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2017-11-09gnu: chromaprint: Update to 1.4.2.Leo Famulari
* gnu/packages/mp3.scm (chromaprint): Update to 1.4.2.
2017-11-09gnu: libwnck: Update to 3.24.1.Kei Kebreau
* gnu/packages/gnome.scm (libwnck): Update to 3.24.1.
2017-11-09system: Do not set 'TZ'.Ludovic Courtès
Fixes <https://bugs.gnu.org/29212>. Reported by Diego Nicola Barbato <dnbarbato@posteo.de>. * gnu/system.scm (operating-system-environment-variables): Remove "TZ".
2017-11-09gnu: roary: Update to 3.11.0.Ben Woodcroft
* gnu/packages/bioinformatics.scm (roary): Update to 3.11.0. [inputs]: Add perl-digest-md5-file.
2017-11-08gnu: totem: Enable parallel build.Kei Kebreau
* gnu/packages/gnome.scm (totem)[arguments]: Set #:parallel-build? to #t implicitly.
2017-11-08gnu: tremc: Update to 0.9.0-1.9755b50.Leo Famulari
* gnu/packages/bittorrent.scm (tremc): Update to 0.9.0-1.9755b50. [version]: Use git-version. [source]: Use git-file-name.
2017-11-08gnu: slurm: Update to 16.05.11 [fixes CVE-2017-15566].Leo Famulari
* gnu/packages/parallel.scm (slurm): Update to 16.05.11. [source]: Use the recommended download URL.
2017-11-08gnu: rpm: Update to 4.13.0.2 [fixes CVE-2017-{7500,7501}].Leo Famulari
* gnu/packages/package-management.scm (rpm): Update to 4.13.0.2.
2017-11-08gnu: python-icalendar: Update to 4.0.0.Leo Famulari
* gnu/packages/python.scm (python-icalendar): Update to 4.0.0.
2017-11-08gnu: syncthing: Update to 0.14.40.Leo Famulari
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.40. [inputs]: Add go-github-com-zillode-notify.
2017-11-08gnu: Add go-github-com-zillode-notify.Leo Famulari
* gnu/packages/syncthing.scm (go-github-com-zillode-notify): New variable.
2017-11-08gnu: go-github-com-audriusbutkevicius-kcp-go: Update to 0.0.0-1.8ae5f52.Leo Famulari
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-kcp-go): Update to 0.0.0-1.8ae5f52. [propagated-inputs]: Add go-github-com-tjfoc-gmsm-sm4.
2017-11-08gnu: Add go-github-com-tjfoc-gmsm-sm4.Leo Famulari
* gnu/packages/syncthing.scm (go-github-com-tjfoc-gmsm-sm4): New variable.
2017-11-08services: Add 'lookup-service-types'.Ludovic Courtès
* gnu/services.scm (lookup-service-types): New procedure. * tests/services.scm ("lookup-service-types"): New test.
2017-11-08services: 'fold-service-types' includes (gnu services).Ludovic Courtès
* gnu/services.scm (all-service-modules): New procedure. (fold-service-types): Use it for the default MODULES value.
2017-11-08services: 'fold-service-types' honors its seed.Ludovic Courtès
* gnu/services.scm (fold-service-types): Use SEED instead of '().
2017-11-08gnu: service: Update comment.Hartmut Goebel
* gnu/services/base.scm (guix-activation): Update comment.
2017-11-08install: Use overlayfs instead of unionfs.Hartmut Goebel
I dediced to keep adding /tmp as tmpfs since I was not able to trigger bug while still using unionfs, so I could not verify whether this mount is still needed with overlayfs. Mapping /tmp to tmpfs does not harm, so we are on the save side. * gnu/system/install.scm (make-cow-store): Mount /gnu/store without additional read-only bind-mount, since in overlayfs the "lower" level is always read-only. Add work-dir required by overlayfs. No need to sleep anymore since now using the mount syscall. [unionfs]: Remove now unused function. (%installation-services): Update comment. (installation-os)[file-systems]: Update comment.
2017-11-08build: Use overlayfs instead of unionfs.Hartmut Goebel
Overlayfs is part of the kernel, while unionfs needs FUSE. This also reduces the size of the initrd by ca. 4.3% (487K). * gnu/build/linux-boot.scm (mount-root-file-system): Remove optional parameter "unionfs"; mount using overlayfs instead of unionfs; new directory layout requied by overlayfs; update documentation. [mark-as-not-killable]: Remove now unused function * gnu/system/linux-initrd.scm (file-system-packages): Remove now unused packages "unionfs-fuse/static" and thus unused related 'if'. (linux-modules): Replace "fuse" by "overlay".
2017-11-08gnu: miso: Use pypi-uri.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (miso)[source]: Use pypi-uri.
2017-11-08gnu: Add r-vcd.Ricardo Wurmus
* gnu/packages/cran.scm (r-vcd): New variable.
2017-11-08gnu: Add r-laeken.Ricardo Wurmus
* gnu/packages/cran.scm (r-laeken): New variable.
2017-11-08gnu: fastcap: Use texlive-tiny.Ricardo Wurmus
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace texlive with texlive-tiny. [arguments]: Fix indentation; set HOME in "make-pdf" phase to avoid font errors with texlive-tiny.
2017-11-08gnu: librecad: Fix build.Ricardo Wurmus
* gnu/packages/engineering.scm (librecad)[arguments]: Add phase "patch-boost-error".
2017-11-08gnu: Add r-performanceanalytics.Ricardo Wurmus
* gnu/packages/cran.scm (r-performanceanalytics): New variable.
2017-11-08gnu: Add r-xts.Ricardo Wurmus
* gnu/packages/cran.scm (r-xts): New variable.
2017-11-08gnu: Remove "open source" from descriptions.Ricardo Wurmus
All software in Guix is Free Software. * gnu/packages/aidc.scm (libdmtx)[description]: Remove "open source" string. * gnu/packages/firmware.scm (seabios)[description]: Likewise. * gnu/packages/libupnp.scm (libupnp)[description]: Likewise. * gnu/packages/maths.scm (cubicle)[description]: Likewise. * gnu/packages/mingw.scm (mingw-w64)[description]: Likewise. * gnu/packages/game-development.scm (openmw)[description]: Likewise. [synopsis]: Remove "Free software".
2017-11-08gnu: pcb: Update to 4.0.2.Ricardo Wurmus
* gnu/packages/engineering.scm (pcb): Update to 4.0.2. [arguments]: Add build phase "fix-check-for-display".
2017-11-08gnu: time: Update license.Efraim Flashner
* gnu/packages/time.scm (time)[license]: Change to gpl3+.
2017-11-08gnu: time: Update to 1.8.Efraim Flashner
* gnu/packages/time.scm (time): Update to 1.8. [arguments]: Remove custom 'configure phase.
2017-11-07gnu: Add glusterfs.Ricardo Wurmus
* gnu/packages/file-systems.scm (glusterfs): New variable.
2017-11-07gnu: r-prabclus: Update description.Ricardo Wurmus
* gnu/packages/statistics.scm (r-prabclus)[description]: Fix grammar errors.
2017-11-07gnu: r-fdrtool: Update description.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fdrtool)[description]: Use "@dfn" syntax.
2017-11-07gnu: Add r-bbmle.Ricardo Wurmus
* gnu/packages/cran.scm (r-bbmle): New variable.
2017-11-07gnu: Add r-rsofia.Ricardo Wurmus
* gnu/packages/cran.scm (r-rsofia): New variable.
2017-11-07gnu: Add r-hitc.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-hitc): New variable.
2017-11-07gnu: Add r-fithic.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-fithic): New variable.
2017-11-07gnu: Add r-sushi.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-sushi): New variable.
2017-11-07gnu: Add r-vioplot.Ricardo Wurmus
* gnu/packages/cran.scm (r-vioplot): New variable.
2017-11-07gnu: Add r-sm.Ricardo Wurmus
* gnu/packages/cran.scm (r-sm): New variable.
2017-11-07gnu: Add r-gwascat.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gwascat): New variable.
2017-11-07gnu: Add r-gviz.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gviz): New variable.
2017-11-07gnu: Add r-gqtlstats.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gqtlstats): New variable.
2017-11-07gnu: Add r-hardyweinberg.Ricardo Wurmus
* gnu/packages/cran.scm (r-hardyweinberg): New variable.
2017-11-07gnu: Add r-mice.Ricardo Wurmus
* gnu/packages/cran.scm (r-mice): New variable.
2017-11-07gnu: Add r-ldblock.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-ldblock): New variable.
2017-11-07gnu: Add r-erma.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-erma): New variable.
2017-11-07gnu: Add r-homo-sapiens.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-homo-sapiens): New variable.
2017-11-07gnu: Add r-org-hs-eg-db.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): New variable.
2017-11-07gnu: Add r-snpstats.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-snpstats): New variable.
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