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2021-05-26gnu: Add r-logspline.Lars-Dominik Braun
* gnu/packages/statistics.scm (r-logspline): New variable.
2021-05-26gnu: Add r-kknn.Lars-Dominik Braun
* gnu/packages/statistics.scm (r-kknn): New variable.
2021-05-26gnu: Add r-hypergeo.Lars-Dominik Braun
* gnu/packages/cran.scm (r-hypergeo): New variable.
2021-05-26gnu: Add r-elliptic.Lars-Dominik Braun
* gnu/packages/cran.scm (r-elliptic): New variable.
2021-05-26gnu: Add r-contfrac.Lars-Dominik Braun
* gnu/packages/cran.scm (r-contfrac): New variable.
2021-05-26gnu: Add r-decipher.Roel Janssen
* gnu/packages/bioconductor.scm (r-decipher): New variable.
2021-05-26gnu: Add r-deepsnv.Roel Janssen
* gnu/packages/bioconductor.scm (r-deepsnv): New variable.
2021-05-26gnu: Add r-geneoverlap.Roel Janssen
* gnu/packages/bioconductor.scm (r-geneoverlap): New variable.
2021-05-26gnu: cuirass: Update to 1.0.0-20.524b81d.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-20.524b81d.
2021-05-26gnu: Add minimodem.Guillaume Le Vaillant
* gnu/packages/radio.scm (minimodem): New variable.
2021-05-26gnu: Add r-chipseeker.Roel Janssen
* gnu/packages/bioconductor.scm (r-chipseeker): New variable.
2021-05-26gnu: Add r-model4you.Roel Janssen
* gnu/packages/cran.scm (r-model4you): New variable.
2021-05-26gnu: Add r-pvclust.Roel Janssen
* gnu/packages/cran.scm (r-pvclust): New variable.
2021-05-26gnu: Add r-bsgenome-btaurus-ucsc-bostau8.Roel Janssen
* gnu/packages/bioconductor.scm (r-bsgenome-btaurus-ucsc-bostau8): New variable.
2021-05-26gnu: Add r-phantompeakqualtools.Roel Janssen
* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): New variable.
2021-05-26gnu: Add r-spp.Roel Janssen
* gnu/packages/bioinformatics.scm (r-spp): New variable.
2021-05-26gnu: Add r-aneufinder.Roel Janssen
* gnu/packages/bioconductor.scm (r-aneufinder): New variable.
2021-05-26gnu: Add r-aneufinderdata.Roel Janssen
* gnu/packages/bioconductor.scm (r-aneufinderdata): New variable.
2021-05-25gnu: Add rsync 3.2.3.Leo Famulari
* gnu/packages/rsync.scm (rsync-next): New variable.
2021-05-25gnu: nginx: Update to 1.21.0 [fixes CVE-2021-23017].Leo Famulari
* gnu/packages/web.scm (nginx, nginx-documentation): Update to 1.21.0.
2021-05-25gnu: qhull: Build position independent.Efraim Flashner
* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to build code position independent.
2021-05-25gnu: cuirass: Update to 1.0.0-19.e1382f0.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-19.e1382f0.
2021-05-25gnu: qhull: Link binaries to shared library.Efraim Flashner
This drops the package size by nearly 60%. * gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to link binaries to shared library.
2021-05-25gnu: Add perl-set-intervaltree.Roel Janssen
* gnu/packages/perl.scm (perl-set-intervaltree): New variable.
2021-05-25gnu: Add perl-log-message-simpleRoel Janssen
* gnu/packages/perl.scm (perl-log-message-simple): New variable.
2021-05-25gnu: Add perl-log-message.Roel Janssen
* gnu/packages/perl.scm (perl-log-message): New variable.
2021-05-25gnu: Add perl-extutils-manifest.Roel Janssen
* gnu/packages/perl.scm (perl-extutils-manifest): New variable.
2021-05-25gnu: Add perl-data-uuid.Roel Janssen
* gnu/packages/perl.scm (perl-data-uuid): New variable.
2021-05-25gnu: cuirass: Update to 1.0.0-18.b1abb44.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-18.b1abb44.
2021-05-25gnu: Add perl-const-fast.Roel Janssen
* gnu/packages/perl.scm (perl-const-fast): New variable.
2021-05-25gnu: emacs-shell-command+: Update to 2.2.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-shell-command+): Update to 2.2.0.
2021-05-25gnu: Add kanatest.nixo
* gnu/packages/education.scm (kanatest): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: emacs-vertico: Update to 0.11.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.11. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: openttd-engine: Update to 1.11.2.Solene Rapenne via Guix-patches via
* gnu/packages/games.scm (openttd-engine): Update to 1.11.2. [build-system]: Switch to CMake. [arguments]: Enable tests. (openttd)[arguments]<#:configure-flags>: Use CMake flags. <#:phases>: Remove `configure'. Copy assets file before check step to enable tests. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: emacs-xyz.scm: Add missing copyright line.Nicolas Goaziou
2021-05-25gnu: Add emacs-geiser-racket.David Dashyan
* gnu/packages/emacs-xyz.scm (emacs-geiser-racket): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: lagrange: Update to 1.4.2.Solene Rapenne via Guix-patches via
* gnu/packages/web-browsers.scm (lagrange): Update to 1.4.2. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: Remove unnecessary patches for emacs-geiser.Alexandr Vityazev
* gnu/packages/patches/emacs-geiser-autoload-activate-implementation.patch: * gnu/packages/patches/emacs-geiser-guile-auto-activate.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Apply file removal. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: emacs-geiser-guile: Update to 0.17.Alexandr Vityazev
* gnu/packages/emacs-xyz (emacs-geiser-guile): Update to 0.17. [patches]: Remove. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: emasc-geiser: Update to 0.16.Alexandr Vityazev
* gnu/packages/emacs-xyz (emacs-geiser): Update to 0.16. [patches]: Remove. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25gnu: Add cl-djula.Sharlatan Hellseher
* gnu/packages/lisp-xyz.scm: (sbcl-djula, ecl-djula, cl-djula): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-25gnu: Add cl-slice.Sharlatan Hellseher
* gnu/packages/lisp-xyz.scm (sbcl-cl-slice, ecl-cl-slice, cl-slice): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-25gnu: Add cl-locale.Sharlatan Hellseher
* gnu/packages/lisp-xyz.scm (sbcl-cl-locale, ecl-cl-locale, cl-locale): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-25gnu: Add cl-parser-combinators.Sharlatan Hellseher
* gnu/packages/lisp-xyz.scm (sbcl-parser-combinators, ecl-parser-combinators, cl-parser-combinators): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-25gnu: Add cl-gettext.Sharlatan Hellseher
* gnu/packages/lisp-xyz.scm (sbcl-gettext, ecl-gettext, cl-gettext): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-25gnu: Add cl-arnesi.Sharlatan Hellseher
* gnu/packages/lisp-xyz.scm (sbcl-arnesi, ecl-arnesi, cl-arnesi): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-05-25gnu: infamous-plugins: Update to 0.3.0.Efraim Flashner
* gnu/packages/audio.scm (infamous-plugins): Update to 0.3.0.
2021-05-25gnu: infamous-plugins: Fix build.Efraim Flashner
Reported by Thorsten Wilms <t_w_@freenet.de>. Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=48588> * gnu/packages/audio.scm (infamous-plugins)[arguments]: Add phase to restore compatibility with packaged lv2.
2021-05-25gnu: i2pd: Allow skipping tests.Efraim Flashner
* gnu/packages/i2p.scm (i2pd)[arguments]: Adjust custom 'check phase to honor --without-tests flag.
2021-05-25gnu: i2pd: Reflow package definition.Efraim Flashner
* gnu/packages/i2p.scm (i2pd): Reflow package definition.
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