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* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-erma): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.20.1.
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* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-biocio): Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.4.0.
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* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-scran): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-scater): Update to 1.24.0.
[propagated-inputs]: Add r-rcppml.
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* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.6.2.
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* gnu/packages/bioconductor.scm (r-singler): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-maftools): Update to 2.12.0.
[propagated-inputs]: Add r-dnacopy.
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* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-cner): Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.12.0.
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* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.18.2.
[source]: Adjust snippet.
[arguments]: Update build phase 'do-not-use-bundled-hdf5.
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* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-hitc): Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-fithic): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.40.0.
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* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.34.0.
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* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-icens): Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-m3c): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.8.0.
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* gnu/packages/bioconductor.scm (r-biodist): Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-biocset): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-biocor): Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.30.1.
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* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.4.0.
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* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.24.0.
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* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.32.0.
[propagated-inputs]: Remove r-optparse.
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* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.60.0.
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* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-graphite): Update to 1.42.0.
[propagated-inputs]: Remove r-checkmate; add r-rlang.
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* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.34.0.
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