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2020-03-02gnu: r-seqminer: Update to 8.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 8.0.
2020-03-02gnu: ecl-clunit: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/lisp-xyz.scm (ecl-clunit)[home-page]: Use HTTPS.
2020-03-02gnu: mapnik: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/geo.scm (mapnik)[home-page]: Use HTTPS.
2020-03-02gnu: python-rq: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (python-rq)[home-page]: Use HTTPS.
2020-03-02gnu: java-plexus-interpolation: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-plexus-interpolation)[home-page]: Use HTTPS.
2020-03-02gnu: amsynth: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/music.scm (amsynth)[home-page]: Use HTTPS.
2020-03-02gnu: pootle: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/django.scm (pootle)[home-page]: Use HTTPS.
2020-03-02gnu: muse-sequencer: Update home page.Tobias Geerinckx-Rice
* gnu/packages/music.scm (muse-sequencer)[home-page]: Follow (HTTPS) redirection.
2020-03-02gnu: opensmtpd: Support ECDSA certificates.Tobias Geerinckx-Rice
The required libressl version is now stable and more featureful than openssl. * gnu/packages/mail.scm (opensmtpd)[inputs]: Replace openssl with libressl.
2020-03-02gnu: libressl: Update to 3.0.2.Tobias Geerinckx-Rice
* gnu/packages/tls.scm (libressl): Update to 3.0.2.
2020-03-02gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.10.0.Tobias Geerinckx-Rice
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Update to 3.10.0.
2020-03-02gnu: emacs-modus-themes: Update to 0.6.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 0.6.0.
2020-03-02gnu: Syncthing: Fix installation of the 'util' package output.Leo Famulari
* gnu/packages/syncthing.scm (syncthing)[arguments]: Adjust the 'install' phase.
2020-03-02gnu: librsvg-next: Fix cargo dependency.Efraim Flashner
* gnu/packages/gnome.scm (librsvg-next-source): Don't hardcode patch version of cargo inputs.
2020-03-02gnu: rust-diff-0.1: Update to 0.1.12.Efraim Flashner
* gnu/packages/crates-io.scm (rust-diff-0.1): Update to 0.1.12. [arguments]: Replace rust-quickcheck-0.8 with 0.9 in cargo-development-inputs.
2020-03-02gnu: rust-defmac-0.2: Don't skip build.Efraim Flashner
* gnu/packages/crates-io.scm (rust-defmac-0.2)[arguments]: Don't skip build.
2020-03-02gnu: rust-datetime-0.4: Don't skip build.Efraim Flashner
* gnu/packages/crates-io.scm (rust-datetime-0.4)[arguments]: Don't skip build. Add rust-regex-0.1 to cargo-development-inputs.
2020-03-02gnu: rust-constant-time-eq-0.1: Don't skip build.Efraim Flashner
* gnu/packages/crates-io.scm (rust-constant-time-eq-0.1)[arguments]: Don't skip build.
2020-03-02gnu: debootstrap: Update to 1.0.119.Vincent Legoll
* gnu/packages/debian.scm (debootstrap): Update to 1.0.119. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-03-02gnu: vim: Update to 8.2.0343.Efraim Flashner
* gnu/packages/vim.scm (vim): Update to 8.2.0343.
2020-03-01gnu: r-multiassayexperiment: Update to 1.12.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.3.
2020-03-01gnu: r-cicero: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.2.
2020-03-01gnu: r-mlinterfaces: Update to 1.66.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.4.
2020-03-01gnu: r-biocneighbors: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.4.2.
2020-03-01gnu: r-chippeakanno: Update to 3.20.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.20.1.
2020-03-01gnu: r-hdf5array: Update to 1.14.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.3.
2020-03-01gnu: r-rsamtools: Update to 2.2.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.2.3.
2020-03-01gnu: r-edger: Update to 3.28.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.28.1.
2020-03-01gnu: gwl: Update to 0.2.1.Ricardo Wurmus
* gnu/packages/package-management.scm (gwl): Update to 0.2.1. [arguments]: Add phase "fix-tests".
2020-03-01gnu: r-nloptr: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.2.
2020-03-01gnu: r-gplots: Update to 3.0.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gplots): Update to 3.0.3.
2020-03-01gnu: r-mvtnorm: Update to 1.1-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.1-0.
2020-03-01gnu: r-rlang: Update to 0.4.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.5.
2020-03-01gnu: r-digest: Update to 0.6.25.Ricardo Wurmus
* gnu/packages/statistics.scm (r-digest): Update to 0.6.25.
2020-03-01gnu: r-nnet: Update to 7.3-13.Ricardo Wurmus
* gnu/packages/statistics.scm (r-nnet): Update to 7.3-13.
2020-03-01gnu: r-seurat: Update to 3.1.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.4. [propagated-inputs]: Add r-patchwork.
2020-03-01gnu: r-wgcna: Update to 1.69.Ricardo Wurmus
* gnu/packages/cran.scm (r-wgcna): Update to 1.69. [propagated-inputs]: Remove r-robust.
2020-03-01gnu: r-quanteda: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-quanteda): Update to 2.0.0. [propagated-inputs]: Remove r-lubridate, r-rspectra, and r-spacyr; add r-jsonlite.
2020-03-01gnu: r-gdina: Update to 2.7.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-gdina): Update to 2.7.9.
2020-03-01gnu: r-subplex: Update to 1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-subplex): Update to 1.6.
2020-03-01gnu: r-rpf: Update to 1.0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-rpf): Update to 1.0.3.
2020-03-01gnu: r-dalex: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-dalex): Update to 1.0.1.
2020-03-01gnu: r-styler: Update to 1.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-styler): Update to 1.3.2.
2020-03-01gnu: r-gridgraphics: Update to 0.5-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gridgraphics): Update to 0.5-0.
2020-03-01gnu: r-protviz: Update to 0.6.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-protviz): Update to 0.6.3.
2020-03-01gnu: r-rvcheck: Update to 0.1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-rvcheck): Update to 0.1.8.
2020-03-01gnu: r-rcppannoy: Update to 0.0.15.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.15.
2020-03-01gnu: r-mvabund: Update to 4.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-mvabund): Update to 4.1.3.
2020-03-01gnu: r-manipulatewidget: Update to 0.10.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-manipulatewidget): Update to 0.10.1.
2020-03-01gnu: r-effectsize: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-effectsize): Update to 0.2.0.
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