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2021-08-30gnu: python-scanpy: Update to 1.8.1....* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.8.1. [arguments]: Bulid with flit; update list of broken tests. [native-inputs]: Add python-flit and python-anndata:source. Ricardo Wurmus
2021-08-30gnu: Add python-jupyter-server....* gnu/packages/jupyter.scm (python-jupyter-server): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-anyio....* gnu/packages/python-xyz.scm (python-anyio): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-pytest-mock-3....* gnu/packages/check.scm (python-pytest-mock-3): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-pytest-tornasync....* gnu/packages/python-check.scm (python-pytest-tornasync): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-pytest-console-scripts....* gnu/packages/python-check.scm (python-pytest-console-scripts): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-dna-features-viewer....* gnu/packages/bioinformatics.scm (python-dna-features-viewer): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-svgutils....* gnu/packages/python-xyz.scm (python-svgutils): New variable. Ricardo Wurmus
2021-08-30gnu: Add python-pybbi....* gnu/packages/bioinformatics.scm (python-pybbi): New variable. Ricardo Wurmus
2021-08-30gnu: wine: Update to 6.16....* gnu/packages/wine.scm (wine): Update to 6.16. Leo Prikler
2021-08-30gnu: Add h-client....* gnu/packages/hardware.scm (h-client): New variable. Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at> Denis 'GNUtoo' Carikli
2021-08-30gnu: wine: Update to 6.14....* gnu/packages/wine.scm (wine): Update to 6.14. [#:phases]: Patch Makefile to correctly locate ntdll.so. (wine64)[#:phases]: Likewise. Leo Prikler
2021-08-30gnu: Add ocaml-odoc-parser....* gnu/packages/ocaml.scm (ocaml-odoc-parser): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Xinglu Chen
2021-08-30gnu: scrot: Update to 1.6....* gnu/packages/xdisorg.scm (scrot): Update to 1.6. [native-inputs]: Add PKG-CONFIG. [inputs]: Add IMLIB2. Ludovic Courtès
2021-08-30gnu: extra-cmake-modules: Avoid dependency on qtbase when on armhf....* gnu/packages/kde-frameworks.scm (extra-cmake-modules)[native-inputs]: Remove QTBASE-5 on armhf-linux. [arguments]: Set #:tests? accordingly. Ludovic Courtès
2021-08-30gnu: guile-websocket: Update to 0.1-d17878f6....* gnu/packages/guile-xyz.scm (guile-websocket)[source]: Update to 0.1-d17878f6. Use https:// url. [phases]: Remove "update-guile-version" stage. [native-inputs]: Add pkg-config. Jan (janneke) Nieuwenhuizen
2021-08-29gnu: Add emacs-helm-xref....* gnu/packages/emacs-xyz.scm (emacs-helm-xref): New variable. Pierre Langlois
2021-08-29gnu: mu: Update to 1.6.5....* gnu/packages/mail.scm (mu): Update to 1.6.5. Pierre Langlois
2021-08-29gnu: shadow: Use the cross-compiled shell at runtime....Make sure that the executed shell at runtime is the cross-compiled shell and not the native shell. * gnu/packages/admin.scm (shadow)[arguments]: Add a set-runtime-shell phase. [inputs]: Add bash-minimal when cross-compiling. Mathieu Othacehe
2021-08-29gnu: Add emacs-hideshowvis....* gnu/packages/emacs-xyz.scm (emacs-hideshowvis): New variable. Oleg Pykhalov
2021-08-29gnu: rofi: Update to 1.7.0....* gnu/packages/xdisorg.scm (rofi): Update to 1.7.0. [inputs]: Add xcb-util-cursor. [source]<origin>, [home-page]: Change URL to the redirected one. Brice Waegeneire
2021-08-29isc-dhcp: Fix dhclient-script wrapper when cross-compiling....This causes many rebuilds, but only when cross-compiling. This should unbreak Internet access on cross-compiled pinebook images. Reported-By: Guest4977 (on IRC) * gnu/gnunet/packages/admin.scm (isc-dhcp)[arguments]<#:phases>{post-install}: Use the cross-compiled bash when cross-compiling. Work-around <https://issues.guix.gnu.org/49290>. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Maxime Devos
2021-08-29gnu: python-pytest-django: Update to 4.4.0....* gnu/packages/django.scm (python-pytest-django): Update to 4.4.0. [tests?]: Disable test suite. [native-inputs]: Replace python-pytest-xdist by python-pytest-xdist-next. [home-page]: Update home page. Maxim Cournoyer
2021-08-29gnu: python-django: Update to 3.2.6....* gnu/packages/django.scm (python-django): Update to 3.2.6. Maxim Cournoyer
2021-08-29gnu: ansible: Update to 4.4.0....* gnu/packages/admin.scm (ansible): Update to 4.4.0. [native-inputs]: Remove field. [inputs]: Likewise. [arguments]: Likewise. [propagated-inputs]: New field. [native-search-paths]: New search path. [description]: Update description. Maxim Cournoyer
2021-08-29gnu: Add ansible-core....* gnu/packages/admin.scm (ansible-core): New variable. Maxim Cournoyer
2021-08-29gnu: Add python-pytest-xdist-next....* gnu/packages/check.scm (python-pytest-xdist-next): New variable. Maxim Cournoyer
2021-08-29gnu: python-pytest-xdist: Fix by downgrading to 1.34.0, run test suite....Commit ed72e558313 updated the package to 2.1.0, but this version doesn't work with Pytest 5, the version currently used in Guix. Downgrade to the last version that is compatible with Pytest 5. * gnu/packages/check.scm (python-pytest-xdist): Downgrade to 1.34.0, with a comment explaining why. Strip trailing #t. [source]: Remove origin modules and snippet field, no longer necessary. [phases]{check}: Override to run the test suite. [propagated-inputs]: Remove python-py and add python-pytest-forked. Maxim Cournoyer
2021-08-29gnu: python-pytest-mock: Update to 3.6.1 and run test suite....* gnu/packages/check.scm (python-pytest-mock): Update to 3.6.1. [phases]{check}: Override to run test suite. [propagated-inputs]: Add python-pytest-asyncio. Maxim Cournoyer
2021-08-29gnu: python-pytest-asyncio: Enable tests and patch for Python 3.8....* gnu/packages/patches/python-pytest-asyncio-python-3.8.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/check.scm (python-pytest-asyncio) [source]: Fetch from git and apply above patch. [phases]: Override the check phase, enabling tests. Maxim Cournoyer
2021-08-29gnu: python-pytest-forked: Update to 1.3.0 and run test suite....* gnu/packages/check.scm (python-pytest-forked)[origin]: Use git. [phases]{disable-setuptools-scm}: New phase. {check}: Override phase. [propagated-inputs]: Remove field. [native-inputs]: Remove ??? and add python-pytest-bootstrap. [home-page]: Fix indentation. [synopsis]: Update. [description]: Expound. Maxim Cournoyer
2021-08-29gnu: python-py-next: Update to 1.10.0....* gnu/packages/python-xyz.scm (python-py-next): Update to 1.10.0. Maxim Cournoyer
2021-08-29gnu: python-mock: Update description....* gnu/packages/check.scm (python-mock) [description]: Mention this library is now part of Python 3.3 onward. Maxim Cournoyer
2021-08-29gnu: python-rope: Update to 0.19.0 and remove python2-rope....* gnu/packages/python-xyz.scm (python-rope): Update to 0.19.0. [source]: Fix indentation. [arguments]: Remove. [native-inputs]: Remove. [license]: Correct license. (python2-rope): Delete variable. Maxim Cournoyer
2021-08-29gnu: python-execnet: Update to 1.9.0 and enable tests....* gnu/packages/patches/python-execnet-read-only-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/python-xyz.scm (python-execnet): Update to 1.9.0. [source]: Fix indentation. [arguments]: Enable tests, replacing the default check phase. Maxim Cournoyer
2021-08-29gnu: python-pytest-6: Update to 6.2.4 and propagate iniconfig....* gnu/packages/check.scm (python-pytest-6): Update to 6.2.4. Fix typo. Removing trailing #t. [native-inputs]: Delete the extraneous python-mock input. Move python-iniconfig to... [propagated-inputs]: ... here. Maxim Cournoyer
2021-08-29gnu: Add python-pyspnego....* gnu/packages/python-xyz.scm (python-pyspnego): New variable. Maxim Cournoyer
2021-08-29gnu: Add python-ncclient....* gnu/packages/python-xyz.scm (python-ncclient): New variable. Maxim Cournoyer
2021-08-29gnu: Add python-resolvelib-0.5....* gnu/packages/python-xyz.scm (python-resolvelib-0.5): New variable. Maxim Cournoyer
2021-08-29gnu: Add python-resolvelib....* gnu/packages/python-xyz.scm (python-resolvelib): New variable. Maxim Cournoyer
2021-08-29gnu: Add python-commentjson....* gnu/packages/python-xyz.scm (python-commentjson): New variable. Maxim Cournoyer
2021-08-29gnu: Add emacs-company-org-block....* gnu/packages/emacs-xyz.scm (emacs-company-org-block): New variable. Oleg Pykhalov
2021-08-28gnu: Add lsofgraph....* gnu/packages/admin.scm (lsofgraph): New variable. Oleg Pykhalov
2021-08-28gnu: mame: Update to 0.235....* gnu/packages/emulators.scm (mame): Update to 0.235. Nicolas Goaziou
2021-08-27gnu: python-pyopencl: Update to 2021.2.6....* gnu/packages/opencl.scm (python-pyopencl)[version]: Update to 2021.2.6. [source]: Point to new git repository. [#:phases]: Remove unused phases. [inputs]: Use unversioned opencl-headers. [propagated-inputs]: Remove unused inputs. Lars-Dominik Braun
2021-08-27gnu: python-pytools: Update to 2021.2.7....* gnu/packages/opencl.scm (python-pytools)[version]: Update to 2021.2.7. [propagated-inputs]: Remove unused inputs. Lars-Dominik Braun
2021-08-27gnu: Add clpeak....* gnu/packages/benchmark.scm (clpeak): New variable. Lars-Dominik Braun
2021-08-27gnu: ocl-icd: Replace with opencl-icd-loader....ocl-icd’s project page is dead and the source code is unavailable. * gnu/packages/opencl.scm (ocl-icd): Alias to opencl-icd-loader. (clinfo)[inputs]: Use opencl-icd-loader. (beignet)[inputs]: Dito. (pocl)[inputs]: Dito. (python-pyopencl)[inputs]: Dito. * gnu/packages/games.scm (leela-zero)[inputs]: Dito. * gnu/packages/photo.scm (darktable)[inputs]: Dito. * gnu/packages/rocm.scm (rocm-opencl-runtime)[inputs]: Dito. Lars-Dominik Braun
2021-08-27gnu: Add opencl-icd-loader....* gnu/packages/opencl.scm (opencl-icd-loader): New variable. Lars-Dominik Braun
2021-08-27gnu: clinfo: Update to 3.0.21.02.21 and simplify package....* gnu/packages/opencl.scm (clinfo) [version]: Update to 3.0.21.02.21. [arguments]: Simplify #:phases by adding make arguments to #:make-flags. Lars-Dominik Braun