summaryrefslogtreecommitdiff
path: root/gnu
AgeCommit message (Expand)Author
2022-05-31gnu: Remove python2-neo4j-driver....* gnu/packages/databases.scm (python2-neo4j-driver): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove nmoldyn....* gnu/packages/chemistry.scm (nmoldyn): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove domainfinder....* gnu/packages/chemistry.scm (domainfinder): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-nose-randomly....* gnu/packages/check.scm (python2-nose-randomly): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pytest-subtesthack....* gnu/packages/check.scm (python2-pytest-subtesthack): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pytest-flakes....* gnu/packages/check.scm (python2-pytest-flakes): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-cov-core....* gnu/packages/check.scm (python2-cov-core): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-discover....* gnu/packages/check.scm (python2-discover): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-flexmock....* gnu/packages/check.scm (python2-flexmock): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-minimock....* gnu/packages/check.scm (python2-minimock): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-rednose....* gnu/packages/check.scm (python2-rednose): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-python-paramunittest....* gnu/packages/check.scm (python2-python-paramunittest): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pytest-capturelog....* gnu/packages/check.scm (python2-pytest-capturelog): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-nose2....* gnu/packages/check.scm (python2-nose2): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-testlib....* gnu/packages/check.scm (python2-testlib): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pytest-catchlog....* gnu/packages/check.scm (python2-pytest-catchlog): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-nose-timer....* gnu/packages/check.scm (python2-nose-timer): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove transmission-remote-cli....* gnu/packages/bittorrent.scm (transmission-remote-cli): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove pyicoteo....* gnu/packages/bioinformatics.scm (pyicoteo): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pbcore....* gnu/packages/bioinformatics.scm (python2-pbcore): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pyfaidx....* gnu/packages/bioinformatics.scm (python2-pyfaidx): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-screed....* gnu/packages/bioinformatics.scm (python2-screed): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove miso....* gnu/packages/bioinformatics.scm (miso): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-warpedlmm....* gnu/packages/bioinformatics.scm (python2-warpedlmm): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove poretools....* gnu/packages/bioinformatics.scm (poretools): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-dendropy....* gnu/packages/bioinformatics.scm (python2-dendropy): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove bamm....* gnu/packages/bioinformatics.scm (bamm): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pybedtools....* gnu/packages/bioinformatics.scm (python2-pybedtools): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-htseq....* gnu/packages/bioinformatics.scm (python2-htseq): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove pepr....* gnu/packages/bioinformatics.scm (pepr): Delete variable. Maxim Cournoyer
2022-05-31gnu: tetoolkit: Update to 2.2.1b....* gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b. [python]: Delete argument. [phases]: Delete trailing #t. {make-writable}: Delete phase. {adjust-requirements}: New phase. {patch-invocations}: Use search-input-file. {wrap-program}: Use search-input-file. [inputs]: Remove python2-argparse. Replace python2-pysam with python-pysam. [home-page]: Update URL. Maxim Cournoyer
2022-05-31gnu: Remove python2-pybigwig....* gnu/packages/bioinformatics.scm (python2-pybigwig): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove ribodiff....* gnu/packages/bioinformatics.scm (ribodiff): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove grit....* gnu/packages/bioinformatics.scm (grit): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-fastalite....* gnu/packages/bioinformatics.scm (python2-fastalite): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pyaudio....* gnu/packages/audio.scm (python2-pyaudio): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove raul-devel....* gnu/packages/audio.scm (raul-devel): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove raul....* gnu/packages/audio.scm (raul): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove ingen....* gnu/packages/music.scm (ingen): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pyalsaaudio....* gnu/packages/audio.scm (python2-pyalsaaudio): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove graphios....* gnu/packages/admin.scm (graphios): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-langkit....* gnu/packages/ada.scm (python2-langkit): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python-pytest-runner-2....* gnu/packages/check.scm (python-pytest-runner-2): Delete variable. (python2-pytest-runner): Likewise. Maxim Cournoyer
2022-05-31gnu: icecat: Update to 91.10.0-guix0-preview1 [security fixes]....Includes fixes for CVE-2022-31736, CVE-2022-31737, CVE-2022-31738, CVE-2022-31739, CVE-2022-31740, CVE-2022-31741, CVE-2022-31742, and CVE-2022-31747. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. Mark H Weaver
2022-05-31gnu: ungoogled-chromium: Update to 102.0.5005.61-3....* gnu/packages/chromium.scm (%ungoogled-revision): Bump to latest. (%ungoogled-origin): Update hash. Marius Bakke
2022-05-31gnu: python-sip-4: Update to 4.19.25....* gnu/packages/qt.scm (python-sip-4): Update to 4.19.25. Efraim Flashner
2022-05-31gnu: guile-ac-d-bus: Run test suite....* gnu/packages/patches/guile-ac-d-bus-fix-tests.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/guile-xyz.scm (guile-ac-d-bus) [source]: Apply patch. [phases]{check}: New phase. [native-inputs]: Add bash-minimal. Maxim Cournoyer
2022-05-31gnu: guile-ac-d-bus: Build and install info manual....* gnu/packages/guile-xyz.scm (guile-ac-d-bus) [arguments]: Use gexps. [phases]{build-doc, install-doc}: New phases. [native-inputs]: Add texinfo. Maxim Cournoyer
2022-05-31gnu: python-distributed: Update to 2022.05.2....* gnu/packages/python-science.scm (python-distributed): Update to 2022.05.2. [arguments]: Remove 'sanity-check phase; adjust 'check phase. [propagated-inputs]: Add python-urllib3. [native-inputs]: Add python-pytest-timeout and python-flaky. Ricardo Wurmus
2022-05-31gnu: r-haven: Fix build....* gnu/packages/cran.scm (r-haven)[arguments]: Adjust 'unbundle-readstat phase. Reported-by: Jonas Freimuth. Ricardo Wurmus