line.patch: New file. * gnu/packages/lisp.scm (stumpwm)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Register it.
2018-12-18gnu: ansible: Work around issues with Guix wrapper scripts.Arun Isaac
* gnu/packages/admin.scm (ansible)[source]: Remove ansible-wrap-program-hack.patch from patches. [arguments]: Add hide-wrapping and fix-symlinks phases. * gnu/packages/patches/ansible-wrap-program-hack.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it.
2018-12-16gnu: glibc: Add patch implementing "pid/…" magic lookup on the Hurd.Ludovic Courtès
This patch is missing from glibc 2.28 and is needed to support /proc/self lookup when using the Hurd's procfs, which in turn is needed for our 'guile-relocatable.patch'. See <https://lists.gnu.org/archive/html/bug-hurd/2018-12/msg00024.html>. * gnu/packages/patches/glibc-hurd-magic-pid.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (glibc)[arguments]: Add 'apply-hurd-patch' phase. [native-inputs]: Add "hurd-magic-pid-patch" input. * gnu/packages/cross-base.scm (cross-libc)[arguments]: Duplicate 'apply-hurd-patch' phase.
2018-12-13gnu: qemu: Update to 3.1.0.Rutger Helling
* gnu/packages/virtualization.scm (qemu): Update to 3.1.0. [source]: Remove obsolete patches. * gnu/packages/patches/qemu-CVE-2018-16847.patch, gnu/packages/patches/qemu-CVE-2018-16867.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
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