| Age | Commit message (Expand) | Author |
|---|
| 2017-03-30 | gnu: Use HTTPS for almost all gnu.org HOME-PAGEs.•••All HTTP gnu.org (and supported subdomain) HOME-PAGEs changed to HTTPS.
| Tobias Geerinckx-Rice |
| 2017-03-20 | gnu: Add r-cairo.•••* gnu/packages/statistics.scm (r-cairo): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-minimal: Fix remaining reproducibility problems.•••Fixes <https://bugs.gnu.org/25598>.
* gnu/packages/statistics.scm (r-minimal)[arguments]: Add remaining
reproducibility fixes to "build-reproducibly" phase.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r: Rename to r-minimal.•••* gnu/packages/statistics.scm (r): Rename to...
(r-minimal): ...this new variable.
(r-with-recommended-packages): Rename to...
(r): ...this.
* guix/build-system/r.scm (default-r): Reference r-minimal.
* gnu/packages/emacs.scm (emacs-ess)[inputs],
gnu/packages/machine-learning.scm (shogun)[inputs],
gnu/packages/python.scm (python-rpy2)[inputs],
gnu/packages/bioinformatics.scm (ribotaper)[inputs],
(couger)[propagated-inputs],
(roary)[inputs],
(rsem)[inputs],
(rcas-web)[inputs]: Change "r" to "r-minimal".
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-with-recommended-packages.•••* gnu/packages/statistics.scm (r-with-recommended-packages): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r: Do not build recommended packages.•••* gnu/packages/statistics.scm (r)[arguments]: Rename phase
"build-recommended-packages-reproducibly" to "build-reproducibly"; add
configure flag "--without-recommended-packages".
* guix/import/cran.scm (default-r-packages): Remove recommended packages.
* gnu/packages/python.scm (python-rpy2)[inputs]: Add r-survival.
* gnu/packages/bioinformatics.scm (r-ape)[propagated-inputs]: Add r-lattice
and r-nlme.
(r-vegan)[propagated-inputs]: Add r-mass.
(r-genefilter)[propagated-inputs]: Add r-survival.
(r-grohmm)[propagated-inputs]: Add r-mass.
(r-bioccheck)[propagated-inputs]: Add r-codetools.
(r-summarizedexperiment)[propagated-inputs]: Add r-matrix.
(r-topgo)[propagated-inputs]: Add r-lattice.
(r-sva)[propagated-inputs]: Add r-mgcv.
(r-raremetals2)[propagated-inputs]: Add r-mass.
(r-vsn)[propagated-inputs]: Add r-lattice.
(r-pcamethods)[propagated-inputs]: Add r-mass.
* gnu/packages/bioinformatics.scm (r-ggplot2)[propagated-inputs]: Add r-mass.
(r-locfit)[propagated-inputs]: Add r-lattice.
(r-coda)[propagated-inputs]: Add r-lattice.
(r-irlba)[propagated-inputs]: Add r-matrix.
(r-glmnet)[propagated-inputs]: Add r-matrix.
(r-e1071)[propagated-inputs]: Add r-class.
(r-spams)[propagated-inputs]: Add r-lattice and r-matrix.
(r-hmisc)[propagated-inputs]: Add r-cluster, r-foreign, r-lattice, r-nnet, and
r-rpart.
(r-zoo)[propagated-inputs]: Add r-lattice.
(r-mixtools)[propagated-inputs]: Add r-boot and r-mass.
(r-flexmix)[propagated-inputs]: Add r-lattice and r-nnet.
(r-prabclus)[propagated-inputs]: Add r-mass.
(r-fpc)[propagated-inputs]: Add r-class, r-cluster, and r-mass.
(r-rcppeigen)[propagated-inputs]: Add r-matrix.
(r-matrixmodels)[propagated-inputs]: Add r-matrix.
(r-lme4)[propagated-inputs]: Add r-mass and r-nlme.
(r-pbkrtest)[propagated-inputs]: Add r-mass and r-matrix.
(r-car)[propagated-inputs]: Add r-mass, r-mgcv, and r-nnet.
(r-tclust)[propagated-inputs]: Add r-cluster.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-survival: Move to set of recommended R packages.•••* gnu/packages/statistics.scm (r-survival): Move up to set of recommended R
packages.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-spatial.•••* gnu/packages/statistics.scm (r-spatial): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-rpart: Move to the set of recommended packages.•••* gnu/packages/statistics.scm (r-rpart): Move up to the set of recommended
packages.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-nnet: Move to set of recommended R packages.•••* gnu/packages/machine-learning.scm (r-nnet): Move from here...
* gnu/packages/statistics.scm (r-nnet): ...to here because the other
recommended R packages are here.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-mgcv: Move to set of recommended R packages.•••* gnu/packages/statistics.scm (r-mgcv): Move up to set of recommended R
packages.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-nlme.•••* gnu/packages/statistics.scm (r-nlme): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-matrix: Move to set of recommended R packages.•••* gnu/packages/statistics.scm (r-matrix): Move to set of recommended R
packages.
| Ricardo Wurmus |
| 2017-03-17 | gnu: r-lattice: Move to other recommended R packages.•••* gnu/packages/statistics.scm (r-lattice): Move to the set of recommended R
packages.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-kernsmooth.•••* gnu/packages/statistics.scm (r-kernsmooth): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-foreign.•••* gnu/packages/statistics.scm (r-foreign): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-codetools.•••* gnu/packages/statistics.scm (r-codetools): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-cluster.•••* gnu/packages/statistics.scm (r-cluster): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-class.•••* gnu/packages/statistics.scm (r-class): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-mass.•••* gnu/packages/statistics.scm (r-mass): New variable.
| Ricardo Wurmus |
| 2017-03-17 | gnu: Add r-boot.•••* gnu/packages/statistics.scm (r-boot): New variable.
| Ricardo Wurmus |
| 2017-03-13 | gnu: r-hexbin: Update to 1.27.1-1.•••The package tarball was updated in place, resulting in a change in the hash
value. We decided to bump the version to 1.27.1-1 instead of keeping the
version at upstream's 1.27.1.
* gnu/packages/statistics.scm (r-hexbin): Update to 1.27.1-1.
| pjotrp |
| 2017-03-12 | gnu: Add r-tsne.•••* gnu/packages/bioinformatics.scm (r-tsne): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-ranger.•••* gnu/packages/statistics.scm (r-ranger): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-tclust.•••* gnu/packages/statistics.scm (r-tclust): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-sn.•••* gnu/packages/statistics.scm (r-sn): New variable.
Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-numderiv.•••* gnu/packages/statistics.scm (r-numderiv): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-mnormt.•••* gnu/packages/statistics.scm (r-mnormt): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-rcppprogress.•••* gnu/packages/statistics.scm (r-rcppprogress): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-caret.•••* gnu/packages/statistics.scm (r-caret): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-car.•••* gnu/packages/statistics.scm (r-car): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-pbkrtest.•••* gnu/packages/statistics.scm (r-pbkrtest): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-lme4.•••* gnu/packages/statistics.scm (r-lme4): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-nloptr.•••* gnu/packages/statistics.scm (r-nloptr): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-quantreg.•••* gnu/packages/statistics.scm (r-quantreg): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-matrixmodels.•••* gnu/packages/statistics.scm (r-matrixmodels): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-modelmetrics.•••* gnu/packages/statistics.scm (r-modelmetrics): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-rcppeigen.•••* gnu/packages/statistics.scm (r-rcppeigen): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-12 | gnu: Add r-minqa.•••* gnu/packages/statistics.scm (r-minqa): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-fnn.•••* gnu/packages/statistics.scm (r-fnn): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-pbapply.•••* gnu/packages/statistics.scm (r-pbapply): New variable.
Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-vgam.•••* gnu/packages/statistics.scm (r-vgam): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-fpc.•••* gnu/packages/statistics.scm (r-fpc): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-trimcluster.•••* gnu/packages/statistics.scm (r-trimcluster): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-robustbase.•••* gnu/packages/statistics.scm (r-robustbase): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-deoptimr.•••* gnu/packages/statistics.scm (r-deoptimr): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-prabclus.•••* gnu/packages/statistics.scm (r-prabclus): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-mclust.•••* gnu/packages/statistics.scm (r-mclust): New variable.
Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-flexmix.•••* gnu/packages/statistics.scm (r-flexmix): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
| 2017-03-11 | gnu: Add r-modeltools.•••* gnu/packages/statistics.scm (r-modeltools): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
| Raoul Jean Pierre Bonnal |
