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2020-08-29gnu: Add fpc....* gnu/packages/pascal.scm: New file. * gnu/packages/patches/fpc-reproducibility.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add pascal.scm. (dist_patch_DATA): Register patch. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Kei Kebreau
2020-08-28gnu: emacs: Update to 27.1....* gnu/packages/emacs.scm (emacs): Update to 27.1. [source]: In snippet, use 'find-files' to find 'eshell/esh-groups.el' if it exists, but gracefully handle its absence. [arguments]: Add "--with-cairo" to configure-flags. Add 'restore-emacs-pdmp' and 'make-compressed-files-writable' phases. Explicitly return #t from 'install-site-start' phase. [inputs]: Add cairo, pango, harfbuzz, jansson, and gmp. Remove imagemagick. (emacs-next): Remove variable. (emacs-minimal, emacs-xwidgets): Use 'package/inherit'. [arguments]: Remove 'restore-emacs-pdmp' phase. (emacs-no-x): Use 'package/inherit'. [arguments]: Remove "--with-cairo" from configure-flags. Remove 'restore-emacs-pdmp' phase. [inputs]: Remove cairo, pango, and harfbuzz. (emacs-no-x-toolkit): Use 'package/inherit'. [arguments]: Remove 'restore-emacs-pdmp' phase. Remove superfluous quasiquote+unquote-splicing pair. (emacs-wide-int): Use 'package/inherit'. (guile-emacs): Use 'package/inherit'. [arguments]: Remove "--with-cairo" from configure-flags. Remove 'restore-emacs-pdmp' phase. * gnu/packages/patches/emacs-ignore-empty-xim-styles.patch, gnu/packages/patches/emacs-source-date-epoch.patch: Adapt to apply cleanly to emacs-27.1. * gnu/packages/patches/emacs-exec-path.patch: Replace with the previous contents of 'emacs27-exec-path.patch', but remove the superfluous comment about it being "like emacs-exec-path.patch, but for Emacs 27". * gnu/packages/patches/emacs27-exec-path.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove 'emacs27-exec-path.patch'. Mark H Weaver
2020-08-27gnu: sssd: Pass '--localstatedir=/var' and '--sysconfdir=/etc'....This ensures notably that libnss_sss looks for the mmap cache files in the right place, /var/lib/sss/mc, rather than in the store. * gnu/packages/patches/sssd-system-directories.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/sssd.scm (sssd)[source]: Use it. [arguments]: Pass "--localstatedir" and "--sysconfdir". Ludovic Courtès
2020-08-27gnu: vcflib: Use shared libraries....* gnu/packages/bioinformatics.scm (vcflib)[source]: Add patch. Add snippet to adjust files for new locations. [inputs]: Add fastahack, smithwaterman, tabixpp, xz. [native-inputs]: Add pkg-config. Remove the package-source of fastahack, fsom, smithwaterman, tabixpp. [arguments]: Remove make-flags. Add custom phase to add the output lib directory to the rpath. Adjust custom 'unpack-submodule-sources for the change in native-inputs. Adjust custom 'install phase to also install libraries and headers. * gnu/packages/patches/vcflib-use-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2020-08-27gnu: xorg-server: Update replacement to 1.20.9 [security-fixes]....Includes fixes for CVE-2020-1436, CVE-2020-14345, CVE-2020-14346, and CVE-2020-14361. * gnu/packages/xorg.scm (xorg-server/fixed): Update to 1.20.9. * gnu/packages/patches/xorg-server-CVE-2020-14347.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Mark H Weaver
2020-08-25gnu: icecat: Update to 68.12.0-guix0-preview1 [security fixes]....Includes fixes for CVE-2020-15663, CVE-2020-15664, and CVE-2020-15669. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version. Mark H Weaver
2020-08-20gnu: libmhash: Fix use-after-free in tests....* gnu/packages/patches/libmhash-hmac-fix-uaf.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/mcrypt.scm (libmhash)[source]: Use it. Eric Bavier
2020-08-19gnu: unknown-horizons: Fix build with python@3.8 and python-pytest@5....* gnu/packages/games.scm (unknown-horizons)[source]: Add patch. [arguments]: Add a ‘fix-tests-with-pytest>=4’ phase. [native-inputs]: Add python-distro. * gnu/packages/patches/unknown-horizons-python-3.8-distro.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2020-08-19gnu: xf86-video-geode: Remove unnecessary patch....* gnu/packages/xorg.scm (xf86-video-geode)[source]: Remove patch. * gnu/packages/patches/xf86-video-geode-glibc-2.20.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-08-19gnu: Add transcode....* gnu/packages/video.scm (transcode): New variable. * gnu/packages/patches/transcode-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add liblouisutdml....* gnu/packages/language.scm (liblouisutdml): New variable. * gnu/packages/patches/liblouisutdml-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add ldns....* gnu/packages/dns.scm (ldns): New variable. * gnu/packages/patches/ldns-drill-examples.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add seed....* gnu/packages/gnome.scm (seed): New variable. * gnu/packages/patches/seed-webkit.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add dee....* gnu/packages/gnome.scm (dee): New variable. * gnu/packages/patches/dee-vapi.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add opensles....* gnu/packages/audio.scm (opensles): New variable. * gnu/packages/patches/opensles-add-license-file.patch: New file. * gnu/local.mk (opensles-add-license-file.patch): New reference. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add libofa....* gnu/packages/audio.scm (libofa): New variable. * gnu/packages/patches/libofa-ftbfs-1.diff: New file. * gnu/packages/patches/libofa-curl.diff: New file. * gnu/packages/patches/libofa-ftbfs-2.diff: New file. * gnu/local.mk (dist_patch_DATA): Add them. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-18gnu: Add libquicktime....* gnu/packages/video.scm (libquicktime): New variable. * gnu/packages/patches/libquicktime-ffmpeg.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Raghav Gururajan
2020-08-16gnu: webkitgtk: Expose all font locations to the bubblewrap sandbox....Fixes <https://issues.guix.gnu.org/41174> and <https://issues.guix.gnu.org/42618>. The webkitgtk library relied on by Epiphany and others uses bubblewrap to sandbox its process. This sandbox was only exposing fonts relative to XDG_DATA_HOME. Extend it so that it honors font locations specified via XDG_DATA_DIRS as well, which is what Guix uses. * gnu/packages/patches/webkitgtk-bind-all-fonts.patch: Add patch. * gnu/local.mk: Register it. * gnu/packages/webkit.scm (webkitgtk)[source]<patches>: Use it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Leo Prikler
2020-08-16gnu: ola: Build with libmicrohttpd 0.9.71....* gnu/packages/lighting.scm (ola)[source]: Update to 0.10.7-0.5d88293. [source]: Use GIT-FETCH & GIT-FILE-NAME. Remove patch. [native-inputs]: Add autoconf, automake, and libtool. * gnu/packages/patches/ola-readdir-r.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-08-16gnu: Add dbxfs....* gnu/packages/file-systems.scm (dbxfs): New variable. * gnu/packages/patches/dbxfs-remove-sentry-sdk.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2020-08-15gnu: gvfs: Fix build with libplist 2.2.0....* gnu/packages/gnome.scm (gvfs)[source]: Add patch. * gnu/packages/patches/gvfs-add-support-for-libplist-2.2.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Kei Kebreau
2020-08-13gnu: opencv: Fix build with Jasper 2.0.19....* gnu/packages/image-processing.scm (opencv)[source]: Add patch. * gnu/packages/patches/opencv-fix-build-of-grfmt_jpeg2000.cpp.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2020-08-12gnu: freedink-engine: Fix SDL hints....* gnu/packages/games.scm: freedink: [patches]: Add fix. * gnu/packages/patches/freedink-engine-fix-sdl-hints.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Jesse Gibbons
2020-08-11gnu: clang-runtime-3.5: Fix build....* gnu/packages/patches/clang-runtime-3.5-libsanitizer-mode-field.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/llvm.scm (clang-runtime-3.5): Add patch. Ricardo Wurmus
2020-08-09gnu: python-alembic: Update to 1.4.2....* gnu/packages/databases.scm (python-alembic): Update to 1.4.2. [source]: Remove patch. * gnu/packages/patches/python-alembic-exceptions-cause.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-08-08gnu: lib2geom: Update to commit 17e0d21f....* gnu/packages/patches/lib2geom-enable-assertions.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/graphics.scm (lib2geom): Update to commit 17e0d21f0afc8489656f9184bff7ad024a42394a, and remove obsolete patch. Maxim Cournoyer
2020-08-06gnu: json-c: Fix CVE-2020-12762....* gnu/packages/web.scm (json-c)[replacement]: New field. (json-c-0.13, json-c-0.12)[source]: Add patch. (json-c/fixed): New variable. * gnu/packages/patches/json-c-CVE-2020-12762.patch, gnu/packages/patches/json-c--0.13-CVE-2020-12762.patch, gnu/packages/patches/json-c--0.12-CVE-2020-12762.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. Efraim Flashner
2020-08-05gnu: pjproject: Update the pkg-config patch....* gnu/packages/patches/pjproject-fix-pkg-config-ldflags.patch: Update patch. Maxim Cournoyer
2020-08-03gnu: pjproject: Fix problem in pkg-config file....* gnu/packages/patches/pjproject-correct-the-cflags-field.patch: Add patch. * gnu/packages/patches/pjproject-fix-pkg-config-ldflags.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Register the new patches. * gnu/packages/telephony.scm (pjproject): Use them. * gnu/packages/jami.scm (pjproject-jami): Remove a patch from pjproject-jami that is already applied against pjproject. Maxim Cournoyer
2020-08-03gnu: emacs: Ignore empty XIM styles....As of libx11 version 1.6.10, xim may be NULL, which causes a segmentation fault in the execution of ARRAYELTS. As a cautionary measure, we short-circuit this logic. * gnu/packages/patches/emacs-ignore-empty-xim-styles.patch: New file. * gnu/packages/emacs.scm (emacs emacs-next)[patches]: Use it. * gnu/local.mk: Register it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Leo Prikler
2020-08-03gnu: Add python-onnx....* gnu/packages/machine-learning.scm (python-onnx): New variable. * gnu/packages/patches/python-onnx-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Vinicius Monego
2020-08-01gnu: Add Remake....* gnu/packages/debug.scm (remake): New variable. * gnu/packages/patches/remake-impure-dirs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Eric Bavier
2020-08-01gnu: xorg-server: Fix CVE-2020-14347 via graft....* gnu/packages/patches/xorg-server-CVE-2020-14347.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xorg-server/fixed): New variable. (xorg-server)[replacement]: New field. (xorg-server-wayland): Use package/inherit. Mark H Weaver
2020-07-31gnu: Add blender@2.79b....Restore blender@2.79b, the last version that does not require OpenGL 3, and therefore the last version to work on many older computers. Note that this commit relies on blender-2.79-newer-ffmpeg.patch and blender-2.79-python-3.7-fix.patch, which were left in the tree when blender@2.79b was previously removed in commit 1f14453eedfede4626a78321c66a009c9997bee4. * gnu/packages/patches/blender-2.79-gcc8.patch, gnu/packages/patches/blender-2.79-gcc9.patch, gnu/packages/patches/blender-2.79-oiio2.patch, gnu/packages/patches/blender-2.79-python-3.8-fix.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/graphics.scm (blender-2.79): New variable. Mark H Weaver
2020-07-31gnu: Add bpftrace....* gnu/packages/linux.scm (bpftrace): New variable. * gnu/packages/patches/bpftrace-disable-bfd-disasm.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> John Soo
2020-07-30gnu: python-slugify: Update to 4.0.1....* gnu/packages/patches/python-slugify-depend-on-unidecode.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python-web.scm (python-slugify): Update to 4.0.1. [source] Drop patch. Signed-off-by: Marius Bakke <marius@gnu.org> Tanguy Le Carrour
2020-07-30gnu: Add nfs4-acl-tools....* gnu/packages/nfs.scm (nfs4-acl-tools): New variable. * gnu/packages/patches/nfs4-acl-tools-0.3.7-fixpaths.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Marius Bakke <marius@gnu.org> Lars-Dominik Braun
2020-07-29gnu: sphinxbase: Fix building....* gnu/packages/speech.scm (sphinxbase)[source]: Add patch. * gnu/packages/patches/sphinxbase-fix-doxygen.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2020-07-29gnu: Add rnp....* gnu/packages/openpgp.scm (rnp): New variable. * gnu/packages/patches/rnp-add-version.cmake.patch: New file. * gnu/packages/patches/rnp-disable-ruby-rnp-tests.patch: New file. * gnu/packages/patches/rnp-unbundle-googletest.patch: New file. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Justus Winter
2020-07-29gnu: libextractor: Update to 1.10....* gnu/packages/gnunet.scm (libextractor): Update to 1.10. [arguments]: Add 'fix-exiv2-tests' phase. [inputs]: Add GIFLIB, remove TIDY-HTML. * gnu/packages/patches/libextractor-exiv2.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Michael Rohleder
2020-07-28gnu: icecat: Update to 68.11.0-guix0-preview1 [security-fixes]....Includes fixes for CVE-2020-6463, CVE-2020-6514, CVE-2020-15652, and CVE-2020-15659. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. * gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version. Mark H Weaver
2020-07-28gnu: lib2geom: Fix more tests....There were still two tests failing on aarch64-linux: 1. rotated-rect-test, 2. ellipse-test. The first one was removed along with the RotatedRect class in latest upstream, while the second one is yet numerical accuracy related. It gets fixed by updating the already existing 'lib2geom-fix-tests' patch. * gnu/packages/graphics.scm (lib2geom): Bump revision to "2", and update commit hash to the latest one available. * gnu/packages/patches/lib2geom-fix-tests.patch: Update patch. Maxim Cournoyer
2020-07-27gnu: plotutils: Fix build on non-x86_64 architectures....* gnu/packages/patches/plotutils-spline-test.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/plotutils.scm (plotutils)[patches]: Apply it. Maxim Cournoyer
2020-07-27gnu: python-jedi: Update to 0.17.2....* gnu/packages/python-xyz.scm (python-jedi): Update to 0.17.2. [source, arguments]: Remove upstreamed patching. * gnu/packages/patches/python-jedi-sort-project-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2020-07-26gnu: glibc: Remove old versions....* gnu/packages/patches/glibc-CVE-2015-5180.patch, gnu/packages/patches/glibc-CVE-2015-7547.patch, gnu/packages/patches/glibc-CVE-2016-3075.patch, gnu/packages/patches/glibc-CVE-2016-3706.patch, gnu/packages/patches/glibc-CVE-2016-4429.patch, gnu/packages/patches/glibc-CVE-2017-1000366-pt1.patch, gnu/packages/patches/glibc-CVE-2017-1000366-pt2.patch, gnu/packages/patches/glibc-CVE-2017-1000366-pt3.patch, gnu/packages/patches/glibc-o-largefile.patch, gnu/packages/patches/glibc-vectorized-strcspn-guards.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/base.scm (glibc-2.26, glibc-2.25, glibc-2.24, glibc-2.23, glibc-2.22): Remove variables. Marius Bakke
2020-07-24gnu: luminance-hdr: Update to 2.6.0....* gnu/packages/patches/luminance-hdr-qt-printer.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/image-viewers.scm (luminance-hdr): Update to 2.6.0. [inputs]: Add QTSVG and EIGEN. [arguments]: Add #:tests? #f. Marius Bakke
2020-07-23gnu: Fix Krita....Fixes <https://bugs.gnu.org/42476>. Reported by linka on #guix. * gnu/packages/patches/qtbase-fix-krita-deadlock.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/qt.scm (qtbase-for-krita): New variable. * gnu/packages/kde.scm (krita)[inputs]: Replace qtbase with qtbase-for-krita. Leo Famulari
2020-07-23Revert "gnu: Fix Krita."...This reverts commit 5f63905096e456097fca206f56ce9257f72faf64. This commit caused `guix pull` to crash like this: ------ Backtrace: In ice-9/boot-9.scm: 222:29 19 (map1 _) 222:29 18 (map1 _) 222:29 17 (map1 _) 222:29 16 (map1 _) 222:17 15 (map1 (((gnu packages kde)) ((gnu packages libevent)) ((gnu packages libidn)) ((gnu packages #)) ((?)) ?)) 3297:17 14 (resolve-interface (gnu packages kde) #:select _ #:hide _ #:prefix _ #:renamer _ #:version _) In ice-9/threads.scm: 390:8 13 (_ _) In ice-9/boot-9.scm: 3223:13 12 (_) In ice-9/threads.scm: 390:8 11 (_ _) In ice-9/boot-9.scm: 3507:20 10 (_) 2806:4 9 (save-module-excursion _) 3527:26 8 (_) In unknown file: 7 (primitive-load-path "gnu/packages/kde" #<procedure 7f68d6fe5da0 at ice-9/boot-9.scm:3514:37 ()>) In ice-9/eval.scm: 626:19 6 (_ #<directory (gnu packages kde) 7f68d6175b40>) 293:34 5 (_ #<directory (gnu packages kde) 7f68d6175b40>) 173:47 4 (_ #(#<directory (gnu packages kde) 7f68d6175b40> #<promise #<procedure 7f68dc5a5d00 at ice-9/eval.sc?>)) 159:9 3 (_ #(#<directory (gnu packages kde) 7f68d6175b40> #<promise #<procedure 7f68dc5a5d00 at ice-9/eval.sc?>)) 191:35 2 (_ #(#<directory (gnu packages kde) 7f68d6175b40> #<promise #<procedure 7f68dc5a5d00 at ice-9/eval.sc?>)) 223:20 1 (proc #(#<directory (gnu packages kde) 7f68d6175b40> #<promise #<procedure 7f68dc5a5d00 at ice-9/eval?>)) In unknown file: 0 (%resolve-variable (7 . qtbase) #<directory (gnu packages kde) 7f68d6175b40>) ERROR: In procedure %resolve-variable: error: qtbase: unbound variable ------ Leo Famulari
2020-07-23gnu: Fix Krita....Fixes <https://bugs.gnu.org/42476>. Reported by linka on #guix. * gnu/packages/patches/qtbase-fix-krita-deadlock.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kde.scm (qtbase-for-krita): New variable. (krita)[inputs]: Replace qtbase with qtbase-for-krita. Leo Famulari
2020-07-23gnu: linux-libre@4.14: Update to 4.14.189....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.189. (linux-libre-4.14-pristine-source): Update hash. (linux-libre-4.14-source): Remove %linux-libre-fix-atheros-9271-patch. (deblob-scripts-4.14): Update to 4.14.189. (%linux-libre-fix-atheros-9271-patch): Delete variable. * gnu/packages/patches/linux-libre-fix-atheros-9271.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Mark H Weaver
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