summaryrefslogtreecommitdiff
path: root/gnu/packages
AgeCommit message (Collapse)Author
2022-10-27build-system/pyproject: Always run tests verbosely for supported backends.Marius Bakke
* guix/build-system/pyproject.scm (pyproject-build): Default to '() instead of #false for TEST-FLAGS. * guix/build/pyproject-build-system.scm (check): Unconditionally enable verbose test flags. * doc/guix.texi (Build Systems): Document this change. * gnu/packages/fontutils.scm (python-glyphslib)[arguments]: Remove verbosity from #:test-flags. * gnu/packages/pdf.scm (python-pydyf, weasyprint)[arguments]: Likewise. * gnu/packages/python-web.scm (python-openapi-spec-validator)[arguments]: Likewise. * gnu/packages/python-xyz.scm (python-path, python-tempora)[arguments]: Likewise.
2022-10-27gnu: python-deepmerge: Use pyproject-build-system.Marius Bakke
* gnu/packages/python-xyz.scm (python-deepmerge)[build-system]: Set to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove obsolete phases. [native-inputs]: Remove PYTHON-PYPA-BUILD and PYTHON-WHEEL.
2022-10-27gnu: python-scikit-build: Switch to pyproject-build-system.Marius Bakke
* gnu/packages/python-xyz.scm (python-scikit-build)[build-system]: Set to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove obsolete phases. [native-inputs]: Remove PYTHON-PYPA-BUILD and PYTHON-WHEEL.
2022-10-27gnu: python-cattrs: Use pyproject-build-system.Marius Bakke
* gnu/packages/python-xyz.scm (python-cattrs)[build-system]: Set to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove obsolete phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-path: Use pyproject-build-system.Marius Bakke
* gnu/packages/python-xyz.scm (python-path-bootstrap)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove #:phases. [native-inputs]: Remove PYTHON-PYPA-BUILD. (python-path): Remove #:phases. Add #:test-flags.
2022-10-27gnu: python-openapi-spec-validator: Use pyproject-build-system.Marius Bakke
* gnu/packages/python-web.scm (python-openapi-spec-validator)[build-system]: Set to PYPROJECT-BUILD-SYSTEM. [arguments]: Add #:test-flags. Remove obsolete phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-openapi-schema-validator: Use pyproject-build-system.Marius Bakke
* gnu/packages/python-web.scm (python-openapi-schema-validator)[build-system]: Set to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: zabbix-cli: Switch to pyproject-build-system.Marius Bakke
* gnu/packages/monitoring.scm (zabbix-cli)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove check phase.
2022-10-27gnu: python-pygmsh: Use pyproject-build-system.Marius Bakke
* gnu/packages/simulation.scm (python-pygmsh)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-tempora: Switch to pyproject-build-system.Marius Bakke
* gnu/packages/python-xyz.scm (python-tempora)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Add #:test-flags. Remove #:phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-mypy-protobuf: Switch to pyproject-build-system.Marius Bakke
* gnu/packages/protobuf.scm (python-mypy-protobuf)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-ufolib2: Use pyproject-build-system.Marius Bakke
* gnu/packages/fontutils.scm (python-ufolib2)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove. [native-inputs]: Remove PYTHON-PYPA-BUILD and PYTHON-WHEEL.
2022-10-27gnu: python-statmake: Use pyproject-build-system.Marius Bakke
* gnu/packages/fontutils.scm (python-statmake)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-glyphslib: Use pyproject-build-system.Marius Bakke
* gnu/packages/fontutils.scm (python-glyphslib)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Add #:test-flags. Remove #:phases. [native-inputs]: Remove PYTHON-PYPA-BUILD and PYTHON-WHEEL.
2022-10-27gnu: weasyprint: Use pyproject-build-system.Marius Bakke
* gnu/packages/pdf.scm (weasyprint)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases. Add #:test-flags. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-pydyf: Use pyproject-build-system.Marius Bakke
* gnu/packages/pdf.scm (python-pydyf)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove #:phases. Add #:test-flags. [native-inputs]: Remove PYTHON-PYPA-BUILD.
2022-10-27gnu: python-autopage: Use pyproject-build-system.Marius Bakke
* gnu/packages/python-xyz.scm (python-autopage)[build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases.
2022-10-27build-system: Add pyproject-build-system.Lars-Dominik Braun
This is an experimental build system based on python-build-system that implements PEP 517-compliant builds. * doc/guix.texi (Build Systems): Add pyproject-build-system section. * doc/contributing.texi (Python Modules): Mention pyproject.toml and the PYTHON-TOOLCHAIN package, as well as differences to python-build-system. * guix/build-system/pyproject.scm, guix/build/pyproject-build-system.scm, gnu/packages/aux-files/python/sanity-check-next.py, gnu/packages/python-commencement.scm: New files. * Makefile.am (MODULES): Register the new build systems. * gnu/local.mk (GNU_SYSTEM_MODULES): Add python-commencement.scm. * gnu/packages/python.scm (python-sans-pip, python-sans-pip-wrapper): New variables. Co-authored-by: Marius Bakke <marius@gnu.org>
2022-10-27gnu: python-pip: Move to (gnu packages python-build).Marius Bakke
* gnu/packages/python-xyz.scm (python-pip): Move from here ... * gnu/packages/python-build.scm (python-pip): ... to here.
2022-10-27gnu: pypy: Move to separate module.Lars-Dominik Braun
This removes the need to import (gnu packages python-xyz) in (gnu packages python), avoiding issues with circular imports. * gnu/packages/python.scm (pypy): Move… * gnu/packages/pypy.scm (pypy): …here * gnu/local.mk: Register new file. Co-authored-by: Marius Bakke <marius@gnu.org>
2022-10-27gnu: python-setuptools: Move to python-build.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-setuptools): Move… * gnu/packages/python-build.scm: …here. * gnu/packages/chemistry.scm, gnu/packages/messaging.scm, gnu/packages/sequoia.scm, tests/lint.scm: Adjust module imports accordingly. Co-authored-by: Marius Bakke <marius@gnu.org>
2022-10-27gnu: Zabbix: Update to 6.0.9.Marius Bakke
* gnu/packages/monitoring.scm (zabbix-agentd): Update to 6.0.9.
2022-10-27gnu: zabbix-agentd: Enable TLS support.Marius Bakke
* gnu/packages/monitoring.scm (zabbix-agentd)[arguments]: Pass "--with-gnutls" in #:configure-flags. [inputs]: Add GNUTLS. (zabbix-server): Inherit these changes.
2022-10-27gnu: flair: Add missing R packages.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (flair)[propagated-inputs]: Add python-rpy2. [inputs]: Add r-minimal, r-deseq2, r-drimseq, r-ggplot2, r-lazyeval, r-qqman, and r-rlang. [arguments]: Add phase "wrap-executable".
2022-10-27gnu: emacs-buttercup: Update to 1.28.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-buttercup): Update to 1.28.
2022-10-27gnu: Add r-aseb.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-aseb): New variable.
2022-10-27gnu: Add r-asgsca.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-asgsca): New variable.
2022-10-27gnu: Add r-aspli.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-aspli): New variable.
2022-10-27gnu: Add r-assessorf.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-assessorf): New variable.
2022-10-27gnu: Add r-asset.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-asset): New variable.
2022-10-27gnu: Add r-atena.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-atena): New variable.
2022-10-27gnu: Add r-atsnp.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-atsnp): New variable.
2022-10-27gnu: Add r-attract.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-attract): New variable.
2022-10-27gnu: Add r-awfisher.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-awfisher): New variable.
2022-10-27gnu: Add r-awst.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-awst): New variable.
2022-10-27gnu: ungoogled-chromium: Update to 107.0.5304.68-1.Marius Bakke
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for M107. (%chromium-version): Set to 107.0.5304.68. (%ungoogled-origin): Update hash. (%chromium-gcc-patchset, gcc-patch): Remove. (%gcc-patches): Empty list. (ungoogled-chromium)[source]: Update hash. [arguments]: Add clang_base_path and use_system_libwayland_server to #:configure-flags. Adjust substitutions. [inputs]: Add QTBASE-5.
2022-10-27gnu: Add r-barcodetrackr.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-barcodetrackr): New variable.
2022-10-27gnu: Add r-banocc.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-banocc): New variable.
2022-10-27gnu: Add r-bandits.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-bandits): New variable.
2022-10-27gnu: Add r-bambu.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-bambu): New variable.
2022-10-27gnu: Add r-badregionfinder.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-badregionfinder): New variable.
2022-10-27gnu: Add r-bader.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-bader): New variable.
2022-10-27gnu: Add r-bac.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-bac): New variable.
2022-10-27gnu: Add r-basespacer.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-basespacer): New variable.
2022-10-27gnu: Add r-eulerr.Mădălin Ionel Patrașcu
* gnu/packages/cran.scm (r-eulerr): New variable.
2022-10-27gnu: Add r-tximportdata.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-tximportdata): New variable.
2022-10-27gnu: Add r-fishpond.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-fishpond): New variable.
2022-10-27gnu: Add python-multivelo.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (python-multivelo): New variable.
2022-10-27gnu: Add r-seuratwrappers.Hong.Li@mdc-berlin.de
* gnu/packages/bioinformatics.scm (r-seuratwrappers): New variable.
2022-10-27gnu: r-seurat: Update to 4.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-seurat): Update to 4.2.0.
generated by cgit v1.2.3 (git 2.46.0) at 2024-09-25 21:13:32 +0000