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2022-05-31gnu: Remove python2-peewee.Maxim Cournoyer
* gnu/packages/databases.scm (python2-peewee): Delete variable.
2022-05-31gnu: Remove python2-trollius-redis.Maxim Cournoyer
* gnu/packages/databases.scm (python2-trollius-redis): Delete variable.
2022-05-31gnu: Remove python2-redis.Maxim Cournoyer
* gnu/packages/databases.scm (python2-redis): Delete variable.
2022-05-31gnu: Remove python2-neo4j-driver.Maxim Cournoyer
* gnu/packages/databases.scm (python2-neo4j-driver): Delete variable.
2022-05-31gnu: Remove nmoldyn.Maxim Cournoyer
* gnu/packages/chemistry.scm (nmoldyn): Delete variable.
2022-05-31gnu: Remove domainfinder.Maxim Cournoyer
* gnu/packages/chemistry.scm (domainfinder): Delete variable.
2022-05-31gnu: Remove python2-nose-randomly.Maxim Cournoyer
* gnu/packages/check.scm (python2-nose-randomly): Delete variable.
2022-05-31gnu: Remove python2-pytest-subtesthack.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-subtesthack): Delete variable.
2022-05-31gnu: Remove python2-pytest-flakes.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-flakes): Delete variable.
2022-05-31gnu: Remove python2-cov-core.Maxim Cournoyer
* gnu/packages/check.scm (python2-cov-core): Delete variable.
2022-05-31gnu: Remove python2-discover.Maxim Cournoyer
* gnu/packages/check.scm (python2-discover): Delete variable.
2022-05-31gnu: Remove python2-flexmock.Maxim Cournoyer
* gnu/packages/check.scm (python2-flexmock): Delete variable.
2022-05-31gnu: Remove python2-minimock.Maxim Cournoyer
* gnu/packages/check.scm (python2-minimock): Delete variable.
2022-05-31gnu: Remove python2-rednose.Maxim Cournoyer
* gnu/packages/check.scm (python2-rednose): Delete variable.
2022-05-31gnu: Remove python2-python-paramunittest.Maxim Cournoyer
* gnu/packages/check.scm (python2-python-paramunittest): Delete variable.
2022-05-31gnu: Remove python2-pytest-capturelog.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-capturelog): Delete variable.
2022-05-31gnu: Remove python2-nose2.Maxim Cournoyer
* gnu/packages/check.scm (python2-nose2): Delete variable.
2022-05-31gnu: Remove python2-testlib.Maxim Cournoyer
* gnu/packages/check.scm (python2-testlib): Delete variable.
2022-05-31gnu: Remove python2-pytest-catchlog.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-catchlog): Delete variable.
2022-05-31gnu: Remove python2-nose-timer.Maxim Cournoyer
* gnu/packages/check.scm (python2-nose-timer): Delete variable.
2022-05-31gnu: Remove transmission-remote-cli.Maxim Cournoyer
* gnu/packages/bittorrent.scm (transmission-remote-cli): Delete variable.
2022-05-31gnu: Remove pyicoteo.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (pyicoteo): Delete variable.
2022-05-31gnu: Remove python2-pbcore.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pbcore): Delete variable.
2022-05-31gnu: Remove python2-pyfaidx.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pyfaidx): Delete variable.
2022-05-31gnu: Remove python2-screed.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-screed): Delete variable.
2022-05-31gnu: Remove miso.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (miso): Delete variable.
2022-05-31gnu: Remove python2-warpedlmm.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-warpedlmm): Delete variable.
2022-05-31gnu: Remove poretools.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (poretools): Delete variable.
2022-05-31gnu: Remove python2-dendropy.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-dendropy): Delete variable.
2022-05-31gnu: Remove bamm.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (bamm): Delete variable.
2022-05-31gnu: Remove python2-pybedtools.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pybedtools): Delete variable.
2022-05-31gnu: Remove python2-htseq.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-htseq): Delete variable.
2022-05-31gnu: Remove pepr.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (pepr): Delete variable.
2022-05-31gnu: tetoolkit: Update to 2.2.1b.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b. [python]: Delete argument. [phases]: Delete trailing #t. {make-writable}: Delete phase. {adjust-requirements}: New phase. {patch-invocations}: Use search-input-file. {wrap-program}: Use search-input-file. [inputs]: Remove python2-argparse. Replace python2-pysam with python-pysam. [home-page]: Update URL.
2022-05-31gnu: Remove python2-pybigwig.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pybigwig): Delete variable.
2022-05-31gnu: Remove ribodiff.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (ribodiff): Delete variable.
2022-05-31gnu: Remove grit.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (grit): Delete variable.
2022-05-31gnu: Remove python2-fastalite.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-fastalite): Delete variable.
2022-05-31gnu: Remove python2-pyaudio.Maxim Cournoyer
* gnu/packages/audio.scm (python2-pyaudio): Delete variable.
2022-05-31gnu: Remove raul-devel.Maxim Cournoyer
* gnu/packages/audio.scm (raul-devel): Delete variable.
2022-05-31gnu: Remove raul.Maxim Cournoyer
* gnu/packages/audio.scm (raul): Delete variable.
2022-05-31gnu: Remove ingen.Maxim Cournoyer
* gnu/packages/music.scm (ingen): Delete variable.
2022-05-31gnu: Remove python2-pyalsaaudio.Maxim Cournoyer
* gnu/packages/audio.scm (python2-pyalsaaudio): Delete variable.
2022-05-31gnu: Remove graphios.Maxim Cournoyer
* gnu/packages/admin.scm (graphios): Delete variable.
2022-05-31gnu: Remove python2-langkit.Maxim Cournoyer
* gnu/packages/ada.scm (python2-langkit): Delete variable.
2022-05-31gnu: Remove python-pytest-runner-2.Maxim Cournoyer
* gnu/packages/check.scm (python-pytest-runner-2): Delete variable. (python2-pytest-runner): Likewise.
2022-05-31gnu: icecat: Update to 91.10.0-guix0-preview1 [security fixes].Mark H Weaver
Includes fixes for CVE-2022-31736, CVE-2022-31737, CVE-2022-31738, CVE-2022-31739, CVE-2022-31740, CVE-2022-31741, CVE-2022-31742, and CVE-2022-31747. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes.
2022-05-31gnu: ungoogled-chromium: Update to 102.0.5005.61-3.Marius Bakke
* gnu/packages/chromium.scm (%ungoogled-revision): Bump to latest. (%ungoogled-origin): Update hash.
2022-05-31gnu: python-sip-4: Update to 4.19.25.Efraim Flashner
* gnu/packages/qt.scm (python-sip-4): Update to 4.19.25.
2022-05-31gnu: guile-ac-d-bus: Run test suite.Maxim Cournoyer
* gnu/packages/patches/guile-ac-d-bus-fix-tests.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/guile-xyz.scm (guile-ac-d-bus) [source]: Apply patch. [phases]{check}: New phase. [native-inputs]: Add bash-minimal.
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