| Age | Commit message (Expand) | Author |
|---|
| 2021-04-13 | gnu: openconnect-sso: Update to 0.7.2....* gnu/packages/vpn.scm (openconnect-sso): Update to 0.7.2.
[arguments]: Remove 'adjust-package-version-requirements phase.
| Efraim Flashner |
| 2021-04-13 | gnu: Add r-hmm....* gnu/packages/cran.scm (r-hmm): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Roel Janssen |
| 2021-04-13 | gnu: python-tinycss2: Enable tests....* gnu/packages/python-web.scm (python-tinycss2)[source]: Fetch from git
repository to include tests.
[arguments]: Build from source with flit.
[native-inputs]: Add python-flit, python-pytest, python-pytest-cov,
python-pytest-flake8, and python-pytest-isort.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-ipywidgets: Update to 7.6.3....* gnu/packages/python-xyz.scm (python-ipywidgets): Update to 7.6.3.
[propagated-inputs]: Add python-ipython, python-jupyterlab-widgets, and
python-nbformat.
[native-inputs]: Remove python-nose; add python-mock and ptyhon-pytest-cov.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-widgetsnbextension: Remove unnecessary inputs....* gnu/packages/python-xyz.scm (python-widgetsnbextension)[propagated-inputs]:
Remove python-argon2-cffi, python-ipykernel, and python-terminado.
[native-inputs]: Remove python-certifi and python-nose.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-jupyterlab-widgets....* gnu/packages/jupyter.scm (python-jupyterlab-widgets): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-jupyter-packaging....* gnu/packages/jupyter.scm (python-jupyter-packaging): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-deprecation....* gnu/packages/python-xyz.scm (python-deprecation): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-testpath: Update to 0.4.4....* gnu/packages/check.scm (python-testpath): Update to 0.4.4.
[arguments]: Build the package as intended with flit.
[native-inputs]: Add python-flit.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-flit: Update to 3.2.0....* gnu/packages/python-xyz.scm (python-flit): Update to 3.2.0.
[source]: Fetch from git repository to include flit_core.
[arguments]: Add phases to bootstrap the build.
[propagated-inputs]: Add python-pytoml and python-toml.
[native-inputs]: Add python-docutils, python-responses,
python-pygments-github-lexers, python-pytest, python-pytest-cov,
python-sphinx, python-sphinxcontrib-github-alt, and python-testpath.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-sphinxcontrib-github-alt....* gnu/packages/sphinx.scm (python-sphinxcontrib-github-alt): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-requests-unixsocket....* gnu/packages/python-web.scm (python-requests-unixsocket): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-pygments-github-lexers....* gnu/packages/python-xyz.scm (python-pygments-github-lexers): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-pytoml....* gnu/packages/python-build.scm (python-pytoml): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Remove python2-ipykernel....* gnu/packages/python-xyz.scm (python2-ipykernel): Remove variable.
(python-ipykernel)[properties]: Remove python2-variant.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Remove python2-jupyter-console....* gnu/packages/python-xyz.scm (python2-jupyter-console): Remove variable.
(python-jupyter-console)[properties]: Remove python2-variant.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Remove python2-jupyter-core....* gnu/packages/python-xyz.scm (python2-jupyter-core): Remove variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Remove python2-ipyparallel....* gnu/packages/python-xyz.scm (python2-ipyparallel): Remove variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Remove python2-matplotlib-documentation....* gnu/packages/python-xyz.scm (python2-matplotlib-documentation): Remove variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-nbformat: Update to 5.1.3....* gnu/packages/python-xyz.scm (python-nbformat): Update to 5.1.3.
[arguments]: Remove to enable tests.
[native-inputs]: Add python-pytest.
[properties]: Add python2-variant.
(python2-nbformat): Keep at version 4.4.0; override version and source field.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-nbconvert: Update to 6.0.7....* gnu/packages/python-xyz.scm (python-nbconvert): Update to 6.0.7.
[arguments]: Remove configure flags, enable tests, override check phase.
[propagated-inputs]: Add python-defusedxml, python-nbclient,
python-pandocfilters, python-jupyterlab-pygments, and python-testpath.
[properties]: Add python2-variant.
(python2-nbconvert): Override version, source, arguments, and
propagated-inputs.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-nbclient....* gnu/packages/jupyter.scm (python-nbclient): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-jupyterlab-pygments....* gnu/packages/jupyter.scm (python-jupyterlab-pygments): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: Add python-nest-asyncio....* gnu/packages/python-xyz.scm (python-nest-asyncio): New variable.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-notebook: Update inputs....* gnu/packages/python-xyz.scm (python-notebook)[propagated-inputs]: Add
python-argon2-cffi, python-ipykernel, python-ipython-genutils, python-jinja2,
python-jupyter-client, python-pyzmq, python-tornado-6, and python-traitlets.
[native-inputs]: Remove python-nose and python-sphinx; add python-coverage,
python-nbval, python-pytest, python-pytest-cov, and
python-requests-unixsocket.
[arguments]: Use pytest instead of nosetests.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-notebook: Update to 6.3.0....* gnu/packages/python-xyz.scm (python-notebook): Update to 6.3.0.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-widgetsnbextension: Add missing inputs....* gnu/packages/python-xyz.scm (python-widgetsnbextension)[propagated-inputs]:
Add python-argon2-cffi and python-terminado.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-ipykernel: Update to 5.5.3....* gnu/packages/python-xyz.scm (python-ipykernel): Update to 5.5.3.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-jupyter-client: Update to 6.1.12....* gnu/packages/python-xyz.scm (python-jupyter-client): Update to 6.1.12.
[propagated-inputs]: Add python-dateutil and python-tornado-6.
[native-inputs]: Add python-pytest.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-jupyter-core: Update to 4.7.1....* gnu/packages/python-xyz.scm (python-jupyter-core): Update to 4.7.1.
| Ricardo Wurmus |
| 2021-04-13 | gnu: python-terminado: Update to 0.9.4....* gnu/packages/python-web.scm (python-terminado): Update to 0.9.4.
[propagated-inputs]: Replace python-tornado with python-tornado-6.
[native-inputs]: Replace python-nose with python-pytest.
[home-page]: Follow redirect.
[arguments]: Update check phase.
| Ricardo Wurmus |
| 2021-04-13 | gnu: esbuild: Update to 0.11.9....* gnu/packages/web.scm (esbuild): Update to 0.11.9.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Ryan Prior |
| 2021-04-13 | gnu: visidata: Update to 2.4....* gnu/packages/visidata.scm (visidata): Update to 2.4.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Ryan Prior |
| 2021-04-13 | gnu: gnu-standards: Update to 2020-11-25....* gnu/packages/gnu-doc.scm (gnu-standards): Update to 2020-11-25.
[source]: Make file-name more descriptive. Use version variable for
revision.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Morgan Smith |
| 2021-04-13 | gnu: Add texlive-xcharter....* gnu/packages/tex.scm: New variable.
| Paul Garlick |
| 2021-04-13 | tests: halt: Fix it....This fixes: <https://issues.guix.gnu.org/47727>. The OCR prompt detection is
failing, so remove it altogether. It looks like the test doesn't need the
prompt detection delay to work properly.
* gnu/tests/base.scm (run-halt-test): Remove failing OCR detection.
| Mathieu Othacehe |
| 2021-04-12 | services: postgresql: Change service default socket directory....Fixes <https://bugs.gnu.org/46737>.
PostgreSQL running with a different socket directory to the default one in the
package itself breaks some services, this commit restores the previous
behaviour where PostgreSQL by default will run with a socket directory that
matches the default used by PostgreSQL packaged for Guix.
Switching to a different default value can happen, but only alongside changing
the PostgreSQL package.
* gnu/services/databases.scm (<postgresql-config-file>)[socket-directory]:
Change default to #false.
* doc/guix.texi (Database Services): Update documentation, and specify a
different value for disabling connections via sockets.
* gnu/tests/guix.scm (%guix-data-service-os): Use default PostgreSQL
behaviour.
* gnu/tests/monitoring.scm (%zabbix-os): Likewise.
* gnu/tests/web.scm (patchwork-os): Likewise.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Christopher Baines |
| 2021-04-12 | gnu: guile-picture-language: Update to 0.0.1-5.a1322bf....* gnu/packages/guile-xyz.scm (guile-picture-language): Update to
0.0.1-5.a1322bf.
| Ricardo Wurmus |
| 2021-04-12 | services: ipfs: Tweak description....* gnu/services/networking.scm (ipfs-service-type)[description]: Avoid
abbreviation.
| Ludovic Courtès |
| 2021-04-12 | gnu: tests: Test basic funtionality of the IPFS service....It is tested whether the IPFS service listens
at the gateway and API ports and whether it
is possible to upload and download a bytevector.
* gnu/tests/networking.scm
(%ipfs-os): New variable.
(run-ipfs-test): New procedure.
(%test-ipfs): New system test.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Maxime Devos |
| 2021-04-12 | tests: Support package extensions in the backdoor REPL....* gnu/tests.scm
(<marionette-configuration>): Add 'extensions' field.
(marionette-shepherd-service): Honour the field.
(with-import-modules-and-extensions): Define a combination
of 'with-import-modules' and 'with-extensions'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Maxime Devos |
| 2021-04-12 | services: Add ipfs-service-type...* gnu/services/networking.scm (ipfs-service-type)
(%ipfs-home-mapping, %ipfs-environment)
(%ipfs-accounts, %ipfs-home): New variables.
(ipfs-configuration, ipfs-configuration?)
(ipfs-configuration-package, ipfs-configuration-gateway)
(ipfs-configuration-api, ipfs-shepherd-service)
(ipfs-binary, %ipfs-activation): New procedures.
* doc/guix.texi (Networking Services): Document it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Maxime Devos |
| 2021-04-12 | gnu: racket: Don't inject store paths into Racket files....Apparently, during grafting, Guix can somehow mangle compiled
Racket CS files (.zo) such that Racket will refuse to load them.
(Maybe it has something to do with compression?)
So, we stop patching Racket sources with absolute paths to store
files (i.e. for foreign libraries to dlopen).
Instead, we put them in a data file that doesn't get compiled or,
in one case, embed it in C.
Fixes https://issues.guix.gnu.org/47064
* gnu/packages/patches/racket-sh-via-rktio.patch: New file.
Adds a special case at the C level, controlled by a preprocessor macro,
to handle attempts to execute "/bin/sh".
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/scheme.scm (racket)[source](patches): Apply it.
(racket)[arguments](#:configure-flags): Add the CPP flag to enable it.
(racket)[arguments](#:modules): Use srfi-1.
(racket)[arguments](#:phases): Remove 'patch-/bin/sh and 'pre-configure.
Change 'pre-configure-minimal to just change directory.
Add 'patch-config.rktd-lib-search-dirs after 'build and before 'install
to configure Racket's "lib-search-dirs".
(racket, racket-minimal)[inputs]: Add bash-minimal as an explicit input.
(racket-minimal)[source]: Adjust to inherit patches from racket.
(racket-minimal)[arguments]: Inherit from racket: changes no longer needed.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Philip McGrath |
| 2021-04-12 | gnu: Add r-txdb-dmelanogaster-ucsc-dm6-ensgene....* gnu/packages/bioconductor.scm (r-txdb-dmelanogaster-ucsc-dm6-ensgene):
New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| hli |
| 2021-04-12 | services: Support DELETE in MODIFY-SERVICES macro....* gnu/services.scm (%modify-service): Add clause for DELETE syntax.
(modify-services): Use FILTER-MAP; adjust docstring.
* doc/guix.texi (System Services): Mention alternative syntax.
(X Window): Use MODIFY-SERVICES syntax.
| Ricardo Wurmus |
| 2021-04-12 | gnu: Add cl-bodge-queue....* gnu/packages/lisp-xyz.scm (sbcl-bodge-queue, cl-bodge-queue,
ecl-bodge-queue): New variables.
Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
| Adam Kandur |
| 2021-04-12 | gnu: hydrogen: Update to 1.0.2....* gnu/packages/music.scm (hydrogen): Update to 1.0.2.
| Nicolas Goaziou |
| 2021-04-12 | gnu: Add openvdb....* gnu/packages/graphics.scm (openvdb): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Ekaitz Zarraga |
| 2021-04-12 | gnu: Add texlive-newtx....* gnu/packages/tex.scm: New variable.
| Paul Garlick |
| 2021-04-12 | gnu: java-eclipse-jetty-util: Update to 9.4.39 [security fixes]....Fixes CVE-2021-28165 - jetty server high CPU when client send data length >
17408, CVE-2021-28164 - Normalize ambiguous URIs and CVE-2021-28163 - Exclude
webapps directory from deployment scan.
* gnu/packages/java.scm (java-eclipse-jetty-util): Update to 9.4.39.
(java-eclipse-jetty-util-ajax): New variable.
(java-eclipse-jetty-util, java-eclipse-jetty-io, java-eclipse-jetty-http)
(java-eclipse-jetty-jmx, java-eclipse-jetty-server)
(java-eclipse-jetty-security, java-eclipse-jetty-servlet)
(java-eclipse-jetty-xml, java-eclipse-jetty-webapp): Disable tests.
[native-inputs]: Remove test dependencies.
| Julien Lepiller |
