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2020-10-08gnu: gmsh: Update to 4.6.0.zimoun
Gmsh bundles METIS 5 released with Apache License 2.0 since upstream commit eaff7f6477fe876991615cfa4b5832bd5f12994b. Instead, Gmsh is linked with the package 'metis'. * gnu/packages/maths.scm (gmsh): Update to 4.6.0. (propagated-inputs): Replace 'opencascade-oce' by 'opencascade-occt', add 'metis'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-10-08gnu: kdeconnect: Fix launching kdeconnect-app.Efraim Flashner
* gnu/packages/kde.scm (kdeconnect)[inputs]: Add qtgraphicaleffects, qtquickcontrols, qtquickcontrols2.
2020-10-07gnu: Add emacs-windsize.Tomás Ortín Fernández
* gnu/packages/emacs-xyz.scm (emacs-windsize): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-10-07gnu: giac: Update to 1.6.0-25.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.6.0-25. [native-inputs]: Add hevea.
2020-10-07services: Fix gdm-autologin pam service.Alex Griffin
* gnu/services/xorg.scm (gdm-pam-service): Mark pam_gdm.so optional.
2020-10-07gnu: htslib: Enable support for custom URI schemes.Roel Janssen
* gnu/packages/bioinformatics.scm (htslib)[arguments]: Enable support for custom URIs.
2020-10-07gnu: eolie: Update to 0.9.99.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (eolie): Update to 0.9.99.
2020-10-07gnu: nano: Update to 5.3.Tobias Geerinckx-Rice
* gnu/packages/nano.scm (nano): Update to 5.3.
2020-10-07gnu: filezilla: Run the test.Tobias Geerinckx-Rice
* gnu/packages/ftp.scm (filezilla)[native-inputs]: Add cppunit.
2020-10-07gnu: libfilezilla: Don't build static library.Tobias Geerinckx-Rice
* gnu/packages/ftp.scm (libfilezilla)[arguments]: Add ‘--disable-static’ to #:configure-flags.
2020-10-07gnu: filezilla, libfilezilla: Update to 3.50.0, 0.24.1.Tobias Geerinckx-Rice
* gnu/packages/ftp.scm (libfilezilla): Update to 0.24.1. [native-inputs]: Add gettext-minimal. [inputs]: Add gnutls. (filezilla): Update to 3.50.0.
2020-10-07gnu: cuirass: Update to 0.0.1-51.cb2c4e3.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-51.cb2c4e3.
2020-10-07gnu: Add texlive-fpl.Paul Garlick
* gnu/packages/tex.scm (texlive-fpl): New variable.
2020-10-07gnu: Add cl-xmls.Adam
* gnu/packages/lisp-xyz.scm (sbcl-xmls, cl-xmls, ecl-xmls): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-10-07gnu: Add cl-lambda-fiddle.Adam
* gnu/packages/lisp-xyz.scm (sbcl-lambda-fiddle, cl-lambda-fiddle, ecl-lambda-fiddle): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-10-07gnu: entr: Cross-compile.Tobias Geerinckx-Rice
* gnu/packages/entr.scm (entr)[arguments]: Use CC-FOR-TARGET. Use INPUTS instead of WHICH. [inputs]: Add non-native bash and coreutils packages.
2020-10-07gnu: entr: Update to 4.6.Tobias Geerinckx-Rice
* gnu/packages/entr.scm (entr): Update to 4.6.
2020-10-07gnu: ddcutil: Update to 0.9.9.Tobias Geerinckx-Rice
* gnu/packages/hardware.scm (ddcutil): Update to 0.9.9.
2020-10-06gnu: Add xnotify.Oleg Pykhalov
* gnu/packages/wm.scm (xnotify): New variable.
2020-10-06gnu: Add emacs-ob-sclang.Pierre Langlois
Remove emacs-org-contrib's dependency on SuperCollider by extracting ob-sclang.el into its own package. * gnu/packages/emacs-xyz.scm (emacs-org-contrib)[source]: Add snippet that deletes ob-sclang.el. [propagated-inputs]: Remove emacs-scel. (emacs-ob-sclang): New variable.
2020-10-06gnu: emacs-geiser: Update to 0.12.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.12.
2020-10-06gnu: texlive-mathpazo: Include virtual font files.Paul Garlick
* gnu/packages/tex.scm (texlive-mathpazo)[inherit]: Add directory.
2020-10-06gnu: gnumeric: Update to 1.12.48.Tobias Geerinckx-Rice
This brings Python 3 support & fixes building against goffice@0.10.48. * gnu/packages/gnome.scm (gnumeric): Update to 1.12.48. [inputs]: Replace python-2 and python2-gobject with python and python-pygobject, respectively.
2020-10-06gnu: perl-digest-md5: Update to 2.58.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-digest-md5): Update to 2.58. [arguments]: Remove field.
2020-10-06gnu: knot: Enable XDP.Tobias Geerinckx-Rice
* gnu/packages/dns.scm (knot)[source]: Snip out bundled libbpf sources. [arguments]: Add ‘--enable-xdp=auto’ to #:configure-flags. Add a ‘link-missing-libbpf-dependency’ phase. [inputs]: Add libbpf and libelf.
2020-10-06gnu: knot: Fix typo.Tobias Geerinckx-Rice
* gnu/packages/dns.scm (knot)[arguments]: Fix a typo in the #:configure-flags.
2020-10-06gnu: knot: Fix test failure on aarch64-linux.Simon South
* gnu/packages/dns.scm (knot)[source]: Apply patch from upstream that helps ensure the "test_net_shortwrite" test suite can complete regardless of platform or configuration. * gnu/packages/patches/knot-test_net_shortwrite-ensure-connection.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-10-06gnu: knot: Build & install the Info manual.Simon South
* gnu/packages/dns.scm (knot)[arguments]: Add "build-info" and "install-info" phases. [native-inputs]: Add texinfo and python-sphinx. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-10-06gnu: knot: Enable DNS-over-HTTPS support in kdig.Simon South
* gnu/packages/dns.scm (knot)[inputs]: Add nghttp2:lib. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-10-06gnu: Add texlive-mathpazo.Paul Garlick
* gnu/packages/tex.scm (texlive-mathpazo): New variable.
2020-10-06gnu: vim: Update to 8.2.1805.Tobias Geerinckx-Rice
* gnu/packages/vim.scm (vim): Update to 8.2.1805.
2020-10-06gnu: pipewire: Update to 0.3.13.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (pipewire): Update to 0.3.13.
2020-10-06gnu: praat: Update to 6.1.26.Tobias Geerinckx-Rice
* gnu/packages/language.scm (praat): Update to 6.1.26.
2020-10-06gnu: libtsm: Remove bundled libxkbcommon header.Tobias Geerinckx-Rice
* gnu/packages/terminals.scm (libtsm)[source]: Snip xkbcommon-keysyms.h.
2020-10-06gnu: libtsm: Make all inputs native.Tobias Geerinckx-Rice
* gnu/packages/terminals.scm (libtsm)[inputs]: Move check & libxkbcommon from here… [native-inputs]: …to here.
2020-10-06gnu: stockfish: Update to 12.Michael Rohleder
* gnu/packages/games.scm (stockfish): Update to 12. [inputs]: Add fetching of the official neural network file. [arguments]: Add phase 'copy-net to copy this file and embed it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: r-gqtlbase: Update to 1.20.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.20.4.
2020-10-06gnu: r-rhdf5: Update to 2.32.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.3.
2020-10-06gnu: r-biocstyle: Update to 2.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.16.1.
2020-10-06gnu: r-bgx: Update to 1.54.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.54.1.
2020-10-06gnu: r-xcms: Update to 3.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.10.2.
2020-10-06gnu: r-atacseqqc: Update to 1.12.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.12.5.
2020-10-06gnu: r-gosemsim: Update to 2.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.14.2.
2020-10-06gnu: r-karyoploter: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.14.1.
2020-10-06gnu: r-diffbind: Update to 2.16.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.16.2.
2020-10-06gnu: sbcl-cl-base64: Declare a source file-name.Efraim Flashner
* gnu/packages/lisp-xyz.scm (sbcl-cl-base64)[source]: Add file-name field.
2020-10-06gnu: memkind: Declare a source file-name.Efraim Flashner
* gnu/packages/disk.scm (memkind)[source]: Add file-name field.
2020-10-06gnu: python-tox: Update to 3.20.0.Joseph LaFreniere
* gnu/packages/python-xyz.scm (python-tox): Update to 3.20.0. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: Add emacs-python-black.Joseph LaFreniere
* gnu/packages/emacs-xyz.scm (emacs-python-black): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06gnu: Add python-black-macchiato.Joseph LaFreniere
* gnu/packages/python-xyz.scm (python-black-macchiato): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
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