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2020-06-22gnu: rust-tempfile-3.1: Rename to rust-tempfile-3....* gnu/packages/crates-io.scm (rust-tempfile-3.1): Rename to ... (rust-tempfile-3): .. this. (rust-cairo-rs-0.8, rust-cairo-rs-0.7, rust-cc-1.0, rust-compiletest-rs-0.3, rust-filetime-0.2, rust-gdk-pixbuf-sys-0.9, rust-gio-sys-0.9, rust-git2-0.11, rust-glib-0.9, rust-glib-0.8, rust-glib-sys-0.9, rust-gobject-sys-0.9, rust-handlebars-2.0, rust-lscolors-0.6, rust-native-tls-0.2, rust-nix-0.15, rust-nix-0.14, rust-no-panic-0.1, rust-pango-sys-0.9, rust-pangocairo-0.10, rust-proptest-0.9, rust-proptest-0.8, rust-rustdoc-stripper-0.1, rust-rustls-0.16, rust-rusty-fork-0.2, rust-sourcefile-0.1, rust-tiff-0.2, rust-tokio-0.2, rust-tokio-fs-0.1, rust-tokio-uds-0.2, rust-wayland-client-0.23, rust-wayland-client-0.21, rust-xattr-0.2) [arguments]: Adjust accordingly. * gnu/packages/rust-apps.scm (rust-cbindgen, tokei)[arguments]: Same. * gnu/packages/sequoia.scm (sequoia)[arguments]: Same. * gnu/packages/terminals.scm (alacritty)[arguments]: Same. Efraim Flashner
2020-06-22gnu: Remove rust-tempfile-3.0....* gnu/packages/crates-io.scm (rust-tempfile-3.0): Remove variable. (rust-compiletest-rs-0.3, rust-filetime-0.2, rust-handlebars-2.0, rust-nix-0.15, rust-nix-0.14, rust-proptest-0.9, rust-proptest-0.8, rust-rustls-0.16, rust-rusty-fork-0.2, rust-tiff-0.2, rust-tokei-fs-0.1, rust-tokio-uds-0.2, rust-xattr-0.2) [arguments]: Replace rust-tempfile-3.0 with 3.1. * gnu/packages/rust-apps.scm (tokei)[arguments]: Same. Efraim Flashner
2020-06-22gnu: rust-proptest-0.9: Update to 0.9.6....* gnu/packages/crates-io.scm (rust-proptest-0.9): Update to 0.9. [arguments]: Don't skip build. In cargo-inputs replace rust-rand-0.4 with 0.6, rust-rand-chacha-0.2 with 0.1, rust-rand-xorshift-0.2 with 0.1. Efraim Flashner
2020-06-22gnu: r-zoo: Move to (gnu packages cran)....* gnu/packages/statistics.scm (r-zoo): Move this variable from here... * gnu/packages/cran.scm (r-zoo): ...to here. Ricardo Wurmus
2020-06-22gnu: r-directlabels: Move to (gnu packages cran)....* gnu/packages/statistics.scm (r-directlabels): Move this variable from here... * gnu/packages/cran.scm (r-directlabels): ...to here. Ricardo Wurmus
2020-06-22gnu: r-boruta: Move to (gnu packages cran)....* gnu/packages/statistics.scm (r-boruta): Move this variable from here... * gnu/packages/cran.scm (r-boruta): ...to here. Ricardo Wurmus
2020-06-22gnu: r-boruta: Fix indentation and description....* gnu/packages/statistics.scm (r-boruta)[description]: Fix indentation, add line breaks, and complete the first sentence fragment. Ricardo Wurmus
2020-06-22gnu: r-fit-models: Update to 0.63....* gnu/packages/statistics.scm (r-fit-models): Update to 0.63. Ricardo Wurmus
2020-06-22gnu: r-glmnet: Update to 4.0-2....* gnu/packages/statistics.scm (r-glmnet): Update to 4.0-2. [propagated-inputs]: Add r-survival. Ricardo Wurmus
2020-06-22gnu: r-rmarkdown: Update to 2.3....* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.3. Ricardo Wurmus
2020-06-22gnu: r-backports: Update to 1.1.8....* gnu/packages/statistics.scm (r-backports): Update to 1.1.8. Ricardo Wurmus
2020-06-22gnu: r-ggplot2: Update to 3.3.2....* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.2. Ricardo Wurmus
2020-06-22gnu: r-isoband: Update to 0.2.2....* gnu/packages/cran.scm (r-isoband): Update to 0.2.2. [propagated-inputs]: Remove r-rcpp. Ricardo Wurmus
2020-06-22gnu: r-zvcv: Update to 2.1.0....* gnu/packages/cran.scm (r-zvcv): Update to 2.1.0. [propagated-inputs]: Remove r-partitions; add r-bh, r-dplyr, r-magrittr, and r-rlinsolve. Ricardo Wurmus
2020-06-22gnu: r-umap: Update to 0.2.6.0....* gnu/packages/cran.scm (r-umap): Update to 0.2.6.0. Ricardo Wurmus
2020-06-22gnu: r-ldheatmap: Update to 0.99-8....* gnu/packages/cran.scm (r-ldheatmap): Update to 0.99-8. Ricardo Wurmus
2020-06-22gnu: r-nonnest2: Update to 0.5-4....* gnu/packages/cran.scm (r-nonnest2): Update to 0.5-4. Ricardo Wurmus
2020-06-22gnu: r-rcppgsl: Update to 0.3.8....* gnu/packages/cran.scm (r-rcppgsl): Update to 0.3.8. [native-inputs]: Remove r-knitr. Ricardo Wurmus
2020-06-22gnu: r-ggeffects: Update to 0.15.0....* gnu/packages/cran.scm (r-ggeffects): Update to 0.15.0. Ricardo Wurmus
2020-06-22gnu: r-bayestestr: Update to 0.7.0....* gnu/packages/cran.scm (r-bayestestr): Update to 0.7.0. Ricardo Wurmus
2020-06-22gnu: r-rstatix: Update to 0.6.0....* gnu/packages/cran.scm (r-rstatix): Update to 0.6.0. [propagated-inputs]: Add r-generics. Ricardo Wurmus
2020-06-22gnu: r-radiant-data: Update to 1.3.9....* gnu/packages/cran.scm (r-radiant-data): Update to 1.3.9. Ricardo Wurmus
2020-06-22gnu: r-tinytex: Update to 0.24....* gnu/packages/cran.scm (r-tinytex): Update to 0.24. Ricardo Wurmus
2020-06-22gnu: r-xfun: Update to 0.15....* gnu/packages/cran.scm (r-xfun): Update to 0.15. Ricardo Wurmus
2020-06-22gnu: r-calibrate: Update to 1.7.7....* gnu/packages/cran.scm (r-calibrate): Update to 1.7.7. Ricardo Wurmus
2020-06-22gnu: r-htmltable: Update to 2.0.0....* gnu/packages/cran.scm (r-htmltable): Update to 2.0.0. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-06-22gnu: r-htmltools: Update to 0.5.0....* gnu/packages/cran.scm (r-htmltools): Update to 0.5.0. [propagated-inputs]: Remove r-rcpp; add r-base64enc. Ricardo Wurmus
2020-06-22gnu: r-v8: Update to 3.2.0....* gnu/packages/cran.scm (r-v8): Update to 3.2.0. Ricardo Wurmus
2020-06-22gnu: r-hdf5array: Update to 1.16.1....* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.16.1. Ricardo Wurmus
2020-06-22gnu: r-rhdf5: Update to 2.32.1....* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.1. Ricardo Wurmus
2020-06-22gnu: r-biomart: Update to 2.44.1....* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.44.1. Ricardo Wurmus
2020-06-22gnu: r-genomeinfodb: Update to 1.24.2....* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.24.2. Ricardo Wurmus
2020-06-22gnu: r-gdsfmt: Update to 1.24.1....* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.24.1. Ricardo Wurmus
2020-06-22gnu: r-cicero: Update to 1.6.1....* gnu/packages/bioconductor.scm (r-cicero): Update to 1.6.1. [propagated-inputs]: Add r-stringi. Ricardo Wurmus
2020-06-22gnu: r-cytoml: Update to 2.0.5....* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.0.5. [propagated-inputs]: Add r-xml2. Ricardo Wurmus
2020-06-22gnu: r-wiggleplotr: Update to 1.12.1....* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.12.1. Ricardo Wurmus
2020-06-22gnu: r-regioner: Update to 1.20.1....* gnu/packages/bioconductor.scm (r-regioner): Update to 1.20.1. Ricardo Wurmus
2020-06-22gnu: Add r-rlinsolve....* gnu/packages/cran.scm (r-rlinsolve): New variable. Ricardo Wurmus
2020-06-22gnu: cuirass: Update to 0.0.1-33-61cc56f6....* gnu/packages/ci.scm (cuirass): Update to 0.0.1-33-61cc56f6. Mathieu Othacehe
2020-06-22gnu: xl2tpd: Fix typo....* gnu/packages/vpn.scm (xl2tpd)[arguments]: Turn "-DPPD" into "-DPPPD". Mathieu Othacehe
2020-06-22gnu: express: Update to 1.5.3....* gnu/packages/bioinformatics.scm (express): Update to 1.5.3. [source]: Fetch from Github. [arguments]: Add phase "remove-update-check". Ricardo Wurmus
2020-06-22gnu: youtube-dl: Update to 2020.06.16....* gnu/packages/video.scm (youtube-dl): Update to 2020.06.16. Tobias Geerinckx-Rice
2020-06-22gnu: vmpk: Update home page....gnu/packages/music.scm (vmpk)[home-page]: Update TLD and use HTTPS. Tobias Geerinckx-Rice
2020-06-22gnu: bison-3.6: Don't change the name of the package....This is a follow-up to commit 512d23c65d82bb874ca1fb3c12095b1cec8bbfca. * gnu/packages/bison (bison-3.6)[name]: Remove the overridden value. Jakub Kądziołka
2020-06-21gnu: linux-libre@4.14: Update to 4.14.185....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.185. (linux-libre-4.14-pristine-source): Update hash. Mark H Weaver
2020-06-21gnu: linux-libre@4.9: Update to 4.9.228....* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.228. (linux-libre-4.9-pristine-source): Update hash. Mark H Weaver
2020-06-21gnu: linux-libre@4.4: Update to 4.4.228....* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.228. (linux-libre-4.4-pristine-source): Update hash. Mark H Weaver
2020-06-21gnu: Add r-boruta....* gnu/packages/statistics.scm (r-boruta): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Peter Lo
2020-06-22gnu: xmoto: Update to 0.6.1....* gnu/packages/games.scm (xmoto): Update to 0.6.1. [arguments]: Remove phase installing man pages, now properly handled by the installation script. Nicolas Goaziou
2020-06-21gnu: emacs-relint: Update to 1.18....* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.18. Nicolas Goaziou