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2018-10-05gnu: filezilla: Update to 3.37.4....* gnu/packages/ftp.scm (filezilla): Update to 3.37.4. Tobias Geerinckx-Rice
2018-10-05gnu: libfilezilla: Update to 0.14.0....* gnu/packages/ftp.scm (libfilezilla): Update to 0.14.0. Tobias Geerinckx-Rice
2018-10-05gnu: samtools-0.1: Adjust to match changes in samtools....* gnu/packages/bioinformatics.scm (samtools-0.1)[arguments]: Override make flags. Ricardo Wurmus
2018-10-05gnu: deeptools: Update to 3.1.2....* gnu/packages/bioinformatics.scm (deeptools): Update to 3.1.2. [source]: Fetch from git. [arguments]: Delete reset-gzip-timestamps phase. [inputs]: Add python-plotly. Ricardo Wurmus
2018-10-05gnu: python-pysam: Update to 0.15.1....* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.15.1. [source]: Fetch from git. [arguments]: Delete tests requiring internet access; use "invoke". [inputs]: Add curl. Ricardo Wurmus
2018-10-05gnu: python-plotly: Add python-pandas to inputs....* gnu/packages/graph.scm (python-plotly)[propagated-inputs]: Add python-pandas. Ricardo Wurmus
2018-10-05gnu: bcftools: Update to 1.9....* gnu/packages/bioinformatics.scm (bcftools): Update to 1.9. [arguments]: Remove obsolete make flags. Ricardo Wurmus
2018-10-05gnu: samtools: Update to 1.9....* gnu/packages/bioinformatics.scm (samtools): Update to 1.9. [origin]: Remove bundled htslib sources. [arguments]: Remove obsolete make-flags. Ricardo Wurmus
2018-10-05gnu: htslib: Update to 1.9....* gnu/packages/bioinformatics.scm (htslib): Update to 1.9. Ricardo Wurmus
2018-10-04gnu: icecat: Add fixes from mozilla-esr60 [security fixes]....Includes fixes for CVE-2018-12386 and CVE-2018-12387. * gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr60 repository. Mark H Weaver
2018-10-04gnu: linux-libre: Update to 4.18.12....* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.12. (%linux-libre-hash): Update hash. Mark H Weaver
2018-10-04gnu: linux-libre@4.14: Update to 4.14.74....* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.74. (%linux-libre-4.14-hash): Update hash. Mark H Weaver
2018-10-04gnu: linux-libre@4.9: Update to 4.9.131....* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.131. Mark H Weaver
2018-10-04gnu: petsc-openmpi: Configure with support for MUMPS solver....* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add metis, mumps-openmpi, scalapack and pt-scotch. [arguments]: Add "--with-PACKAGENAME=1" flags. Move 'mpi-setup' phase ahead of 'configure' phase. Signed-off-by: Leo Famulari <leo@famulari.name> Paul Garlick
2018-10-04gnu: hiawatha: Set sane run-time directory defaults....* gnu/packages/web.scm (hiawatha)[arguments]: Set sane default directories. Replace the 'remove-empty-dirs' phase with a 'install-no-empty-directories' one. Tobias Geerinckx-Rice
2018-10-04gnu: hwloc: Update to 2.0.2....* gnu/packages/mpi.scm (hwloc): Update to 2.0.2. Tobias Geerinckx-Rice
2018-10-04gnu: Add nsd....* gnu/packages/dns.scm (nsd): New public variable. Tobias Geerinckx-Rice
2018-10-04gnu: guile-next: Update to commit 6f3357b0df64c4be17e72079864c09a542f1c779....* gnu/packages/guile.scm (guile-next): Update to commit 6f3357b0df64c4be17e72079864c09a542f1c779. David Thompson
2018-10-04gnu: guile-next: Add the correct native search paths....* gnu/packages/guile.scm (guile-next): Add native search paths for version 3.0. David Thompson
2018-10-04gnu: hiawatha: Support HTTP/2....* gnu/packages/web.sck (hiawatha)[arguments]: USE_SYSTEM_NGHTTP2 to ENABLE_HTTP2. [inputs]: Add nghttp2:lib. Tobias Geerinckx-Rice
2018-10-04gnu: hiawatha: Update to 10.8.3....* gnu/packages/web.scm (hiawatha): Update to 10.8.3. [source]: Also delete bundled copy of nghttp2. [inputs]: Use mbedtls-for-hiawatha instead of vanilla mbedtls-apache. * gnu/packages/tls.scm (mbedtls-for-hiawatha): New public variable. Tobias Geerinckx-Rice
2018-10-04gnu: mbedtls-apache: Update to 2.13.0 [security fixes]....* gnu/packages/tls.scm (mbedtls-apache): Update to 2.13.0. [native-inputs]: Add python. Tobias Geerinckx-Rice
2018-10-04gnu: geos: Update to 3.7.0....* gnu/packages/geo.scm (geos): Update to 3.7.0. Arun Isaac
2018-10-04gnu: hexedit: Update to 1.4.2....* gnu/packages/hexedit.scm (hexedit): Update to 1.4.2. [source]: Use the author's more up-to-date git repository. [native-inputs]: Add autoconf and automake. Tobias Geerinckx-Rice
2018-10-04gnu: html-xml-utils: Update to 7.7....* gnu/packages/xml.scm (html-xml-utils): Update to 7.7. Tobias Geerinckx-Rice
2018-10-04gnu: perl-xml-feed: Update to 0.54....* gnu/packages/xml.scm (perl-xml-feed): Update to 0.54. Tobias Geerinckx-Rice
2018-10-04gnu: guix: Update to 1d0be47....* gnu/packages/package-management.scm (guix): Update to 1d0be47. Ludovic Courtès
2018-10-04gnu: escpr: Update to 1.6.30....* gnu/packages/cups.scm (escpr): Update to 1.6.30. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Diego Nicola Barbato
2018-10-04gnu: opencv: Update to 3.4.3....[[PGP Signed Part:Good signature from BF286CB6593E5FFD Björn Höfling <bjoern.hoefling@bjoernhoefling.de> (trust undefined) created at 2018-10-03T22:28:20+0200 using DSA]] * gnu/packages/image-processing.scm (opencv): Update to 3.4.3. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Björn Höfling
2018-10-04gnu: r-acclma: Fix uses of @acronym in description....* gnu/packages/cran.scm (r-acclma)[description]: Fix order of arguments to @acronym. The wrong order was causing 'stexi->shtml' to fail (match error). Ludovic Courtès
2018-10-04services: rottlog: Use command strings in the mcron jobs....* gnu/services/admin.scm (default-jobs): Remove the lambda around "/…/bin/rottlog" to make "herd schedule mcron" more transparent (otherwise it just says "Lambda function"). Ludovic Courtès
2018-10-04gnu: mpv: Update to 0.29.1....* gnu/packages/video.scm (mpv): Update to 0.29.1. Rutger Helling
2018-10-04gnu: retroarch: Update to 1.7.5....* gnu/packages/emulators.scm (retroarch): Update to 1.7.5. Tobias Geerinckx-Rice
2018-10-04gnu: retroarch: Don't use unstable tarball....* gnu/packages/emulators.scm (retroarch)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice
2018-10-04gnu: ephoto: Fix typos in description....* gnu/packages/enlightenment.scm (ephoto)[description]: Fix typos. Wrap at 80 columns. Tobias Geerinckx-Rice
2018-10-04gnu: perl-string-copyright: Update to 0.003006....* gnu/packages/license.scm (perl-string-copyright): Update to 0.003006. Tobias Geerinckx-Rice
2018-10-04gnu: rpm: Update to 4.14.2....* gnu/packages/package-management.scm (rpm): Update to 4.14.2. [arguments]: Rename 'set-nspr-search-path' phase to 'set-nss-library-path' and remove CPATH work-around. Remove obsolete 'fix-rpm-symlinks' phase. [home-page]: Drop www. Tobias Geerinckx-Rice
2018-10-04gnu: imapfilter: Update to 2.6.12....* gnu/packages/mail.scm (imapfilter): Update to 2.6.12. Tobias Geerinckx-Rice
2018-10-04gnu: imapfilter: Don't use unstable tarball....* gnu/packages/mail.scm (imapfilter)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice
2018-10-04gnu: nickle: Update to 2.82....* gnu/packages/nickle.scm (nickle): Update to 2.82. Tobias Geerinckx-Rice
2018-10-04gnu: ddcutil: Update to 0.9.2....* gnu/packages/hardware.scm (ddcutil): Update to 0.9.2. Tobias Geerinckx-Rice
2018-10-04gnu: ndctl: Return #t from phases....* gnu/packages/disk (ndctl)[arguments]: Rename inaccurately named 'autogen' phase to 'patch-FHS-file-names'. Explicitly return #t. Tobias Geerinckx-Rice
2018-10-04gnu: disorderfs: Update to 0.5.4....* gnu/packages/file-systems.scm (disorderfs): Update to 0.5.4. Tobias Geerinckx-Rice
2018-10-04gnu: packagekit: Update to 1.1.11....* gnu/packages/freedesktop.scm (packagekit): Update to 1.1.11. Tobias Geerinckx-Rice
2018-10-04gnu: Add freedroidrpg....* gnu/packages/games.scm (freedroidrpg): New public variable. Tobias Geerinckx-Rice
2018-10-04gnu: wpa-supplicant-gui: Remove redundant code....* gnu/packages/admin.scm (wpa-supplicant-gui)[arguments]: Remove substitution already handled by the build system. Tobias Geerinckx-Rice
2018-10-04gnu: rubberband: Use HTTPS home page....* gnu/packages/audio.scm (rubberband)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2018-10-04gnu: Add memtester....* gnu/packages/hardware.scm (memtester): New public variable. Tobias Geerinckx-Rice
2018-10-04gnu: Add memtest86+....* gnu/packages/hardware.scm (memtest86+): New public variable. Tobias Geerinckx-Rice
2018-10-04gnu: rtags: Don't use unstable tarball....* gnu/packages/code.scm (rtags)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice
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