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2017-01-06Merge branch 'master' into core-updatesLeo Famulari
2017-01-06gnu: python-pycrypto: Fix CVE-2013-7459.•••* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the patch. Use pypi-uri. Leo Famulari
2017-01-06gnu: nspr: Update to 4.13.1.•••* gnu/packages/gnuzilla.scm (nspr): Update to 4.13.1. Leo Famulari
2017-01-06gnu: Add r-copywriter.•••* gnu/packages/bioinformatics.scm (r-copywriter): New variable. Ricardo Wurmus
2017-01-06gnu: Add r-copyhelper.•••* gnu/packages/bioinformatics.scm (r-copyhelper): New variable. Ricardo Wurmus
2017-01-06gnu: Add r-chipseq.•••* gnu/packages/bioinformatics.scm (r-chipseq): New variable. Ricardo Wurmus
2017-01-06gnu: gnome-tweak-tool: Add missing inputs.•••* gnu/packages/gnome.scm (gnome-tweak-tool)[inputs]: Add gnome-desktop and libsoup. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Christopher Baines
2017-01-06gnu: gnome-tweak-tool: Make propagated-inputs just inputs.•••* gnu/packages/gnome.scm (gnome-tweak-tool)[propagated-inputs]: Merge with... [inputs]: ... this. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Christopher Baines
2017-01-06gnu: gnome-tweak-tool: Wrap program to set 'GI_TYPELIB_PATH'.•••* gnu/packages/gnome.scm (gnome-tweak-tool)[arguments]: Add 'wrap-program' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Christopher Baines
2017-01-06gnu: gnome-tweak-tool: Use glib-or-gtk-build-system.•••This allows gobject introspection namespaces to be found. * gnu/packages/gnome.scm (gnome-tweak-tool)[build-system]: Set to GLIB-OR-GTK-BUILD-SYSTEM. [arguments]: Use %GLIB-OR-GTK-BUILD-SYSTEM-MODULES in #:imported-modules. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Christopher Baines
2017-01-06gnu: bioruby: Update to 1.5.1.•••* gnu/packages/bioinformatics.scm (bioruby): Update to 1.5.1. Ben J Woodcroft
2017-01-06gnu: cd-hit: Update to 4.6.6.•••* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.6.6. Ben J Woodcroft
2017-01-06gnu: khal: Disable failing tests.•••* gnu/packages/patches/khal-disable-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/calendar.scm (khal): Use it. Leo Famulari
2017-01-06gnu: vdirsyncer: Update to 0.14.1.•••* gnu/packages/dav.scm (vdirsyncer): Update to 0.14.1. Leo Famulari
2017-01-06gnu: python-icalendar: Update to 3.11.1.•••* gnu/packages/python.scm (python-icalendar): Update to 3.11.1. Leo Famulari
2017-01-05gnu: gv: Do not propagate Ghostscript.•••* gnu/packages/gv.scm (gv)[propagated-inputs]: Remove. [arguments]: New field. [inputs]: Add GHOSTCRIPT/X. Ludovic Courtès
2017-01-06gnu: emacs-smartparens: Update to 1.9.0.•••* gnu/packages/emacs.scm (emacs-smartparens): Update to 1.9.0. Alex Kost
2017-01-06gnu: magit: Update to 2.10.0.•••* gnu/packages/emacs.scm (magit, emacs-magit-popup): Update to 2.10.0. Alex Kost
2017-01-06gnu: emacs-with-editor: Update to 2.5.9.•••* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.9. Alex Kost
2017-01-05gnu: Add ghc-markdown-unlit.•••* gnu/packages/haskell.scm (ghc-markdown-unlit): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Danny Milosavljevic
2017-01-05gnu: beep: Ignore substitute* return value.•••* gnu/packages/terminals.scm (beep)[arguments]: End 'patch-makefile phase with truth. Tobias Geerinckx-Rice
2017-01-05gnu: libtool: Correct replacement shebang.•••* gnu/packages/autotools.scm (libtool)[arguments]: Correct replacement shebang in 'restore-ltmain-shebang' phase. Leo Famulari
2017-01-05gnu: sdl2: Add fcitx input.•••* gnu/packages/sdl.scm (sdl2)[inputs]: Add fcitx. David Thompson
2017-01-05gnu: sdl2: Fix double input events bug.•••* gnu/packages/sdl.scm (sdl2)[inputs]: Add dbus, gblib, and ibus. David Thompson
2017-01-05Revert "gnu: gawk: Don't replace 'sh' reference with 'bash'."•••This commit causes too many rebuilds. It will be re-committed to core-updates. This reverts commit 5b2834ae790557a760fea4bf2b8c7bac1ea8f23d. Leo Famulari
2017-01-05gnu: gawk: Don't replace 'sh' reference with 'bash'.•••* gnu/packages/gawk.scm (gawk)[arguments]: Use /bin/sh instead of /bin/bash in 'set-shell-file-name' phase. Leo Famulari
2017-01-05gnu: libtool: Make sure all phases return a successful value.•••* gnu/packages/autotools.scm (libtool)[arguments]: Return #t from 'pre-check' and 'restore-ltmain-shebang' phases. Leo Famulari
2017-01-05gnu: irssi: Update to 1.0.0.•••* gnu/packages/irc.scm (irssi): Update to 1.0.0. [arguments]: Remove --with-ncurses configure flag. [native-inputs]: Move 'perl' to ... [inputs]: ... here. [home-page]: Use HTTPS. Marius Bakke
2017-01-05gnu: libtool: Don't replace 'sh' reference with 'bash'.•••Bash behaves differently based on how it is invoked (see Invocation in bash(1)). * gnu/packages/autotools.scm (libtool)[arguments]: Use /bin/sh instead of /bin/bash in 'pre-check' phase. Fix typo in comment. Leo Famulari
2017-01-05gnu: libtool: Restore ltmain.sh shebang.•••This fixes <http://bugs.gnu.org/25304> * gnu/packages/autotools.scm (libtool)[arguments]: Add new phase 'restore-ltmain-shebang'. [native-inputs]: Add help2man. Signed-off-by: Leo Famulari <leo@famulari.name> ng0
2017-01-05gnu: libtool: Use 'modify-phases'.•••* gnu/packages/autotools.scm (libtool): Use 'modify-phases'. [arguments]: Use 'modify-phases'. Signed-off-by: Leo Famulari <leo@famulari.name> ng0
2017-01-05gnu: Fix indentation of some python packages.•••This is a followup to abe2ec73..807a5b32. * gnu/packages/python.scm (python-snowballstemmer, python-sphinx-cloud-sptheme, python-sphinx-alabaster-theme): Fix indentation. Marius Bakke
2017-01-05gnu: Add python-sphinx-alabaster-theme.•••* gnu/packages/python.scm (python-sphinx-alabaster-theme, python2-sphinx-alabaster-theme): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Danny Milosavljevic
2017-01-05gnu: Add python-sphinx-cloud-sptheme.•••* gnu/packages/python.scm (python-sphinx-cloud-sptheme, python2-sphinx-cloud-sptheme): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Danny Milosavljevic
2017-01-05gnu: Add python-snowballstemmer.•••* gnu/packages/python.scm (python-snowballstemmer, python2-snowballstemmer): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Danny Milosavljevic
2017-01-05gnu: sed: Update to 4.3.•••* gnu/packages/base.scm (sed): Update to 4.3. [source]: Use xz tarball. Remove upstreamed patch. [arguments]: Fix '/bin/sh' -> 'bash' substitution. [home-page]: Use https. [native-inputs]: Add perl. * gnu/packages/patches/sed-hurd-path-max.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Marius Bakke
2017-01-05gnu: Add beep.•••* gnu/packages/terminals.scm (beep): New variable. Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr> José Miguel Sánchez García
2017-01-05gnu: Remove unused module import from (gnu packages mtools).•••This is a follow-up to commit 3b0f2ba46b8c14cf9d9729e13e006af697d07403. * gnu/packages/mtools.scm: Remove import of (gnu packages python). Tobias Geerinckx-Rice
2017-01-05gnu: ruby-nokogiri: Update to 1.7.0.1.•••* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.7.0.1. Ben Woodcroft
2017-01-05gnu: ruby-hoe: Update to 3.16.0.•••* gnu/packages/ruby.scm (ruby-hoe): Update to 3.16.0. Ben Woodcroft
2017-01-04gnu: bootstrap: Add the dynamic linker name for "powerpc-linux".•••This commit completes cross-compilation support for powerpc-linux-gnu. * gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add "powerpc-linux" case. Carlos Sánchez de La Lama
2017-01-04gnu: linux-libre: Adjust for PowerPC.•••* gnu/packages/linux.scm (system->defconfig): New procedure. (linux-libre-headers)[arguments]: Use it in 'build' phase to determine the target name. * gnu/packages/cross-base.scm (cross-kernel-headers)[xlinux-headers] (arguments): Likewise. Carlos Sánchez de La Lama
2017-01-04gnu: gcc: Adjust for PowerPC.•••* gnu/packages/gcc.scm (gcc-4.7)[arguments]: Add powerpc specific substitutions for dynamic linker and start files locations in 'pre-configure' phase. * gnu/packages/make-bootstrap.scm (%gcc-static)[arguments]: Add "gcc/config/rs6000/sysv4.h" to the list of files in 'remove-lgcc_s' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Carlos Sánchez de La Lama
2017-01-04gnu: unrtf: Fix CVE-2016-10091.•••* gnu/packages/patches/unrtf-CVE-2016-10091.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/unrtf.scm (unrtf)[source]: Use it. Leo Famulari
2017-01-04gnu: libreoffice: Update to 5.1.6.2.•••* gnu/packages/libreoffice.scm (libreoffice): Update to 5.1.6.2. Signed-off-by: Leo Famulari <leo@famulari.name> Alex Griffin
2017-01-04gnu: ocamlmod: Enable tests.•••Followup to 93eeadf0226078a6a9ecf57f84446044b4be249b. * gnu/packages/ocaml.scm (ocamlmod)[arguments]: Enable tests. Problem reported by Julien Lepiller <julien@lepiller.eu>. David Craven
2017-01-04gnu: ocaml-ounit: Enable tests.•••Followup to 7a76b4afd0ce296bb462be8cf66234e41672c285. * gnu/packages/ocaml.scm (ocaml-ounit)[arguments]: Enable tests. Problem reported by Julien Lepiller <julien@lepiller.eu>. David Craven
2017-01-04gnu: aria2: Update to 1.30.0.•••* gnu/packages/bittorrent.scm (aria2): Update to 1.30.0. Efraim Flashner
2017-01-04gnu: inkscape: Update to 0.92.0.•••* gnu/packages/patches/inkscape-drop-wait-for-targets.patch: Remove it. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/inkscape.scm (inkscape): Update to 0.92.0. [build-system]: Use "cmake-build-system". [native-inputs]: Add glib:bin. [arguments]: Remove obsolete arguments; disable tests. Ricardo Wurmus
2017-01-04gnu: Add ocaml-cmdliner.•••* gnu/packages/ocaml.scm (ocaml-cmdliner): New variable. Signed-off-by: David Craven <david@craven.ch> Julien Lepiller
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