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2018-03-19gnu: patchelf: Update argument phase.Efraim Flashner
* gnu/packages/elf.scm (patchelf)[arguments]: Use 'modify-phases' syntax. Replace 'system*' with 'invoke'.
2018-03-19gnu: patchelf: Use 'target-arm32?' for armhf-linux case.Efraim Flashner
* gnu/packages/elf.scm (patchelf)[inputs]: Replace armhf-linux detection logic with 'target-arm32?' macro. [arguments]: Same.
2018-03-19gnu: python-paramiko: Update to 2.1.5.Leo Famulari
* gnu/packages/python-crypto.scm (python-paramiko, python2-paramiko): Update to 2.1.5.
2018-03-19gnu: perl-net-ssleay: Update to 1.85.Tobias Geerinckx-Rice
* gnu/packages/tls.scm (perl-net-ssleay): Update to 1.85.
2018-03-19gnu: perl-http-message: Update to 6.15.Tobias Geerinckx-Rice
* gnu/packages/web.scm (perl-http-message): Update to 6.15. [source]: Update URI. [native-inputs]: Add perl-try-tiny.
2018-03-19gnu: r-minimal, r: Update to 3.4.4.Tobias Geerinckx-Rice
There seem to be no dependency updates as far as I could find. * gnu/packages/statistics.scm (r-minimal): Update to 3.4.4.
2018-03-19gnu: python-pynacl: Update to 1.2.0.Leo Famulari
* gnu/packages/python-crypto.scm (python-pynacl): Update to 1.2.0. [native-inputs]: Add python-hypothesis.
2018-03-19gnu: pigx: Update to 0.0.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx): Update to 0.0.2.
2018-03-19gnu: r-rcas: Use ghc-pandoc-citeproc-with-pandoc-1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rcas)[inputs]: Replace ghc-pandoc-citeproc with ghc-pandoc-citeproc-with-pandoc-1.
2018-03-19gnu: bash-completion: Update to 2.8.Tobias Geerinckx-Rice
* gnu/packages/bash.scm (bash-completion): Update to 2.8. * gnu/packages/patches/bash-completion-directories.patch: Update context.
2018-03-19gnu: hdparm: Update to 9.55.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (hdparm): Update to 9.55.
2018-03-19gnu: libtirpc: Update to 1.0.3.Tobias Geerinckx-Rice
* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.3. [source]: Remove patch. * gnu/packages/patches/libtirpc-missing-headers.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2018-03-19gnu: libtirpc: Always return #t from phases.Tobias Geerinckx-Rice
* gnu/packages/onc-rpc.scm (libtirpc)[arguments]: End phase with #t.
2018-03-19gnu: perl-file-basedir: Update to 0.08.Tobias Geerinckx-Rice
* gnu/packages/freedesktop.scm (perl-file-basedir): Update to 0.08.
2018-03-19gnu: enlightenment: Update to 0.22.2.Tobias Geerinckx-Rice
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.2.
2018-03-19gnu: python-oslo.utils: Update to 3.36.0.Tobias Geerinckx-Rice
* gnu/packages/openstack.scm (python-oslo.utils): Update to 3.36.0.
2018-03-19gnu: python-oslo.i18n: Update to 3.20.0.Tobias Geerinckx-Rice
* gnu/packages/openstack.scm (python-oslo.i18n): Update to 3.20.0.
2018-03-19gnu: r-withr: Update to 2.1.2.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-withr): Update to 2.1.2.
2018-03-19gnu: tilda: Update to 1.4.1.Efraim Flashner
* gnu/packages/terminals.scm (tilda): Update to 1.4.1. [arguments]: Rename 'autogen phase to 'bootstrap. Clean up 'bootstrap phase.
2018-03-19gnu: pigx-chipseq: Update to 0.0.8.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.8. [inputs]: Add python-magic, python-xlrd, and trim-galore. [arguments]: Disable tests.
2018-03-19gnu: pigx-scrnaseq: Use pandoc-1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace ghc-pandoc with ghc-pandoc-1, and ghc-pandoc-citeproc with ghc-pandoc-citeproc-with-pandoc-1.
2018-03-19gnu: pigx-bsseq: Use pandoc-1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-bsseq)[inputs]: Replace ghc-pandoc with ghc-pandoc-1, and ghc-pandoc-citeproc with ghc-pandoc-citeproc-with-pandoc-1.
2018-03-19gnu: pigx-chipseq: Use pandoc-1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-chipseq)[inputs]: Replace ghc-pandoc with ghc-pandoc-1, and ghc-pandoc-citeproc with ghc-pandoc-citeproc-with-pandoc-1.
2018-03-19gnu: pigx-rnaseq: Use pandoc-1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-rnaseq)[inputs]: Replace ghc-pandoc with ghc-pandoc-1, and ghc-pandoc-citeproc with ghc-pandoc-citeproc-with-pandoc-1.
2018-03-19gnu: Add ghc-pandoc-citeproc-with-pandoc-1.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-pandoc-citeproc-with-pandoc-1): New variable.
2018-03-18gnu: font-dejavu: Return #t from all phases.Mark H Weaver
* gnu/packages/fonts.scm (font-dejavu)[arguments]: Return #t from the 'install-conf' phase.
2018-03-18gnu: qpdf: Return #t from all phases.Mark H Weaver
* gnu/packages/pdf.scm (qpdf)[arguments]: Return #t from 'patch-paths' phase.
2018-03-18gnu: guile-gdbm-ffi: Add support for gdbm-1.14.Mark H Weaver
* gnu/packages/patches/guile-gdbm-ffi-support-gdbm-1.14.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/guile.scm (guile-gdbm-ffi)[inputs]: Move above arguments. Add the patch, and the 'patch' program. [propagated-inputs]: Move above arguments. [arguments]: In the builder, add code to apply the patch.
2018-03-18gnu: guile-gdbm-ffi: Use 'invoke'.Mark H Weaver
* gnu/packages/guile.scm (guile-gdbm-ffi)[arguments]: Use 'invoke' instead of 'system*'.
2018-03-18gnu: cups: Return #t from all phases.Mark H Weaver
* gnu/packages/cups.scm (cups, cups-minimal): Return #t from all phases.
2018-03-19Merge branch 'master' into stagingMarius Bakke
2018-03-19gnu: Add r-abbyyr.Vijayalakshmi Vedantham
* gnu/packages/cran.scm (r-abbyyr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-03-18gnu: youtube-dl: Update to 2018.03.14.Sohom Bhattacharjee
* gnu/packages/video.scm (youtube-dl): Update to 2018.03.14. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-03-18gnu: wayland: Disable failing tests.Ricardo Wurmus
* gnu/packages/freedesktop.scm (wayland)[arguments]: Disable tests that fail in the build environment.
2018-03-18gnu: shotwell: Update to 0.28.0.Christopher Baines
* gnu/packages/gnome.scm (shotwell): Update to 0.28.0.
2018-03-18gnu: Add ruby-ruby-engine.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-ruby-engine): New variable.
2018-03-18gnu: Add ruby-rake.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-rake): New variable.
2018-03-18gnu: Add ruby-erubis.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-erubis): New variable.
2018-03-18gnu: Add ruby-sporkmonger-rack-mount.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-sporkmonger-rack-mount): New variable.
2018-03-18gnu: Add ruby-creole.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-creole): New variable.
2018-03-18gnu: Add ruby-contest.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-contest): New variable.
2018-03-18gnu: Add ruby-rack-protection.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-rack-protection): New variable.
2018-03-18gnu: Add ruby-rack-test.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-rack-test): New variable.
2018-03-18gnu: Add ruby-asciidoctor.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-asciidoctor): New variable.
2018-03-18gnu: Add ruby-asciimath.Ben Woodcroft
* gnu/packages/maths.scm (ruby-asciimath): New variable.
2018-03-18gnu: gobject-introspection: Disable parallel build.Mark H Weaver
* gnu/packages/glib.scm (gobject-introspection)[arguments]: New field.
2018-03-18gnu: boost: Simplify phases.Mark H Weaver
* gnu/packages/boost.scm (boost)[arguments]: Remove unneeded '#t's from 'configure', 'build', and 'install' phases.
2018-03-17gnu: glib: Return #t from all phases.Mark H Weaver
* gnu/packages/glib.scm (glib)[arguments]: In the 'check' phase, use 'for-each' instead to avoid assuming that 'disable' will return a true value. Return #t from the 'pre-build' and 'check' phases.
2018-03-17gnu: icecat: Fix CVE-2018-{5146,5147}, etc.Mark H Weaver
Includes fixes for CVE-2018-5146 and CVE-2018-5147. * gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr52 repository.
2018-03-17gnu: tk: Return #t from all phases.Mark H Weaver
* gnu/packages/tcl.scm (tk)[arguments]: Return #t from 'pre-configure' phase.
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