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2022-12-22gnu: ipxe-qemu: Cross-compile on non x86_64....* gnu/packages/bootloaders.scm (ipxe-qemu)[native-inputs]: When not targeting x86_64, add CROSS-GCC and CROSS-BINUTILS. [arguments]: Set CROSS_COMPILE in that case. Marius Bakke
2022-12-22gnu: SeaBIOS: Split QEMU variants out to separate package....* gnu/packages/firmware.scm (seabios)[arguments]: Move custom build and install phases out to ... (seabios-qemu): ... this new variable. * gnu/packages/virtualization.scm (qemu)[inputs]: Change from SEABIOS to SEABIOS-QEMU. Marius Bakke
2022-12-22gnu: QEMU: Don't provide --firmwarepath for user-mode binaries....* gnu/packages/virtualization.scm (qemu)[arguments]: Remove --firmwarepath from the user-mode emulation configure invocation. Marius Bakke
2022-12-22gnu: openvpn: Update to 2.5.8....* gnu/packages/vpn.scm (openvpn): Update to 2.5.8. Efraim Flashner
2022-12-22gnu: Add r-bedtorch....* gnu/packages/bioinformatics.scm (r-bedtorch): New variable. Ricardo Wurmus
2022-12-22gnu: Add r-rhtslib12....* gnu/packages/bioinformatics.scm (r-rhtslib12): New variable. Ricardo Wurmus
2022-12-22gnu: Add wiggletools....* gnu/packages/bioinformatics.scm (wiggletools): New variable. Ricardo Wurmus
2022-12-22gnu: xterm: Update to 377....* gnu/packages/xorg.scm (xterm): Update to 377. Efraim Flashner
2022-12-21gnu: guile-ssh: Update to 0.16.0....* gnu/packages/ssh.scm (guile-ssh): Update to 0.16.0. Vagrant Cascadian
2022-12-22gnu: fheroes2: Update to 1.0.0....* gnu/packages/games.scm (fheroes2): Update to 1.0.0. Andrew Tropin
2022-12-22gnu: Add python-episcanpy....* gnu/packages/bioinformatics.scm (python-episcanpy): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami
2022-12-22gnu: Add python-bamnostic....* gnu/packages/bioinformatics.scm (python-bamnostic): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami
2022-12-21gnu: Add vembrane....* gnu/packages/bioinformatics.scm (vembrane): New variable. Ricardo Wurmus
2022-12-21gnu: python-plastid: Update to 0.6.0....* gnu/packages/bioinformatics.scm (python-plastid): Update to 0.6.0. [source]: Fetch from git repository. [build-system]: Use pyproject-build-system. [arguments]: Enable tests; add build phases 'unpack-test-data and 'build-extensions. [inputs]: Add openssl. [native-inputs]: Add test data. Ricardo Wurmus
2022-12-21gnu: python-pysam: Update to 0.20.0....* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.20.0. [build-system]: Use pyproject-build-system. Ricardo Wurmus
2022-12-21gnu: htslib: Update to 1.16....* gnu/packages/bioinformatics.scm (htslib): Update to 1.16. Ricardo Wurmus
2022-12-21gnu: pbbam: Use htslib 1.14....* gnu/packages/bioinformatics.scm (pbbam)[propagated-inputs]: Replace htslib with htslib-1.14. Ricardo Wurmus
2022-12-21gnu: Add htslib-1.14....* gnu/packages/bioinformatics.scm (htslib-1.14): New variable. Ricardo Wurmus
2022-12-21gnu: Add ocaml5.0-merlin....* gnu/packages/ocaml.scm (ocaml5.0-merlin): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-dot-merlin-reader....* gnu/packages/ocaml.scm (ocaml5.0-dot-merlin-reader): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-merlin-lib....* gnu/packages/ocaml.scm (ocaml5.0-merlin-lib): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Update ocaml-merlin-lib to 4.7-414....* gnu/packages/ocaml.scm (ocaml-merlin-lib): Update to 4.7-414. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-eio-main....* gnu/packages/ocaml.scm (ocaml5.0-eio-main): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-eio-linux....* gnu/packages/ocaml.scm (ocaml5.0-eio-linux): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-uring....* gnu/packages/ocaml.scm (ocaml-uring): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-eio-luv....* gnu/packages/ocaml.scm (ocaml5.0-eio-luv): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-eio....* gnu/packages/ocaml.scm (ocaml5.0-eio): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: ocaml-mdx: Move inputs to propagated-inputs....* gnu/packages/ocaml.scm (ocaml-mdx): Move inputs to propagated-inputs. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-bechamel....* gnu/packages/ocaml.scm (ocaml-bechamel): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-ctypes...* gnu/packages/ocaml.scm (ocaml5.0-ctypes): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-lwt-dllist....* gnu/packages/ocaml.scm (ocaml-lwt-dllist): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-crowbar....* gnu/packages/ocaml.scm (ocaml5.0-crowbar): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Update ocaml-odoc to 2.2.0....* gnu/packages/ocaml.scm (ocaml-odoc): Update to 2.2.0. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-ppx-expect....* gnu/packages/ocaml.scm (ocaml5.0-ppx-expect): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Update ocaml-qcheck to 0.20....* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.20. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Update ocaml-ppxlib to 0.25.1....* gnu/packages/ocaml.scm (ocaml-ppxlib): Update to 0.25.1. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-base....* gnu/packages/ocaml.scm (ocaml5.0-base): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-hmap....* gnu/packages/ocaml.scm (ocaml-hmap): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-optint....* gnu/packages/ocaml.scm (ocaml-optint): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-monolith....* gnu/packages/ocaml.scm (ocaml-monolith): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-psq....* gnu/packages/ocaml.scm (ocaml-psq): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: opam: Use OCaml 4.14 compiled version when building OCaml 5.0 packages....* gnu/packages/ocaml.scm (opam)[properties]: Add ocaml5.0-variant. (opam)[propagated-inputs]: Move to inputs. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21guix: ocaml: Add package-with-ocaml5.0....* guix/build-system/ocaml.scm (package-with-ocaml5.0) (strip-ocaml5.0-variant): New variables. * gnu/packages/ocaml.scm (ocaml5.0-dune-bootstrap) (ocaml5.0-dune, ocaml5.0-dune-configurator) (ocaml5.0-csexp, ocaml5.0-result): New variables. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml5.0-findlib...* gnu/packages/ocaml.scm (ocaml5.0-findlib): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: ocaml-findlib: Update to 1.9.5....* gnu/packages/ocaml.scm (ocaml-findlib): Update to 1.9.5. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: Add ocaml-5.0....* gnu/packages/ocaml.scm (ocaml-5.0): New variable. Signed-off-by: Julien Lepiller <julien@lepiller.eu> pukkamustard
2022-12-21gnu: julia-imagemetadata: Update to 0.9.8....* gnu/packages/julia-xyz.scm (julia-imagemetadata): Update to 0.9.8. [arguments]: Add phase to skip greyscale test. [propagated-inputs]: Remove julia-indirectarrays; add julia-imagebase. [native-inputs]: Add julia-indirectarrays. Efraim Flashner
2022-12-21gnu: julia-paddedviews: Update to 0.5.11....* gnu/packages/julia-xyz.scm (julia-paddedviews): Update to 0.5.11. Efraim Flashner
2022-12-21gnu: julia-imageaxes: Update to 0.6.10....* gnu/packages/julia-xyz.scm (julia-imageaxes): Update to 0.6.10. [arguments]: Add a phase to skip a greyscale test. [propagated-inputs]: Add julia-imagebase. [native-inputs]: Add julia-aqua and julia-documenter. Efraim Flashner
2022-12-21gnu: julia-graphics: Update to 1.1.2....* gnu/packages/julia-xyz.scm (julia-graphics): Update to 1.1.2. Efraim Flashner
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