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2020-11-13gnu: python-pysam: Update to version 0.16.0.1.Maxim Cournoyer
The check phase was failing with: starting phase `check' make: Entering directory '...drv-0/python-pysam-0.15.1-checkout/tests/pysam_data' samtools faidx ex1.fa samtools import ex1.fa.fai ex1.sam.gz ex1.bam [main] "samtools import" has been removed. Please use "samtools view" instead. make: *** [Makefile:56: ex1.bam] Error 1 * gnu/packages/bioinformatics.scm (python-pysam): Update to version 0.16.0.1. [phases]{check}: Delete a couple more failing test files. [native-inputs]: Add python-pytest.
2020-11-12gnu: python-flask-basicauth: Fix indentation.Maxim Cournoyer
* gnu/packages/python-web.scm (python-flask-basicauth): Fix indentation.
2020-11-12gnu: python-flask-basicauth: Fix build.Maxim Cournoyer
* gnu/packages/python-web.scm (python-flask-basicauth)[phases]: Add a 'fix-imports phase.
2020-11-10vm: expression->derivation-in-linux-vm: Run in a UTF-8 locale.Ludovic Courtès
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Add calls to 'setenv' and 'setlocale'.
2020-11-10gnu: audiofile: Shorten patch file names.Ludovic Courtès
At least 'audiofile-division-by-zero-BlockCodec-runPull.patch' could end up not being included in a tarball. * gnu/packages/patches/audiofile-Check-the-number-of-coefficients.patch: Rename to... * gnu/packages/patches/audiofile-check-number-of-coefficients.patch: ... this. * gnu/packages/patches/audiofile-division-by-zero-BlockCodec-runPull.patch: Rename to... * gnu/packages/patches/audiofile-division-by-zero.patch: ....this. * gnu/packages/patches/audiofile-signature-of-multiplyCheckOverflow.patch: Rename to... * gnu/packages/patches/audiofile-function-signature.patch: ... this. * gnu/packages/patches/audiofile-Fix-multiply-overflow-sfconvert.patch: Rename to.... * gnu/packages/patches/audiofile-multiply-overflow.patch: ... this. * gnu/packages/patches/audiofile-Fix-overflow-in-MSADPCM-decodeSam.patch: Rename to... * gnu/packages/patches/audiofile-overflow-in-MSADPCM.patch: ... this. * gnu/packages/audio.scm (audiofile)[source]: Adjust accordingly. * gnu/local.mk (dist_patch_DATA): Likewise.
2020-11-10gnu: python2-pygobject@2: Shorten patch file name.Ludovic Courtès
The file would not be included in the tarball produced by "make dist" because its name was too long. * gnu/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch: Rename to... * gnu/packages/patches/python2-pygobject-2-deprecation.patch: ... this. * gnu/packages/glib.scm (python2-pygobject-2)[source]: Adjust accordingly. * gnu/local.mk (dist_patch_DATA): Likewise.
2020-11-10vm: 'system-qemu-image' forces the use of i386/BIOS GRUB.Ludovic Courtès
Fixes <https://bugs.gnu.org/44511>. Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>. * gnu/system/vm.scm (system-qemu-image): Add 'bootloader' field to OS.
2020-11-09machine: ssh: Do not import the host (guix config).Ludovic Courtès
* gnu/machine/ssh.scm (machine-boot-parameters): Use 'make-config.scm' for (guix config).
2020-11-09services: nginx: Re-introduce server-names-hash-bucket-size.Julien Lepiller
This was unintentionally removed in 00014f769233facebd84f13a00b10032a22cb440. * gnu/services/web.scm (default-nginx-config): Re-introduce processing of server-names-hash-bucket-size option.
2020-11-08installer: parted: Add debug output.Mathieu Othacehe
* gnu/installer/parted.scm (mkpart): Log partition creation.
2020-11-08gnu: cross-base: Move glibc Hurd patches to 'inputs'.Ludovic Courtès
Fixes "guix build --target=i586-pc-gnu bootstrap-tarballs". * gnu/packages/cross-base.scm (cross-libc): Move Hurd patches from 'native-inputs' to 'inputs'.
2020-11-08image: Offload "disk-image" derivations.Ludovic Courtès
This is a followup to 99efa804bd6df5de4760ec5974ed2297f1746366. * gnu/system/image.scm (system-disk-image): Pass #:local-build? #f to 'computed-file'.
2020-11-08installer: Limit listbox height.Mathieu Othacehe
Fixes: <https://issues.guix.gnu.org/44428>. * gnu/installer/newt.scm (init): Print screen size. * gnu/installer/newt/page.scm (default-listbox-height): New variable. (run-listbox-selection-page): Use it. * gnu/installer/newt/wifi.scm (wifi-listbox-height): Ditto. * gnu/installer/newt/network.scm (run-technology-page): Set the maximum listbox height to 5. * gnu/installer/newt/ethernet.scm (run-ethernet-page): Ditto. * gnu/installer/newt/final.scm (run-config-display-page): Change listbox height. * gnu/installer/newt/partition.scm (run-disk-page): Ditto. * gnu/installer/newt/welcome.scm (display-logo?): New procedure. (run-menu-page): Use it. * gnu/installer/steps.scm (%configuration-file-width): Remove it.
2020-11-07tests: nfs-root-fs: Use the right store file name.Ludovic Courtès
* gnu/tests/nfs.scm (run-nfs-root-fs-test): Pass "nfs-root-fs-test" as the first argument to 'gexp->derivation'.
2020-11-07tests: git-http: Avoid race condition.Ludovic Courtès
* gnu/tests/version-control.scm (run-git-http-test)[test]("fcgiwrap listens"): New test.
2020-11-07gnu: libffi: Fix building on powerpc.Efraim Flashner
* gnu/packages/libffi.scm (libffi)[inputs]: New field. [arguments]: Add 'apply-patch' phase when targeting PowerPC. * gnu/packages/patches/libffi-3.3-powerpc-fixes.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2020-11-06tests: mpd: Remove race condition; use default MPD configuration.Ludovic Courtès
* gnu/tests/audio.scm (%mpd-os): Use the default 'mpd-configuration'. (run-mpd-test)[test]("mpd listening"): New test. ("mpc connect"): Use 'system*' and 'test-equal'.
2020-11-06services: mpd: Fix daemon startup.Ludovic Courtès
Until now it would wait for a PID file that'd never come. * gnu/services/audio.scm (mpd-shepherd-service): Add 'requirement'. Remove #:pid-file from 'start'. (mpd-service-activation): Create the ".mpd" directory since that's what the daemon expects.
2020-11-06services: mpd: Always create the "mpd" user account.Ludovic Courtès
* gnu/services/audio.scm (%mpd-accounts): New variable. (mpd-service-type)[extensions]: Add ACCOUNT-SERVICE-TYPE extension.
2020-11-06tests: docker-system: Increase VM memory.Ludovic Courtès
The test was failing with ENOSPC. * gnu/tests/docker.scm (run-docker-system-test)[vm]: Increase 'memory-size'. (%test-docker-system): Change 'locale-libcs' for the OS passed to 'system-docker-image'.
2020-11-06services: mpd: Do not eagerly look for a user.Maxim Cournoyer
Running 'guix system search mpd' would throw a backtrace because the mpd-shepherd-service service start Gexp contained an unquoted call to 'getpwnam', which would look for a missing 'mpd' user and fail. * gnu/services/audio.scm (mpd-shepherd-service): gexp-unquote only the relevant variable rather than the whole expression.
2020-11-05gnu: chromium: Silent 'local-file' warning.Ludovic Courtès
This is a followup to fddc87063231f8f9aa22bbbc5bca4a46b9bbf004. * gnu/packages/chromium.scm (%guix-patches): Use 'assume-valid-file-name'.
2020-11-05services: Remove imports of (ice-9 …) modules.Ludovic Courtès
* gnu/services/monitoring.scm (zabbix-server-activation): Remove (ice-9 rdelim) from the imported modules. (zabbix-agent-activation): Likewise. * gnu/tests/mail.scm (run-exim-test)[test]: Remove (ice-9 ftw) from the imported modules.
2020-11-05shepherd: Remove dependency on (guix utils).Ludovic Courtès
Since commit 8ce6f4dc2879919c12bc76a2f4b01200af97e019, importing this module in a gexp would pull in (guix config) from the host, thereby leading to non-reproducible derivations. Users in (gnu services ...) do not expect that so simply remove the (guix utils) dependency for now. * gnu/build/shepherd.scm (fork+exec-command/container)[strip-pid]: New procedure. Use it instead of 'strip-keyword-arguments'.
2020-11-05image: Error out when passed an unsupported partition type.Ludovic Courtès
* gnu/build/image.scm (make-partition-image): Use 'raise' instead of 'format' when TYPE is not supported. (convert-disk-image): Remove unneeded 'begin'.
2020-11-05gnu: dump1090: Update to 4.0.Leo Famulari
* gnu/packages/radio.scm (dump1090): Update to 4.0.
2020-11-05gnu: virt-viewer: Enable VNC support.Tobias Geerinckx-Rice
* gnu/packages/spice.scm (virt-viewer)[inputs]: Add gtk-vnc.
2020-11-05gnu: praat: Update to 6.1.30.Tobias Geerinckx-Rice
* gnu/packages/language.scm (praat): Update to 6.1.30.
2020-11-05gnu: python-audioread: Update to 2.1.9.Tobias Geerinckx-Rice
* gnu/packages/mp3.scm (python-audioread): Update to 2.1.9.
2020-11-05gnu: toxic: Update to 0.8.4.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (toxic): Update to 0.8.4.
2020-11-05gnu: libnice: Update to 0.1.18.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (libnice): Update to 0.1.18. [arguments]: Add a new ‘disable-failing-test’ phase.
2020-11-05gnu: lldpd: Omit static library.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (lldpd)[arguments]: Add ‘--disable-static’ to the #:configure-flags.
2020-11-05gnu: lldpd: Update to 1.0.7.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (lldpd): Update to 1.0.7.
2020-11-05gnu: fldigi: Update to 4.1.15.Tobias Geerinckx-Rice
* gnu/packages/radio.scm (fldigi): Update to 4.1.15.
2020-11-05gnu: python-sphinx-intl: Update to 2.0.1.Tobias Geerinckx-Rice
* gnu/packages/sphinx.scm (python-sphinx-intl): Update to 2.0.1.
2020-11-05gnu: oil: Update to 0.8.3.Tobias Geerinckx-Rice
* gnu/packages/shells.scm (oil): Update to 0.8.3.
2020-11-05gnu: xl2tpd: Update to 1.3.16.Tobias Geerinckx-Rice
* gnu/packages/vpn.scm (xl2tpd): Update to 1.3.16.
2020-11-05gnu: i3-gaps: Update to 4.18.3.Tobias Geerinckx-Rice
* gnu/packages/wm.scm (i3-gaps): Update to 4.18.3.
2020-11-05gnu: i3-wm: Update to 4.18.3.Tobias Geerinckx-Rice
* gnu/packages/wm.scm (i3-wm): Update to 4.18.3.
2020-11-05gnu: vera: Update to 1.24.Tobias Geerinckx-Rice
* gnu/packages/dictionaries.scm (vera): Update to 1.24. [arguments]: Replace problematic (non-)character.
2020-11-05gnu: php: Move a test disablement.Tobias Geerinckx-Rice
* gnu/packages/php.scm (php)[arguments]: Disable bug73837.phpt under a more appropriate comment section.
2020-11-05gnu: colord: Update to 1.4.5.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (colord): Update to 1.4.5.
2020-11-05gnu: zeitgeist: Update to 1.0.3.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (zeitgeist): Update to 1.0.3.
2020-11-05gnu: gpxsee: Update to 7.35.Tobias Geerinckx-Rice
* gnu/packages/gps.scm (gpxsee): Update to 7.35.
2020-11-05gnu: wavemon: Update to 0.9.2.Tobias Geerinckx-Rice
* gnu/packages/hardware.scm (wavemon): Update to 0.9.2. [source]: Add two bonus upstream commits as patches.
2020-11-05gnu: python-djangorestframework: Update to 3.12.1.Marius Bakke
* gnu/packages/django.scm (python-djangorestframework): Update to 3.12.1.
2020-11-05gnu: python-django@2.2: Update to 2.2.17.Marius Bakke
* gnu/packages/django.scm (python-django-2.2): Update to 2.2.17.
2020-11-05gnu: python-django: Update to 3.1.3.Marius Bakke
* gnu/packages/django.scm (python-django): Update to 3.1.3.
2020-11-05gnu: ungoogled-chromium: Fix hardware acceleration.Marius Bakke
* gnu/packages/chromium.scm (ungoogled-chromium)[arguments]: Patch in absolute file name of libGL.so, and install Chromiums own libEGL.so and libGLESv2.so.
2020-11-05gnu: ungoogled-chromium: Update to 86.0.4240.183-0.b68e17f [security fixes].Marius Bakke
This fixes CVE-2020-16004, CVE-2020-16005, CVE-2020-16006, CVE-2020-16007, CVE-2020-16008, CVE-2020-16009, and CVE-2020-16011. * gnu/packages/chromium.scm (%ungoogled-revision, %ungoogled-origin): Update to b68e17f. (ungoogled-chromium): Update to 86.0.4240.183.
generated by cgit v1.2.3 (git 2.46.2) at 2024-11-16 18:34:42 +0000