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2018-04-06gnu: sambamba: Update to 0.6.7-10-g223fa20.•••* gnu/packages/bioinformatics.scm (sambamba)[source]: Fetch from git. [arguments]: Disable parallel build; rename build phase "place-biod" to "place-biod-and-undead"; add build phase "fix-ldc-version"; adjust phase "unbundle-prerequisites". [native-inputs]: Add python2-minimal; update biod sources; add undead sources. Ricardo Wurmus
2018-04-06gnu: htslib-for-sambamba: Fix build.•••* gnu/packages/bioinformatics.scm (htslib-for-sambamba)[arguments]: Do not inherit htslib arguments. Ricardo Wurmus
2018-04-05gnu: certbot: Update to 0.23.0.•••* gnu/packages/tls.scm (certbot, python-acme): Update to 0.23.0. Leo Famulari
2018-04-05gnu: Add java-native-access-platform.•••* gnu/packages/java.scm (java-native-access-platform): New variable. Julien Lepiller
2018-04-05gnu: Add java-native-access.•••* gnu/packages/java.scm (java-native-access): New variable. Julien Lepiller
2018-04-05gnu: Add java-jakarta-oro.•••* gnu/packages/java.scm (java-jakarta-oro): New variable. Julien Lepiller
2018-04-05gnu: Add java-commons-vfs.•••* gnu/packages/java.scm (java-commons-vfs): New variable. Julien Lepiller
2018-04-05gnu: Add java-commons-httpclient.•••* gnu/packages/java.scm (java-commons-httpclient): New variable. Julien Lepiller
2018-04-05gnu: Add java-commons-bsf.•••* gnu/packages/java.scm (java-commons-bsf): New variable. Julien Lepiller
2018-04-05gnu: Update java-commons-cli to 1.4.•••* gnu/packages/java.scm (java-commons-cli): Update to 1.4. Julien Lepiller
2018-04-05gnu: Add java-jline-2.•••* gnu/packages/java.scm (java-jline-2): New variable. Julien Lepiller
2018-04-05gnu: openssh: Update to 7.7p1.•••* gnu/packages/ssh.scm (openssh): Update to 7.7p1. [arguments]: Set the test suite's working directory in #:make-flags. Leo Famulari
2018-04-05gnu: tiled: Update to 1.1.4.•••* gnu/packages/game-development.scm (tiled): Update to 1.1.4. David Thompson
2018-04-05gnu: Add subdl.•••* gnu/packages/video.scm (subdl): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Pierre Neidhardt
2018-04-05gnu: iptables: Remove trailing newline from description.•••...introduced in be5dc5fb18a4b72977748c5f077062be4e8accbc. * gnu/packages/linux.scm (iptables)[description]: Remove trailing newline. Tobias Geerinckx-Rice
2018-04-05gnu: perl-db-file: Update to 1.841.•••* gnu/packages/databases.scm (perl-db-file): Update to 1.841. Tobias Geerinckx-Rice
2018-04-05gnu: licensecheck: Update to 3.0.34.•••* gnu/packages/license.scm (licensecheck): Update to 3.0.34. Tobias Geerinckx-Rice
2018-04-05gnu: cppcheck: Update to 1.83.•••* gnu/packages/check.scm (cppcheck): Update to 1.83. Tobias Geerinckx-Rice
2018-04-05gnu: gama: Update to 1.22.•••* gnu/packages/gps.scm (gama): Update to 1.22. Tobias Geerinckx-Rice
2018-04-05gnu: lmdb: Update to 0.9.22.•••* gnu/packages/databases.scm (lmdb): Update to 0.9.22. Tobias Geerinckx-Rice
2018-04-05gnu: getmail: Update to 5.6.•••* gnu/packages/mail.scm (getmail): Update to 5.6. Tobias Geerinckx-Rice
2018-04-05gnu: jpegoptim: Use HTTPS home page.•••* gnu/packages/image.scm (jpegoptim)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2018-04-05gnu: jpegoptim: Update to 1.4.5.•••* gnu/packages/image.scm (jpegoptim): Update to 1.4.5. Tobias Geerinckx-Rice
2018-04-05gnu: debootstrap: Update to 1.0.95.•••* gnu/packages/debian.scm (debootstrap): Update to 1.0.95. Tobias Geerinckx-Rice
2018-04-05gnu: czmq: Update to 4.1.1.•••* gnu/packages/networking.scm (czmq): Update to 4.1.1. Tobias Geerinckx-Rice
2018-04-05gnu: musescore: Update to 2.2.1.•••* gnu/packages/music.scm (musescore): Update to 2.2.1. Tobias Geerinckx-Rice
2018-04-05gnu: mate-themes: Update to 3.22.16.•••* gnu/packages/mate.scm (mate-themes): Update to 3.22.16. Tobias Geerinckx-Rice
2018-04-05gnu: asymptote: Update to 2.42.•••* gnu/packages/plotutils.scm (asymptote): Update to 2.42. Tobias Geerinckx-Rice
2018-04-05gnu: Use HTTPS for statnet.org home pages.•••* gnu/packages/cran.scm (r-network, r-statnet-common, r-sna)[home-page]: Use HTTPS and canonical domain name. Tobias Geerinckx-Rice
2018-04-05gnu: r-network: Update to 1.13.0.1.•••* gnu/packages/cran.scm (r-network): Update to 1.13.0.1. Tobias Geerinckx-Rice
2018-04-05gnu: r-lmtest: Update to 0.9-36.•••* gnu/packages/cran.scm (r-lmtest): Update to 0.9-36. Tobias Geerinckx-Rice
2018-04-05gnu: r-broom: Update to 0.4.4.•••* gnu/packages/cran.scm (r-broom): Update to 0.4.4. Tobias Geerinckx-Rice
2018-04-05gnu: r-ggthemes: Update to 3.4.2.•••* gnu/packages/statistics.scm (r-ggthemes): Update to 3.4.2. Tobias Geerinckx-Rice
2018-04-05gnu: r-caret: Update to 6.0-79.•••* gnu/packages/statistics.scm (r-caret): Update to 6.0-79. Tobias Geerinckx-Rice
2018-04-05gnu: r-viridis: Update to 0.5.1.•••* gnu/packages/statistics.scm (r-viridis): Update to 0.5.1. Tobias Geerinckx-Rice
2018-04-05gnu: r-matrix: Update to 1.2-13.•••* gnu/packages/statistics.scm (r-matrix): Update to 1.2-13. Tobias Geerinckx-Rice
2018-04-05gnu: r-cluster: Update to 2.0.7.•••* gnu/packages/statistics.scm (r-cluster): Update to 2.0.7. Tobias Geerinckx-Rice
2018-04-05gnu: r-glmnet: Update to 2.0-16.•••* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-16. Tobias Geerinckx-Rice
2018-04-05gnu: python-gst: Update to 1.12.5.•••* gnu/packages/gstreamer.scm (python-gst): Update to 1.12.5. Tobias Geerinckx-Rice
2018-04-05gnu: sshuttle: Update to 0.78.4.•••* gnu/packages/vpn.scm (sshuttle): Update to 0.78.4. Tobias Geerinckx-Rice
2018-04-05gnu: nginx-documentation: Update to 2018-04-04-2131-dbaf3950f8e9.•••* gnu/packages/web.scm (nginx-documentation): Update to 2018-04-04-2131-dbaf3950f8e9. Tobias Geerinckx-Rice
2018-04-05gnu: nginx: Update to 1.13.11.•••* gnu/packages/web.scm (nginx): Update to 1.13.11. Tobias Geerinckx-Rice
2018-04-04gnu: xapers: Fix man page and xapers-adder installation•••* gnu/packages/search.scm (xapers)[arguments]: Adjust install-file destinations in install-doc phase. Signed-off-by: Eric Bavier <bavier@member.fsf.org> Adam Massmann
2018-04-04gnu: syncthing: Update to 0.14.46.•••* gnu/packages/syncthing.scm (syncthing): Update to 0.14.46. Leo Famulari
2018-04-04gnu: go-github-com-zillode-notify: Update to 0.0.0-3.53dd687.•••* gnu/packages/syncthing.scm (go-github-com-zillode-notify): Update to 0.0.0-3.53dd687. [source]: Update URL. [arguments]: Update #:import-path. Leo Famulari
2018-04-04system: Add default '.nanorc' with syntax highlighting.•••* gnu/system/shadow.scm (default-skeletons): Add ".nanorc". Ludovic Courtès
2018-04-04gnu: Add perl-statistics-basic.•••* gnu/packages/perl.scm (perl-statistics-basic): New variable. Roel Janssen
2018-04-04gnu: Add perl-time-hires.•••* gnu/packages/perl.scm (perl-time-hires): New variable. Roel Janssen
2018-04-04gnu: Add xapers•••* gnu/packages/search.scm (xapers): New variable. Signed-off-by: Eric Bavier <bavier@member.fsf.org> Adam Massmann
2018-04-04gnu: Add python-pybtex•••* gnu/packages/python.scm (python-pybtex): New variable. Signed-off-by: Eric Bavier <bavier@member.fsf.org> Adam Massmann
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