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2019-06-29gnu: r-genomicfeatures: Update to 1.36.3....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.3. Ricardo Wurmus
2019-06-29gnu: r-genomicalignments: Update to 1.20.1....* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.1. Ricardo Wurmus
2019-06-29gnu: r-biomart: Update to 2.40.1....* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.1. Ricardo Wurmus
2019-06-29gnu: r-edger: Update to 3.26.5....* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.5. Ricardo Wurmus
2019-06-29gnu: r-systempiper: Update to 1.18.2....* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.2. Ricardo Wurmus
2019-06-29gnu: r-rsubread: Update to 1.34.4....* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.4. Ricardo Wurmus
2019-06-29gnu: r-genomicscores: Update to 1.8.1....* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.1. Ricardo Wurmus
2019-06-29gnu: r-dose: Update to 3.10.2....* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.2. Ricardo Wurmus
2019-06-28gnu: python-llvmlite: Build against LLVM 7....This is a follow-up to commit c5296e205b65a9b53553cf45be2ab223d5e82df5. * gnu/packages/llvm.scm (llvm-7, clang-runtime-7, clang-7): New public variables. (python-llvmlite)[inputs]: Inherit from LLVM-7 instead of LLVM. Marius Bakke
2019-06-28gnu: Add beets-bandcamp....* gnu/packages/music.scm (beets-bandcamp): New variable. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr> Jakob L. Kreuze
2019-06-28gnu: musescore: Update to 3.2....* gnu/packages/music.scm (musescore): Update to 3.2. Nicolas Goaziou
2019-06-28gnu: snap: Update to 5....* gnu/packages/education.scm (snap): Update to 5. Nicolas Goaziou
2019-06-28gnu: atlas: All phases return #t....* gnu/packages/maths.scm (atlas)[arguments]: Ensure all custom phases return #t. Efraim Flashner
2019-06-28gnu: krita: Update to 4.2.2....* gnu/packages/kde.scm (krita): Update to 4.2.2. [source]: Don't use NAME in source URI. [arguments]: Remove obsolete configure flags. [native-inputs]: Add pkg-config. [inputs]: Add quazip, reorder alphabetically. Nicolas Goaziou
2019-06-28gnu: Add quazip....* gnu/packages/compression.scm (quazip): New variable. Nicolas Goaziou
2019-06-27gnu: linux-libre@4.14: Update to 4.14.131....* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.131. (%linux-libre-4.14-hash): Update hash. Mark H Weaver
2019-06-27gnu: linux-libre@4.9: Update to 4.9.184....* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.184. Mark H Weaver
2019-06-27gnu: linux-libre@4.4: Update to 4.4.184....* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.184. Mark H Weaver
2019-06-27gnu: pigx-scrnaseq: Update to 0.0.8....* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 0.0.8. Ricardo Wurmus
2019-06-27gnu: mame: Update to 0.211....* gnu/packages/emulators.scm (mame): Update to 0.211. Rutger Helling
2019-06-27packages: 'specification->package+output' distinguishes "no output specified"....Until now the caller couldn't tell the different between a spec like "foo:out" and one like "foo". This change allows users to distinguish between these two cases. * gnu/packages.scm (specification->package+output): Disable output membership test when OUTPUT = #f and SUB-DRV = #f. * tests/packages.scm ("specification->package+output") ("specification->package+output invalid output") ("specification->package+output no default output") ("specification->package+output invalid output, no default"): New tests. Ludovic Courtès
2019-06-27accounts: Use 'fsync' instead of 'fdatasync'....* gnu/build/accounts.scm (catch-ENOSYS): Remove. (database-writer): Use 'fsync' instead of 'fdatasync'. Ludovic Courtès
2019-06-27gnu: dosbox: Update to 0.74-3....* gnu/packages/emulators.scm (dosbox): Update to 0.74-3. Rutger Helling
2019-06-27gnu: rep-gtk: Update to 0.90.8.3....* gnu/packages/sawfish.scm (rep-gtk): Update to 0.90.8.3. [source]: Use HTTPS URI. [arguments]: Add remove-autogen phase. [native-inputs]: Add autoconf, automake and libtool. [home-page]: Update URI. Arun Isaac
2019-06-27gnu: sawfish: Update to 1.12.0....* gnu/packages/sawfish.scm (sawfish): Update to 1.12.0. [source]: Use HTTPS URI. [home-page]: Update URI. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> Benjamin Slade
2019-06-26gnu: electron-cash: Update to 4.0.7....* gnu/packages/finance (electron-cash): Update to 4.0.7. Vagrant Cascadian
2019-06-27Revert "gnu: openssh: Don't create the PRIVSEP_PATH directory."...This reverts commit 46475f72ab6127e7818fdea4a0ea9cc07c60a5f4. Tobias Geerinckx-Rice
2019-06-27Revert "gnu: openssh: Clean-up custom install phase."...This reverts commit 7754136e464e02284624ad05c196d9ec26099143. Tobias Geerinckx-Rice
2019-06-26gnu: supertux: Fix homepage....* gnu/packages/games.scm (supertux)[homepage]: Fix URL. Nicolas Goaziou
2019-06-26gnu: Add texmacs....* gnu/packages/text-editors.scm (texmacs): New variable. Andreas Enge
2019-06-26gnu: python-pathpy: Update to 11.5.0....* gnu/packages/python-xyz.scm (python-pathpy): Update to 11.5.0. [outputs]: Add separate "doc" output. [native-inputs]: Add python-jaraco-packaging. [arguments]: Enable tests; uncomment "build-doc" and "install-doc" phases; replace "check" phase to skip flaky test. Ricardo Wurmus
2019-06-26gnu: Add python-jaraco-packaging....* gnu/packages/python-xyz.scm (python-jaraco-packaging): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-pytest-virtualenv....* gnu/packages/python-check.scm (python-pytest-virtualenv): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-pytest-fixture-config....* gnu/packages/python-check.scm (python-pytest-fixture-config): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-pytest-shutil....* gnu/packages/python-check.scm (python-pytest-shutil): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-pytest-flake8....* gnu/packages/python-check.scm (python-pytest-flake8): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-pytest-checkdocs....* gnu/packages/python-check.scm (python-pytest-checkdocs): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-importlib-metadata....* gnu/packages/python-xyz.scm (python-importlib-metadata): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-zipp....* gnu/packages/python-compression.scm (python-zipp): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-setuptools-git....* gnu/packages/python-xyz.scm (python-setuptools-git): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-contextlib2....* gnu/packages/python-xyz.scm (python-contextlib2): New variable. Ricardo Wurmus
2019-06-26gnu: Add python-pathlib2....* gnu/packages/python-xyz.scm (python-pathlib2): New variable. Ricardo Wurmus
2019-06-26gnu: Add mesa-opencl-icd....* gnu/packages/gl.scm (mesa-opencl-icd): New variable. Ricardo Wurmus
2019-06-26gnu: Add mesa-opencl....* gnu/packages/gl.scm (mesa-opencl): New variable. Ricardo Wurmus
2019-06-26gnu: Add libclc....* gnu/packages/llvm.scm (libclc): New variable. Ricardo Wurmus
2019-06-26gnu: libcxx: Update hash....This is a follow-up to commit c5296e205b65a9b53553cf45be2ab223d5e82df5, which updated llvm. * gnu/packages/llvm.scm (libcxx): Update hash. Ricardo Wurmus
2019-06-26gnu: Add gramps...* gnu/packages/genealogy.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Guillaume LE VAILLANT
2019-06-26gnu: Add osm-gps-map...* gnu/packages/geo.scm (osm-gps-map): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Guillaume LE VAILLANT
2019-06-26gnu: Add python-bsddb3...* gnu/packages/python-xyz.scm (python-bsddb3): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Guillaume LE VAILLANT
2019-06-26gnu: python-on-guile: Wrap 'python' executable....* gnu/packages/guile-xyz.scm (python-on-guile)[arguments]: Add 'wrap' phase. Ludovic Courtès
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